RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 CFC1BP0CG36 223 aa7.72□□□□□ -1.17
SHMT2-216ENST00000554975 CFC1P0CG37 223 aa7.72□□□□□ -1.17
SHMT2-216ENST00000554975 Q1RN00 199 aa7.72□□□□□ -1.17
SHMT2-216ENST00000554975 RNASE13Q5GAN3 156 aaKnown RBP7.72□□□□□ -1.17
SHMT2-216ENST00000554975 CDKN2A-AS1Q9UH64 79 aa7.72□□□□□ -1.17
SHMT2-216ENST00000554975 H3BMG7 143 aa7.71□□□□□ -1.18
SHMT2-216ENST00000554975 M0QXV9 152 aa7.71□□□□□ -1.18
SHMT2-216ENST00000554975 COX6CP09669 75 aa7.71□□□□□ -1.18
SHMT2-216ENST00000554975 LINC00242Q5T6M2 205 aa7.71□□□□□ -1.18
SHMT2-216ENST00000554975 MUSTN1Q8IVN3 82 aa7.71□□□□□ -1.18
SHMT2-216ENST00000554975 CDC42SE2Q9NRR3 84 aa7.71□□□□□ -1.18
SHMT2-216ENST00000554975 TRBV6-8A0A0A6YYG3 113 aa7.7□□□□□ -1.18
SHMT2-216ENST00000554975 TEX48A0A1B0GUV7 120 aa7.7□□□□□ -1.18
SHMT2-216ENST00000554975 SMIM1B2RUZ4 78 aa7.7□□□□□ -1.18
SHMT2-216ENST00000554975 CDK2AP2O75956 126 aa7.7□□□□□ -1.18
SHMT2-216ENST00000554975 IGHV3-33P01772 117 aa7.7□□□□□ -1.18
SHMT2-216ENST00000554975 SCGB1C2P0DMR2 95 aa7.7□□□□□ -1.18
SHMT2-216ENST00000554975 PSMB2P49721 201 aa7.7□□□□□ -1.18
SHMT2-216ENST00000554975 NTM-AS1Q6ZSK4 140 aa7.7□□□□□ -1.18
SHMT2-216ENST00000554975 Q6ZTC4 211 aa7.7□□□□□ -1.18
SHMT2-216ENST00000554975 Q8N1X5 172 aa7.7□□□□□ -1.18
SHMT2-216ENST00000554975 LITAFQ99732 161 aa7.7□□□□□ -1.18
SHMT2-216ENST00000554975 Q9UF83 564 aa7.7□□□□□ -1.18
SHMT2-216ENST00000554975 TRBV30A0A0K0K1B3 111 aa7.69□□□□□ -1.18
SHMT2-216ENST00000554975 FHL2Q14192 279 aa7.69□□□□□ -1.18
SHMT2-216ENST00000554975 CELA1Q9UNI1 258 aa7.69□□□□□ -1.18
SHMT2-216ENST00000554975 TRAV13-1A0A0B4J241 112 aa7.68□□□□□ -1.18
SHMT2-216ENST00000554975 ATXN8Q156A1 80 aa7.68□□□□□ -1.18
SHMT2-216ENST00000554975 Q6ZR54 194 aa7.68□□□□□ -1.18
SHMT2-216ENST00000554975 Q9H8V8 135 aa7.68□□□□□ -1.18
SHMT2-216ENST00000554975 PRO0461Q9UI25 63 aa7.68□□□□□ -1.18
SHMT2-216ENST00000554975 PRO0255Q9UI72 69 aa7.68□□□□□ -1.18
SHMT2-216ENST00000554975 TRAV10A0A0B4J240 114 aa7.67□□□□□ -1.18
SHMT2-216ENST00000554975 C16orf90A8MZG2 172 aa7.67□□□□□ -1.18
SHMT2-216ENST00000554975 PRSS2P07478 247 aa7.67□□□□□ -1.18
SHMT2-216ENST00000554975 SPART-AS1P0CW21 52 aa7.67□□□□□ -1.18
SHMT2-216ENST00000554975 MEIG1Q5JSS6 88 aa7.67□□□□□ -1.18
SHMT2-216ENST00000554975 CHCHD5Q9BSY4 110 aa7.67□□□□□ -1.18
SHMT2-216ENST00000554975 FAM222AQ5U5X8 452 aa7.66□□□□□ -1.18
SHMT2-216ENST00000554975 SH2D6Q7Z4S9 175 aa7.66□□□□□ -1.18
SHMT2-216ENST00000554975 TEN1Q86WV5 123 aa7.66□□□□□ -1.18
SHMT2-216ENST00000554975 LINC01561Q8N1V8 128 aa7.66□□□□□ -1.18
SHMT2-216ENST00000554975 PPDPFLQ8WWR9 84 aa7.66□□□□□ -1.18
SHMT2-216ENST00000554975 TRAV26-1A0A087WT03 109 aa7.65□□□□□ -1.18
SHMT2-216ENST00000554975 DEFB131BA0A096LNP1 70 aa7.65□□□□□ -1.18
SHMT2-216ENST00000554975 F5H768 121 aa7.65□□□□□ -1.18
SHMT2-216ENST00000554975 TCL1BO95988 128 aa7.65□□□□□ -1.18
SHMT2-216ENST00000554975 GYPEP15421 78 aa7.65□□□□□ -1.18
SHMT2-216ENST00000554975 TNP2Q05952 138 aa7.65□□□□□ -1.18
SHMT2-216ENST00000554975 WFDC2Q14508 124 aa7.65□□□□□ -1.18
SHMT2-216ENST00000554975 FLG2Q5D862 2391 aaPredicted RBP7.65□□□□□ -1.18
SHMT2-216ENST00000554975 ICOSQ9Y6W8 199 aa7.65□□□□□ -1.18
SHMT2-216ENST00000554975 MYCBP2O75592 4640 aa7.65□□□□□ -1.19
SHMT2-216ENST00000554975 A0A1B0GUV1 79 aa7.64□□□□□ -1.19
SHMT2-216ENST00000554975 DEFB130BP0DP73 79 aa7.64□□□□□ -1.19
SHMT2-216ENST00000554975 DEFB130AP0DP74 79 aa7.64□□□□□ -1.19
SHMT2-216ENST00000554975 HTN3P15516 51 aa7.64□□□□□ -1.19
SHMT2-216ENST00000554975 GAGE6Q13070 117 aa7.64□□□□□ -1.19
SHMT2-216ENST00000554975 ETDBQ3ZM63 59 aa7.64□□□□□ -1.19
SHMT2-216ENST00000554975 COX7B2Q8TF08 81 aa7.64□□□□□ -1.19
SHMT2-216ENST00000554975 ZNF625Q96I27 306 aaPredicted RBP7.64□□□□□ -1.19
SHMT2-216ENST00000554975 LOC100131303A0A0U1RQF7 123 aa7.63□□□□□ -1.19
SHMT2-216ENST00000554975 H3BT86 120 aa7.63□□□□□ -1.19
SHMT2-216ENST00000554975 RPL13AP40429 203 aaKnown RBP7.63□□□□□ -1.19
SHMT2-216ENST00000554975 DAD1P61803 113 aa7.63□□□□□ -1.19
SHMT2-216ENST00000554975 COX6A2Q02221 97 aa7.63□□□□□ -1.19
SHMT2-216ENST00000554975 SS18Q15532 418 aa7.63□□□□□ -1.19
SHMT2-216ENST00000554975 LINC00308Q8TCZ7 52 aa7.63□□□□□ -1.19
SHMT2-216ENST00000554975 LINC01600Q96MT4 127 aa7.63□□□□□ -1.19
SHMT2-216ENST00000554975 PAX4O43316 350 aa7.62□□□□□ -1.19
SHMT2-216ENST00000554975 SLC25A20O43772 301 aa7.62□□□□□ -1.19
SHMT2-216ENST00000554975 ATP5G1P05496 136 aa7.62□□□□□ -1.19
SHMT2-216ENST00000554975 PCP4P48539 62 aa7.62□□□□□ -1.19
SHMT2-216ENST00000554975 LINC01620Q4KN68 170 aa7.62□□□□□ -1.19
SHMT2-216ENST00000554975 FAT1Q14517 4588 aa7.61□□□□□ -1.19
SHMT2-216ENST00000554975 A0A087WZ39 114 aa7.61□□□□□ -1.19
SHMT2-216ENST00000554975 H7C2G1 150 aa7.61□□□□□ -1.19
SHMT2-216ENST00000554975 CXCL5P42830 114 aa7.61□□□□□ -1.19
SHMT2-216ENST00000554975 ADAMTSL4-AS1Q5T5F5 129 aa7.61□□□□□ -1.19
SHMT2-216ENST00000554975 TRAV13-2A0A0B4J235 113 aa7.6□□□□□ -1.19
SHMT2-216ENST00000554975 IGHV3OR16-9A0A0B4J2B5 98 aa7.6□□□□□ -1.19
SHMT2-216ENST00000554975 IBA57-AS1B1ANH7 110 aa7.6□□□□□ -1.19
SHMT2-216ENST00000554975 C9JAW5 83 aa7.6□□□□□ -1.19
SHMT2-216ENST00000554975 TMEM262E9PQX1 116 aa7.6□□□□□ -1.19
SHMT2-216ENST00000554975 TRIAP1O43715 76 aa7.6□□□□□ -1.19
SHMT2-216ENST00000554975 SCGB1A1P11684 91 aa7.6□□□□□ -1.19
SHMT2-216ENST00000554975 FOXI1Q12951 378 aa7.6□□□□□ -1.19
SHMT2-216ENST00000554975 C1orf134Q5TEV5 83 aa7.6□□□□□ -1.19
SHMT2-216ENST00000554975 UBR4Q5T4S7 5183 aa7.59□□□□□ -1.19
SHMT2-216ENST00000554975 TRBV10-2A0A0K0K1G8 114 aa7.59□□□□□ -1.19
SHMT2-216ENST00000554975 EIF4EBP3O60516 100 aaPredicted RBP7.59□□□□□ -1.19
SHMT2-216ENST00000554975 CRPP02741 224 aa7.59□□□□□ -1.19
SHMT2-216ENST00000554975 UBE2DNLQ8IWF7 75 aa7.59□□□□□ -1.19
SHMT2-216ENST00000554975 CARD19Q96LW7 228 aa7.59□□□□□ -1.19
SHMT2-216ENST00000554975 SRRM2Q9UQ35 2752 aaKnown RBP7.58□□□□□ -1.2
SHMT2-216ENST00000554975 IGLV4-60A0A075B6I1 120 aa7.58□□□□□ -1.2
SHMT2-216ENST00000554975 LINC00959A0A1B0GUT2 108 aa7.58□□□□□ -1.2
SHMT2-216ENST00000554975 LST1O00453 97 aa7.58□□□□□ -1.2
SHMT2-216ENST00000554975 SMCPP49901 116 aaPredicted RBP7.58□□□□□ -1.2
SHMT2-216ENST00000554975 MRPL23Q16540 153 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms