RNA–Protein interactions for RNA: ENST00000555961.1

NEK9-208, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-208ENST00000555961 MT-ND6P03923 174 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 GYPBP06028 91 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 MPC1LP0DKB6 136 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 APELAP0DMC3 54 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 DEFB130BP0DP73 79 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 DEFB130AP0DP74 79 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 RPS3P23396 243 aaKnown RBP eCLIP0.33□□□□□ -2.36
NEK9-208ENST00000555961 CBLN1P23435 193 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 SDC2P34741 201 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 UBE2D1P51668 147 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 CRYBA4P53673 196 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 CAV3P56539 151 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 PSPHP78330 225 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 MIR22HGQ0VDD5 57 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 MSMO1Q15800 293 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 SPINK13Q1W4C9 94 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 VMA21Q3ZAQ7 101 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 SLC48A1Q6P1K1 146 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 CASC2Q6XLA1 102 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 STX12Q86Y82 276 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 WFDC10BQ8IUB3 73 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 KRTAP8-1Q8IUC2 63 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 C4orf33Q8N1A6 199 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 TMEM229BQ8NBD8 167 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 PRELID3AQ96N28 172 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 FAM103A1Q9BTL3 118 aaKnown RBP0.33□□□□□ -2.36
NEK9-208ENST00000555961 OTORQ9NRC9 128 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 SS18L2Q9UHA2 77 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 SMPXQ9UHP9 88 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 MPC1Q9Y5U8 109 aa0.33□□□□□ -2.36
NEK9-208ENST00000555961 PNMA8CA0A1B0GUJ8 204 aa0.32□□□□□ -2.36
NEK9-208ENST00000555961 ODAMA1E959 279 aa0.32□□□□□ -2.36
NEK9-208ENST00000555961 C9orf170A2RU37 121 aa0.32□□□□□ -2.36
NEK9-208ENST00000555961 ZNF727A8MUV8 499 aa0.32□□□□□ -2.36
NEK9-208ENST00000555961 IQCF6A8MYZ5 107 aa0.32□□□□□ -2.36
NEK9-208ENST00000555961 FABP2P12104 132 aa0.32□□□□□ -2.36
NEK9-208ENST00000555961 EVI2AP22794 236 aa0.32□□□□□ -2.36
NEK9-208ENST00000555961 KDELR1P24390 212 aa0.32□□□□□ -2.36
NEK9-208ENST00000555961 ETV6P41212 452 aa0.32□□□□□ -2.36
NEK9-208ENST00000555961 GNG10P50151 68 aa0.32□□□□□ -2.36
NEK9-208ENST00000555961 POLR2HP52434 150 aaKnown RBP0.32□□□□□ -2.36
NEK9-208ENST00000555961 EDDM3BP56851 147 aa0.32□□□□□ -2.36
NEK9-208ENST00000555961 RBM3P98179 157 aaKnown RBP0.32□□□□□ -2.36
NEK9-208ENST00000555961 UNQ5815/PRO19632Q6UWF5 114 aa0.32□□□□□ -2.36
NEK9-208ENST00000555961 C3orf62Q6ZUJ4 267 aa0.32□□□□□ -2.36
NEK9-208ENST00000555961 MMGT1Q8N4V1 131 aa0.32□□□□□ -2.36
NEK9-208ENST00000555961 OR5H6Q8NGV6 325 aa0.32□□□□□ -2.36
NEK9-208ENST00000555961 THEM6Q8WUY1 208 aa0.32□□□□□ -2.36
NEK9-208ENST00000555961 LEAP2Q969E1 77 aa0.32□□□□□ -2.36
NEK9-208ENST00000555961 HOPXQ9BPY8 73 aaPredicted RBP0.32□□□□□ -2.36
NEK9-208ENST00000555961 TRAV23DV6A0A075B6W5 121 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 TRAV13-1A0A0B4J241 112 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 A0A1W2PRE2 83 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 TMEM189A5PLL7 270 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 BBIP1A8MTZ0 92 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 OOSP1A8MZH6 123 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 H3BMG7 143 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 K7ERJ3 54 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 RBP4P02753 201 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 PRH1P02810 166 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 S100A11P31949 105 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 FXYD4P59646 89 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 DEFB131AP59861 70 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 RPS28P62857 69 aaKnown RBP0.31□□□□□ -2.36
NEK9-208ENST00000555961 KRTAP20-2Q3LI61 65 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 OCIAD2Q56VL3 154 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 XAF1Q6GPH4 301 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 SMIM15Q7Z3B0 74 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 LINC00305Q7Z4B0 112 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 COMMD6Q7Z4G1 85 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 KRTAP19-3Q7Z4W3 81 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 OR5A2Q8NGI9 324 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 MAGOHBQ96A72 148 aaKnown RBP0.31□□□□□ -2.36
NEK9-208ENST00000555961 DPH3Q96FX2 82 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 VPS25Q9BRG1 176 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 LPAR5Q9H1C0 372 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 MRPL35Q9NZE8 188 aaKnown RBP0.31□□□□□ -2.36
NEK9-208ENST00000555961 MED31Q9Y3C7 131 aa0.31□□□□□ -2.36
NEK9-208ENST00000555961 TRAV2A0A0B4J234 112 aa0.3□□□□□ -2.36
NEK9-208ENST00000555961 PHGR1C9JFL3 82 aa0.3□□□□□ -2.36
NEK9-208ENST00000555961 MCRIP1C9JLW8 97 aa0.3□□□□□ -2.36
NEK9-208ENST00000555961 GABARAPH6UMI1 98 aa0.3□□□□□ -2.36
NEK9-208ENST00000555961 PLGLAQ15195 96 aa0.3□□□□□ -2.36
NEK9-208ENST00000555961 TDRG1Q3Y452 100 aa0.3□□□□□ -2.36
NEK9-208ENST00000555961 Q5XG85 94 aa0.3□□□□□ -2.36
NEK9-208ENST00000555961 LYPD5Q6UWN5 251 aa0.3□□□□□ -2.36
NEK9-208ENST00000555961 RPS27LQ71UM5 84 aaKnown RBP0.3□□□□□ -2.36
NEK9-208ENST00000555961 PPP1R1CQ8WVI7 109 aa0.3□□□□□ -2.36
NEK9-208ENST00000555961 COA4Q9NYJ1 87 aa0.3□□□□□ -2.36
NEK9-208ENST00000555961 HSPB11Q9Y547 144 aa0.3□□□□□ -2.36
NEK9-208ENST00000555961 LINC00312Q9Y6C7 94 aa0.3□□□□□ -2.36
NEK9-208ENST00000555961 TRAV36DV7A0A075B6V5 113 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 C3orf85A0A1B0GTC6 90 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 GNG14A0A1W2PPG7 69 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 PRORSD1PA6NEY8 169 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 HIGD1CA8MV81 97 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 TSTD3H0UI37 97 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 H3BUA1 57 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 H7BYZ3 331 aa0.29□□□□□ -2.36
NEK9-208ENST00000555961 UQCRQO14949 82 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms