RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 KMT2AQ03164 3969 aa12.07□□□□□ -0.48
SHOX-204ENST00000554971 TRGV4A0A0C4DH28 118 aa12.06□□□□□ -0.48
SHOX-204ENST00000554971 MTURNQ8N3F0 131 aa12.06□□□□□ -0.48
SHOX-204ENST00000554971 SMIM1B2RUZ4 78 aa12.05□□□□□ -0.48
SHOX-204ENST00000554971 DAD1P61803 113 aa12.05□□□□□ -0.48
SHOX-204ENST00000554971 TRAV13-1A0A0B4J241 112 aa12.03□□□□□ -0.48
SHOX-204ENST00000554971 F5H768 121 aa12.03□□□□□ -0.48
SHOX-204ENST00000554971 SLC25A20O43772 301 aa12.03□□□□□ -0.48
SHOX-204ENST00000554971 FHL2Q14192 279 aa12.03□□□□□ -0.48
SHOX-204ENST00000554971 Q9H8V8 135 aa12.03□□□□□ -0.48
SHOX-204ENST00000554971 CASC10Q5T4H9 136 aa12.03□□□□□ -0.48
SHOX-204ENST00000554971 ICOSQ9Y6W8 199 aa12.03□□□□□ -0.48
SHOX-204ENST00000554971 ZNF625Q96I27 306 aaPredicted RBP12.02□□□□□ -0.49
SHOX-204ENST00000554971 ALMS1Q8TCU4 4167 aa12.02□□□□□ -0.49
SHOX-204ENST00000554971 H7C2G1 150 aa12.01□□□□□ -0.49
SHOX-204ENST00000554971 TRIAP1O43715 76 aa12.01□□□□□ -0.49
SHOX-204ENST00000554971 TRBV6-8A0A0A6YYG3 113 aa12.01□□□□□ -0.49
SHOX-204ENST00000554971 C9JAW5 83 aa12.01□□□□□ -0.49
SHOX-204ENST00000554971 LINC01620Q4KN68 170 aa12.01□□□□□ -0.49
SHOX-204ENST00000554971 LINC00308Q8TCZ7 52 aa12.01□□□□□ -0.49
SHOX-204ENST00000554971 DEFB131BA0A096LNP1 70 aa12□□□□□ -0.49
SHOX-204ENST00000554971 ANKRD29Q8N6D5 301 aa12□□□□□ -0.49
SHOX-204ENST00000554971 TRAV10A0A0B4J240 114 aa11.99□□□□□ -0.49
SHOX-204ENST00000554971 C3orf84H3BNL1 204 aa11.99□□□□□ -0.49
SHOX-204ENST00000554971 HYDINQ4G0P3 5121 aa11.99□□□□□ -0.49
SHOX-204ENST00000554971 TRBV10-2A0A0K0K1G8 114 aa11.99□□□□□ -0.49
SHOX-204ENST00000554971 TMEM262E9PQX1 116 aa11.99□□□□□ -0.49
SHOX-204ENST00000554971 HTN3P15516 51 aa11.99□□□□□ -0.49
SHOX-204ENST00000554971 CARD19Q96LW7 228 aa11.99□□□□□ -0.49
SHOX-204ENST00000554971 ATP5G1P05496 136 aa11.98□□□□□ -0.49
SHOX-204ENST00000554971 NUPR2A6NF83 97 aa11.97□□□□□ -0.49
SHOX-204ENST00000554971 LOC100131303A0A0U1RQF7 123 aa11.96□□□□□ -0.49
SHOX-204ENST00000554971 H3BT86 120 aa11.96□□□□□ -0.49
SHOX-204ENST00000554971 RPL13AP40429 203 aaKnown RBP11.96□□□□□ -0.5
SHOX-204ENST00000554971 MEIG1Q5JSS6 88 aa11.95□□□□□ -0.5
SHOX-204ENST00000554971 LST1O00453 97 aa11.94□□□□□ -0.5
SHOX-204ENST00000554971 CHCHD5Q9BSY4 110 aa11.94□□□□□ -0.5
SHOX-204ENST00000554971 GAGE6Q13070 117 aa11.94□□□□□ -0.5
SHOX-204ENST00000554971 COX7B2Q8TF08 81 aa11.94□□□□□ -0.5
SHOX-204ENST00000554971 RYR3Q15413 4870 aa11.93□□□□□ -0.5
SHOX-204ENST00000554971 A0A1B0GUV1 79 aa11.93□□□□□ -0.5
SHOX-204ENST00000554971 NPC2P61916 151 aa11.93□□□□□ -0.5
SHOX-204ENST00000554971 CDIP1Q9H305 208 aa11.93□□□□□ -0.5
SHOX-204ENST00000554971 IGHV3OR16-9A0A0B4J2B5 98 aa11.92□□□□□ -0.5
SHOX-204ENST00000554971 DAND5Q8N907 189 aa11.92□□□□□ -0.5
SHOX-204ENST00000554971 PRO0255Q9UI72 69 aa11.92□□□□□ -0.5
SHOX-204ENST00000554971 DNAH6Q9C0G6 4158 aa11.92□□□□□ -0.5
SHOX-204ENST00000554971 TRAV26-1A0A087WT03 109 aa11.92□□□□□ -0.5
SHOX-204ENST00000554971 A0A087WZ39 114 aa11.92□□□□□ -0.5
SHOX-204ENST00000554971 RYR2Q92736 4967 aa11.91□□□□□ -0.5
SHOX-204ENST00000554971 LINC01561Q8N1V8 128 aa11.91□□□□□ -0.5
SHOX-204ENST00000554971 APLNQ9ULZ1 77 aa11.91□□□□□ -0.5
SHOX-204ENST00000554971 KLK5Q9Y337 293 aaPredicted RBP11.91□□□□□ -0.5
SHOX-204ENST00000554971 IGLV4-60A0A075B6I1 120 aa11.9□□□□□ -0.51
SHOX-204ENST00000554971 C2orf82Q6UX34 121 aa11.9□□□□□ -0.51
SHOX-204ENST00000554971 TRAV13-2A0A0B4J235 113 aa11.89□□□□□ -0.51
SHOX-204ENST00000554971 COX7A2LO14548 114 aa11.89□□□□□ -0.51
SHOX-204ENST00000554971 SOSTDC1Q6X4U4 206 aa11.89□□□□□ -0.51
SHOX-204ENST00000554971 DNAH2Q9P225 4427 aa11.89□□□□□ -0.51
SHOX-204ENST00000554971 GYPEP15421 78 aa11.88□□□□□ -0.51
SHOX-204ENST00000554971 NTN5Q8WTR8 489 aaPredicted RBP11.88□□□□□ -0.51
SHOX-204ENST00000554971 IBA57-AS1B1ANH7 110 aa11.88□□□□□ -0.51
SHOX-204ENST00000554971 LINC00959A0A1B0GUT2 108 aa11.87□□□□□ -0.51
SHOX-204ENST00000554971 SS18Q15532 418 aa11.86□□□□□ -0.51
SHOX-204ENST00000554971 UBE2WQ96B02 151 aa11.86□□□□□ -0.51
SHOX-204ENST00000554971 H3BNG1 76 aa11.84□□□□□ -0.51
SHOX-204ENST00000554971 PAX4O43316 350 aa11.84□□□□□ -0.51
SHOX-204ENST00000554971 TRACP01848 142 aa11.84□□□□□ -0.51
SHOX-204ENST00000554971 CLEC2BQ92478 149 aa11.84□□□□□ -0.51
SHOX-204ENST00000554971 A0A0U1RRA0 63 aa11.84□□□□□ -0.51
SHOX-204ENST00000554971 A0A096LPF7 62 aa11.83□□□□□ -0.52
SHOX-204ENST00000554971 C15orf53Q8NAA6 179 aa11.83□□□□□ -0.52
SHOX-204ENST00000554971 RPL28P46779 137 aaKnown RBP11.82□□□□□ -0.52
SHOX-204ENST00000554971 TOMM7Q9P0U1 55 aa11.82□□□□□ -0.52
SHOX-204ENST00000554971 MIR7-3HGQ8N6C7 128 aa11.82□□□□□ -0.52
SHOX-204ENST00000554971 DNAH10Q8IVF4 4471 aa11.81□□□□□ -0.52
SHOX-204ENST00000554971 IGKV3OR2-268A0A0C4DH90 116 aa11.81□□□□□ -0.52
SHOX-204ENST00000554971 FAM240AA0A1B0GVK7 77 aa11.81□□□□□ -0.52
SHOX-204ENST00000554971 FRAS1Q86XX4 4008 aa11.81□□□□□ -0.52
SHOX-204ENST00000554971 TEX49A0A1B0GTD5 131 aa11.8□□□□□ -0.52
SHOX-204ENST00000554971 CRPP02741 224 aa11.8□□□□□ -0.52
SHOX-204ENST00000554971 XGP55808 180 aa11.8□□□□□ -0.52
SHOX-204ENST00000554971 LINC00158P58513 81 aa11.8□□□□□ -0.52
SHOX-204ENST00000554971 Q8IZM0 81 aa11.8□□□□□ -0.52
SHOX-204ENST00000554971 SND1-IT1Q9HBX3 110 aa11.8□□□□□ -0.52
SHOX-204ENST00000554971 TRAV8-4A0A0B4J246 113 aa11.8□□□□□ -0.52
SHOX-204ENST00000554971 MRPL23Q16540 153 aaKnown RBP11.79□□□□□ -0.52
SHOX-204ENST00000554971 C6orf226Q5I0X4 101 aa11.79□□□□□ -0.52
SHOX-204ENST00000554971 C5orf38Q86SI9 138 aa11.79□□□□□ -0.52
SHOX-204ENST00000554971 LINC00476Q8WZB0 136 aa11.79□□□□□ -0.52
SHOX-204ENST00000554971 A0A1B0GV72 72 aa11.78□□□□□ -0.52
SHOX-204ENST00000554971 MT-ATP8P03928 68 aa11.78□□□□□ -0.52
SHOX-204ENST00000554971 CXCL5P42830 114 aa11.77□□□□□ -0.53
SHOX-204ENST00000554971 H0YGX0 51 aa11.76□□□□□ -0.53
SHOX-204ENST00000554971 ESRGQ1W209 222 aa11.76□□□□□ -0.53
SHOX-204ENST00000554971 CD164L2Q6UWJ8 174 aa11.76□□□□□ -0.53
SHOX-204ENST00000554971 CCL18P55774 89 aa11.76□□□□□ -0.53
SHOX-204ENST00000554971 ACYP1P07311 99 aa11.75□□□□□ -0.53
SHOX-204ENST00000554971 LINC00588Q9Y4M8 146 aa11.75□□□□□ -0.53
SHOX-204ENST00000554971 IGKV2-28A0A075B6P5 120 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms