RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 TRBV7-7A0A0K0K1E9 115 aa11.94□□□□□ -0.5
PPP4R3A-208ENST00000555462 FAM240AA0A1B0GVK7 77 aa11.94□□□□□ -0.5
PPP4R3A-208ENST00000555462 CFAP161Q6P656 301 aa11.94□□□□□ -0.5
PPP4R3A-208ENST00000555462 CXCL5P42830 114 aa11.94□□□□□ -0.5
PPP4R3A-208ENST00000555462 DSCR9P59020 149 aa11.94□□□□□ -0.5
PPP4R3A-208ENST00000555462 HILS1P60008 231 aa11.94□□□□□ -0.5
PPP4R3A-208ENST00000555462 DEFB121Q5J5C9 76 aa11.94□□□□□ -0.5
PPP4R3A-208ENST00000555462 TRAV13-2A0A0B4J235 113 aa11.94□□□□□ -0.5
PPP4R3A-208ENST00000555462 TRACP01848 142 aa11.93□□□□□ -0.5
PPP4R3A-208ENST00000555462 J3QLI3 93 aa11.93□□□□□ -0.5
PPP4R3A-208ENST00000555462 GYPEP15421 78 aa11.93□□□□□ -0.5
PPP4R3A-208ENST00000555462 HTN3P15516 51 aa11.93□□□□□ -0.5
PPP4R3A-208ENST00000555462 A0A1B0GX51 115 aa11.92□□□□□ -0.5
PPP4R3A-208ENST00000555462 OTOGQ6ZRI0 2925 aa11.92□□□□□ -0.5
PPP4R3A-208ENST00000555462 PLAC8L1A1L4L8 177 aa11.92□□□□□ -0.5
PPP4R3A-208ENST00000555462 TRBV6-8A0A0A6YYG3 113 aa11.91□□□□□ -0.5
PPP4R3A-208ENST00000555462 IGHV3OR16-9A0A0B4J2B5 98 aa11.9□□□□□ -0.5
PPP4R3A-208ENST00000555462 LINC00482Q8N8I6 264 aa11.9□□□□□ -0.5
PPP4R3A-208ENST00000555462 RNF152Q8N8N0 203 aa11.9□□□□□ -0.5
PPP4R3A-208ENST00000555462 BAHCC1Q9P281 2608 aa11.9□□□□□ -0.5
PPP4R3A-208ENST00000555462 TRBV10-1A0A0K0K1A3 114 aa11.9□□□□□ -0.5
PPP4R3A-208ENST00000555462 LRRC75A-AS1Q8N1F1 130 aa11.9□□□□□ -0.5
PPP4R3A-208ENST00000555462 RPL28P46779 137 aaKnown RBP11.89□□□□□ -0.51
PPP4R3A-208ENST00000555462 LINC00269Q8N2A0 174 aa11.89□□□□□ -0.51
PPP4R3A-208ENST00000555462 C3orf22Q8N5N4 141 aa11.89□□□□□ -0.51
PPP4R3A-208ENST00000555462 FHL2Q14192 279 aa11.88□□□□□ -0.51
PPP4R3A-208ENST00000555462 DEFB113Q30KQ7 82 aa11.88□□□□□ -0.51
PPP4R3A-208ENST00000555462 INAFM2P0DMQ5 153 aa11.88□□□□□ -0.51
PPP4R3A-208ENST00000555462 COPS9Q8WXC6 57 aa11.88□□□□□ -0.51
PPP4R3A-208ENST00000555462 LINC00959A0A1B0GUT2 108 aa11.88□□□□□ -0.51
PPP4R3A-208ENST00000555462 KIR2DL5BQ8NHK3 375 aa11.88□□□□□ -0.51
PPP4R3A-208ENST00000555462 TRAV23DV6A0A075B6W5 121 aa11.87□□□□□ -0.51
PPP4R3A-208ENST00000555462 FSHBP01225 129 aa11.87□□□□□ -0.51
PPP4R3A-208ENST00000555462 ACYP1P07311 99 aa11.86□□□□□ -0.51
PPP4R3A-208ENST00000555462 NOTCH1P46531 2555 aa11.86□□□□□ -0.51
PPP4R3A-208ENST00000555462 LINC01600Q96MT4 127 aa11.86□□□□□ -0.51
PPP4R3A-208ENST00000555462 SMR3AQ99954 134 aa11.86□□□□□ -0.51
PPP4R3A-208ENST00000555462 SPATA3Q8NHX4 192 aa11.85□□□□□ -0.51
PPP4R3A-208ENST00000555462 CSDC2Q9Y534 153 aaKnown RBP11.85□□□□□ -0.51
PPP4R3A-208ENST00000555462 C6orf223Q8N319 242 aa11.85□□□□□ -0.51
PPP4R3A-208ENST00000555462 FAM19A1Q7Z5A9 133 aa11.84□□□□□ -0.51
PPP4R3A-208ENST00000555462 LINC01006Q8NI28 216 aa11.84□□□□□ -0.51
PPP4R3A-208ENST00000555462 IL17DQ8TAD2 202 aa11.84□□□□□ -0.51
PPP4R3A-208ENST00000555462 ANGP03950 147 aaKnown RBP11.84□□□□□ -0.51
PPP4R3A-208ENST00000555462 C16orf74Q96GX8 76 aa11.83□□□□□ -0.52
PPP4R3A-208ENST00000555462 FAM110AQ9BQ89 295 aa11.83□□□□□ -0.52
PPP4R3A-208ENST00000555462 DSCR8Q96T75 97 aa11.83□□□□□ -0.52
PPP4R3A-208ENST00000555462 NBEAL1Q6ZS30 2694 aa11.82□□□□□ -0.52
PPP4R3A-208ENST00000555462 FBN1P35555 2871 aaKnown RBP11.82□□□□□ -0.52
PPP4R3A-208ENST00000555462 Q8NDZ9 215 aa11.82□□□□□ -0.52
PPP4R3A-208ENST00000555462 UQCRQO14949 82 aa11.81□□□□□ -0.52
PPP4R3A-208ENST00000555462 MAST4O15021 2626 aa11.81□□□□□ -0.52
PPP4R3A-208ENST00000555462 A0A087WZ39 114 aa11.81□□□□□ -0.52
PPP4R3A-208ENST00000555462 C6orf99Q4VX62 202 aa11.81□□□□□ -0.52
PPP4R3A-208ENST00000555462 ENHOQ6UWT2 76 aa11.81□□□□□ -0.52
PPP4R3A-208ENST00000555462 TRBV6-4A0A1B0GX49 114 aa11.8□□□□□ -0.52
PPP4R3A-208ENST00000555462 LINC01561Q8N1V8 128 aa11.8□□□□□ -0.52
PPP4R3A-208ENST00000555462 DEFB135Q30KP9 77 aa11.8□□□□□ -0.52
PPP4R3A-208ENST00000555462 ORMDL1Q9P0S3 153 aa11.8□□□□□ -0.52
PPP4R3A-208ENST00000555462 COX7CP15954 63 aa11.79□□□□□ -0.52
PPP4R3A-208ENST00000555462 FLNBO75369 2602 aaKnown RBP11.79□□□□□ -0.52
PPP4R3A-208ENST00000555462 M0R2N4 97 aa11.79□□□□□ -0.52
PPP4R3A-208ENST00000555462 TMEM86BQ8N661 226 aa11.79□□□□□ -0.52
PPP4R3A-208ENST00000555462 IBA57-AS1B1ANH7 110 aa11.78□□□□□ -0.52
PPP4R3A-208ENST00000555462 SS18Q15532 418 aa11.78□□□□□ -0.52
PPP4R3A-208ENST00000555462 C10orf25Q5T742 122 aa11.78□□□□□ -0.52
PPP4R3A-208ENST00000555462 SCXQ7RTU7 201 aa11.78□□□□□ -0.52
PPP4R3A-208ENST00000555462 TMEM126AQ9H061 195 aa11.78□□□□□ -0.52
PPP4R3A-208ENST00000555462 XAGE1AQ9HD64 81 aa11.78□□□□□ -0.52
PPP4R3A-208ENST00000555462 USP17L23D6RBM5 183 aa11.77□□□□□ -0.52
PPP4R3A-208ENST00000555462 S100A7L2Q5SY68 101 aa11.77□□□□□ -0.53
PPP4R3A-208ENST00000555462 FAM222AQ5U5X8 452 aa11.77□□□□□ -0.53
PPP4R3A-208ENST00000555462 CSNK1G2-AS1Q8NCQ2 148 aa11.77□□□□□ -0.53
PPP4R3A-208ENST00000555462 C2orf48Q96LS8 159 aa11.77□□□□□ -0.53
PPP4R3A-208ENST00000555462 IMUPQ9GZP8 106 aa11.77□□□□□ -0.53
PPP4R3A-208ENST00000555462 C19orf73Q9NVV2 129 aa11.77□□□□□ -0.53
PPP4R3A-208ENST00000555462 H0YGX0 51 aa11.76□□□□□ -0.53
PPP4R3A-208ENST00000555462 UNQ6190/PRO20217Q6UXQ8 127 aa11.75□□□□□ -0.53
PPP4R3A-208ENST00000555462 LAMTOR3Q9UHA4 124 aa11.75□□□□□ -0.53
PPP4R3A-208ENST00000555462 RPL18AQ02543 176 aaKnown RBP11.75□□□□□ -0.53
PPP4R3A-208ENST00000555462 PF4P02776 101 aa11.75□□□□□ -0.53
PPP4R3A-208ENST00000555462 HAMPP81172 84 aa11.75□□□□□ -0.53
PPP4R3A-208ENST00000555462 CHCHD10Q8WYQ3 142 aaPredicted RBP11.74□□□□□ -0.53
PPP4R3A-208ENST00000555462 STAB1Q9NY15 2570 aa11.74□□□□□ -0.53
PPP4R3A-208ENST00000555462 NANOS2P60321 138 aaKnown RBP11.74□□□□□ -0.53
PPP4R3A-208ENST00000555462 FAM19A3Q7Z5A8 133 aa11.73□□□□□ -0.53
PPP4R3A-208ENST00000555462 KRTAP1-3Q8IUG1 177 aa11.73□□□□□ -0.53
PPP4R3A-208ENST00000555462 FAM19A5Q7Z5A7 132 aaPredicted RBP11.73□□□□□ -0.53
PPP4R3A-208ENST00000555462 COL6A5A8TX70 2615 aa11.73□□□□□ -0.53
PPP4R3A-208ENST00000555462 TRAV25A0A0B4J276 109 aa11.73□□□□□ -0.53
PPP4R3A-208ENST00000555462 TENM3Q9P273 2699 aa11.72□□□□□ -0.53
PPP4R3A-208ENST00000555462 IGLV1-51P01701 117 aa11.72□□□□□ -0.53
PPP4R3A-208ENST00000555462 ANK3Q12955 4377 aaKnown RBP11.72□□□□□ -0.53
PPP4R3A-208ENST00000555462 ATOX1O00244 68 aa11.71□□□□□ -0.53
PPP4R3A-208ENST00000555462 Q8N814 137 aa11.71□□□□□ -0.53
PPP4R3A-208ENST00000555462 GHRHP01286 108 aa11.71□□□□□ -0.54
PPP4R3A-208ENST00000555462 ZNF843Q8N446 348 aa11.71□□□□□ -0.54
PPP4R3A-208ENST00000555462 C20orf197Q8N268 126 aa11.7□□□□□ -0.54
PPP4R3A-208ENST00000555462 KLK12Q9UKR0 248 aa11.7□□□□□ -0.54
PPP4R3A-208ENST00000555462 REG3AQ06141 175 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms