RNA–Protein interactions for RNA: ENST00000555164.2

KTN1-219, Transcript of kinectin 1, humanhuman

TSL 4

Gene KTN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-219ENST00000555164 FDCSPQ8NFU4 85 aa0.18□□□□□ -2.38
KTN1-219ENST00000555164 CLTCQ00610 1675 aaKnown RBP0.18□□□□□ -2.38
KTN1-219ENST00000555164 NRXN1Q9ULB1 1477 aa0.17□□□□□ -2.38
KTN1-219ENST00000555164 ANKRD36A6QL64 1941 aa0.17□□□□□ -2.38
KTN1-219ENST00000555164 FXYD6-FXYD2A0A087WZ82 144 aa0.17□□□□□ -2.38
KTN1-219ENST00000555164 ANKRD17O75179 2603 aaKnown RBP0.17□□□□□ -2.38
KTN1-219ENST00000555164 SPRR1AP35321 89 aa0.17□□□□□ -2.38
KTN1-219ENST00000555164 TENM4Q6N022 2769 aa0.17□□□□□ -2.38
KTN1-219ENST00000555164 SNHG12Q9BXW3 62 aa0.17□□□□□ -2.38
KTN1-219ENST00000555164 PKD1L1Q8TDX9 2849 aa0.17□□□□□ -2.38
KTN1-219ENST00000555164 CCNB3Q8WWL7 1395 aa0.17□□□□□ -2.38
KTN1-219ENST00000555164 NCOR2Q9Y618 2525 aa0.17□□□□□ -2.38
KTN1-219ENST00000555164 SPTBN2O15020 2390 aa0.17□□□□□ -2.38
KTN1-219ENST00000555164 HUWE1Q7Z6Z7 4374 aaKnown RBP0.17□□□□□ -2.38
KTN1-219ENST00000555164 IGSF10Q6WRI0 2623 aa0.17□□□□□ -2.38
KTN1-219ENST00000555164 PMCHL1Q16048 86 aa0.16□□□□□ -2.38
KTN1-219ENST00000555164 DEFB109BQ30KR1 87 aa0.16□□□□□ -2.38
KTN1-219ENST00000555164 MACF1Q9UPN3 7388 aaKnown RBP0.15□□□□□ -2.39
KTN1-219ENST00000555164 PKIAP61925 76 aa0.15□□□□□ -2.39
KTN1-219ENST00000555164 PSMG4Q5JS54 123 aa0.15□□□□□ -2.39
KTN1-219ENST00000555164 VAMP8Q9BV40 100 aa0.15□□□□□ -2.39
KTN1-219ENST00000555164 KIAA0556O60303 1618 aa0.15□□□□□ -2.39
KTN1-219ENST00000555164 MON2Q7Z3U7 1717 aa0.15□□□□□ -2.39
KTN1-219ENST00000555164 RAPGEF2Q9Y4G8 1499 aa0.15□□□□□ -2.39
KTN1-219ENST00000555164 KMT2AQ03164 3969 aa0.14□□□□□ -2.39
KTN1-219ENST00000555164 MYCBP2O75592 4640 aa0.14□□□□□ -2.39
KTN1-219ENST00000555164 TRBV7-7A0A0K0K1E9 115 aa0.14□□□□□ -2.39
KTN1-219ENST00000555164 SYS1-DBNDD2H3BUS1 97 aa0.14□□□□□ -2.39
KTN1-219ENST00000555164 UQCRHP07919 91 aa0.14□□□□□ -2.39
KTN1-219ENST00000555164 COX6B1P14854 86 aa0.14□□□□□ -2.39
KTN1-219ENST00000555164 COL5A1-AS1Q5SY13 56 aa0.14□□□□□ -2.39
KTN1-219ENST00000555164 MYH4Q9Y623 1939 aa0.14□□□□□ -2.39
KTN1-219ENST00000555164 COL7A1Q02388 2944 aa0.13□□□□□ -2.39
KTN1-219ENST00000555164 SETBP1Q9Y6X0 1596 aa0.13□□□□□ -2.39
KTN1-219ENST00000555164 FMN2Q9NZ56 1722 aa0.13□□□□□ -2.39
KTN1-219ENST00000555164 FAT2Q9NYQ8 4349 aa0.12□□□□□ -2.39
KTN1-219ENST00000555164 C5P01031 1676 aa0.12□□□□□ -2.39
KTN1-219ENST00000555164 K7EQZ3 153 aa0.12□□□□□ -2.39
KTN1-219ENST00000555164 SPRR1BP22528 89 aa0.12□□□□□ -2.39
KTN1-219ENST00000555164 UBR5O95071 2799 aaPredicted RBP0.11□□□□□ -2.39
KTN1-219ENST00000555164 CHD6Q8TD26 2715 aa0.11□□□□□ -2.39
KTN1-219ENST00000555164 UBR1Q8IWV7 1749 aa0.11□□□□□ -2.39
KTN1-219ENST00000555164 ARMS2P0C7Q2 107 aa0.11□□□□□ -2.39
KTN1-219ENST00000555164 FAUP35544 74 aaKnown RBP0.11□□□□□ -2.39
KTN1-219ENST00000555164 DEFB107AQ8IZN7 70 aa0.11□□□□□ -2.39
KTN1-219ENST00000555164 ABCC2Q92887 1545 aa0.11□□□□□ -2.39
KTN1-219ENST00000555164 TROQ12816 1431 aaPredicted RBP0.11□□□□□ -2.39
KTN1-219ENST00000555164 KIAA1551Q9HCM1 1747 aa0.1□□□□□ -2.39
KTN1-219ENST00000555164 CRYBG1Q9Y4K1 1723 aa0.1□□□□□ -2.39
KTN1-219ENST00000555164 RGPD4Q7Z3J3 1758 aa0.1□□□□□ -2.39
KTN1-219ENST00000555164 H0Y9P7 68 aa0.1□□□□□ -2.39
KTN1-219ENST00000555164 H3BQF6 201 aa0.1□□□□□ -2.39
KTN1-219ENST00000555164 HIVEP3Q5T1R4 2406 aa0.1□□□□□ -2.39
KTN1-219ENST00000555164 PTPRQQ9UMZ3 2332 aa0.1□□□□□ -2.39
KTN1-219ENST00000555164 SLIT1O75093 1534 aa0.09□□□□□ -2.39
KTN1-219ENST00000555164 EPRSP07814 1512 aaKnown RBP0.09□□□□□ -2.39
KTN1-219ENST00000555164 A0A1B0GU69 56 aa0.09□□□□□ -2.4
KTN1-219ENST00000555164 C6orf201Q7Z4U5 140 aa0.09□□□□□ -2.4
KTN1-219ENST00000555164 FANCAO15360 1455 aa0.09□□□□□ -2.4
KTN1-219ENST00000555164 DOPEY2Q9Y3R5 2298 aa0.08□□□□□ -2.4
KTN1-219ENST00000555164 EDC4Q6P2E9 1401 aaKnown RBP0.08□□□□□ -2.4
KTN1-219ENST00000555164 HMCN2Q8NDA2 5059 aa0.08□□□□□ -2.4
KTN1-219ENST00000555164 DNAJC13O75165 2243 aa0.07□□□□□ -2.4
KTN1-219ENST00000555164 GOLGA4Q13439 2230 aaKnown RBP0.07□□□□□ -2.4
KTN1-219ENST00000555164 PRKDCP78527 4128 aaKnown RBP0.07□□□□□ -2.4
KTN1-219ENST00000555164 TTC37Q6PGP7 1564 aa0.07□□□□□ -2.4
KTN1-219ENST00000555164 WNK2Q9Y3S1 2297 aa0.07□□□□□ -2.4
KTN1-219ENST00000555164 RGPD3A6NKT7 1758 aaPredicted RBP0.07□□□□□ -2.4
KTN1-219ENST00000555164 UQCRHLA0A096LP55 91 aa0.07□□□□□ -2.4
KTN1-219ENST00000555164 PSENENQ9NZ42 101 aa0.07□□□□□ -2.4
KTN1-219ENST00000555164 LRRC37AA6NMS7 1700 aa0.07□□□□□ -2.4
KTN1-219ENST00000555164 TNXBP22105 4242 aa0.07□□□□□ -2.4
KTN1-219ENST00000555164 NCOR1O75376 2440 aa0.06□□□□□ -2.4
KTN1-219ENST00000555164 PKDREJQ9NTG1 2253 aa0.06□□□□□ -2.4
KTN1-219ENST00000555164 CACNA1AO00555 2505 aa0.06□□□□□ -2.4
KTN1-219ENST00000555164 F8WEM9 126 aa0.06□□□□□ -2.4
KTN1-219ENST00000555164 HIGD1BQ9P298 99 aa0.06□□□□□ -2.4
KTN1-219ENST00000555164 BSNQ9UPA5 3926 aa0.06□□□□□ -2.4
KTN1-219ENST00000555164 FLNAP21333 2647 aaKnown RBP0.06□□□□□ -2.4
KTN1-219ENST00000555164 DMBT1Q9UGM3 2413 aaPredicted RBP0.06□□□□□ -2.4
KTN1-219ENST00000555164 MYO3AQ8NEV4 1616 aa0.05□□□□□ -2.4
KTN1-219ENST00000555164 AKAP6Q13023 2319 aa0.05□□□□□ -2.4
KTN1-219ENST00000555164 ATP10BO94823 1461 aa0.05□□□□□ -2.4
KTN1-219ENST00000555164 FLNCQ14315 2725 aa0.05□□□□□ -2.4
KTN1-219ENST00000555164 CUX1P39880 1505 aa0.05□□□□□ -2.4
KTN1-219ENST00000555164 ETDBQ3ZM63 59 aa0.05□□□□□ -2.4
KTN1-219ENST00000555164 USMG5Q96IX5 58 aa0.05□□□□□ -2.4
KTN1-219ENST00000555164 C20orf78Q9BR46 151 aa0.05□□□□□ -2.4
KTN1-219ENST00000555164 ZANQ9Y493 2812 aa0.05□□□□□ -2.4
KTN1-219ENST00000555164 KIF20BQ96Q89 1820 aa0.05□□□□□ -2.4
KTN1-219ENST00000555164 DCHS2Q6V1P9 2916 aa0.05□□□□□ -2.4
KTN1-219ENST00000555164 LPAP08519 4548 aa0.05□□□□□ -2.4
KTN1-219ENST00000555164 ABCA2Q9BZC7 2435 aa0.05□□□□□ -2.4
KTN1-219ENST00000555164 IQSEC2Q5JU85 1478 aa0.04□□□□□ -2.4
KTN1-219ENST00000555164 NSD1Q96L73 2696 aaPredicted RBP0.04□□□□□ -2.4
KTN1-219ENST00000555164 PTPN13Q12923 2485 aa0.04□□□□□ -2.4
KTN1-219ENST00000555164 SAMD9Q5K651 1589 aa0.04□□□□□ -2.4
KTN1-219ENST00000555164 PRM1P04553 51 aa0.04□□□□□ -2.4
KTN1-219ENST00000555164 GNGT1P63211 74 aa0.04□□□□□ -2.4
KTN1-219ENST00000555164 HMGN3Q15651 99 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms