RNA–Protein interactions for RNA: ENST00000554835.1

PRKCH-210, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-210ENST00000554835 MAP1LC3AQ9H492 121 aa10.71□□□□□ -0.69
PRKCH-210ENST00000554835 A0A1B0GVG6 124 aa10.7□□□□□ -0.7
PRKCH-210ENST00000554835 ALKBH7Q9BT30 221 aaPredicted RBP10.7□□□□□ -0.7
PRKCH-210ENST00000554835 CDKN2A-AS1Q9UH64 79 aa10.7□□□□□ -0.7
PRKCH-210ENST00000554835 NPSP0C0P6 89 aa10.68□□□□□ -0.7
PRKCH-210ENST00000554835 LBHQ53QV2 105 aaPredicted RBP10.68□□□□□ -0.7
PRKCH-210ENST00000554835 TP73-AS1Q9UF72 201 aa10.68□□□□□ -0.7
PRKCH-210ENST00000554835 MUC17Q685J3 4493 aa10.67□□□□□ -0.7
PRKCH-210ENST00000554835 ORMDL2Q53FV1 153 aa10.67□□□□□ -0.7
PRKCH-210ENST00000554835 MRPL55Q7Z7F7 128 aaKnown RBP10.67□□□□□ -0.7
PRKCH-210ENST00000554835 F8VRH5 84 aa10.66□□□□□ -0.7
PRKCH-210ENST00000554835 BCE1O60756 84 aa10.66□□□□□ -0.7
PRKCH-210ENST00000554835 HERVK_113P63121 156 aa10.65□□□□□ -0.7
PRKCH-210ENST00000554835 KRTAP9-2Q9BYQ4 174 aa10.65□□□□□ -0.7
PRKCH-210ENST00000554835 ANAPC11Q9NYG5 84 aa10.65□□□□□ -0.7
PRKCH-210ENST00000554835 RPL37AP8A6NKH3 93 aa10.64□□□□□ -0.71
PRKCH-210ENST00000554835 RPL28P46779 137 aaKnown RBP10.64□□□□□ -0.71
PRKCH-210ENST00000554835 LINC00167Q96N53 147 aa10.64□□□□□ -0.71
PRKCH-210ENST00000554835 K7EMI3 77 aa10.63□□□□□ -0.71
PRKCH-210ENST00000554835 TYMSOSQ8TAI1 123 aa10.63□□□□□ -0.71
PRKCH-210ENST00000554835 SMIM1B2RUZ4 78 aa10.62□□□□□ -0.71
PRKCH-210ENST00000554835 CRYGAP11844 174 aa10.62□□□□□ -0.71
PRKCH-210ENST00000554835 KRTAP13-2Q52LG2 175 aa10.62□□□□□ -0.71
PRKCH-210ENST00000554835 LCE2AQ5TA79 106 aaPredicted RBP10.62□□□□□ -0.71
PRKCH-210ENST00000554835 TIMM17AQ99595 171 aa10.62□□□□□ -0.71
PRKCH-210ENST00000554835 GEMIN7Q9H840 131 aaKnown RBP10.62□□□□□ -0.71
PRKCH-210ENST00000554835 SEC11AP67812 179 aa10.61□□□□□ -0.71
PRKCH-210ENST00000554835 KRTAP13-1Q8IUC0 172 aa10.61□□□□□ -0.71
PRKCH-210ENST00000554835 TOMM6Q96B49 74 aa10.61□□□□□ -0.71
PRKCH-210ENST00000554835 NXT2Q9NPJ8 142 aaKnown RBP10.61□□□□□ -0.71
PRKCH-210ENST00000554835 A0A0U1RQV1 116 aa10.6□□□□□ -0.71
PRKCH-210ENST00000554835 CXCL5P42830 114 aa10.6□□□□□ -0.71
PRKCH-210ENST00000554835 GAGE10A6NGK3 116 aa10.59□□□□□ -0.71
PRKCH-210ENST00000554835 ANAPC16Q96DE5 110 aa10.59□□□□□ -0.71
PRKCH-210ENST00000554835 MT-ND4LP03901 98 aa10.58□□□□□ -0.72
PRKCH-210ENST00000554835 ADCYAP1P18509 176 aa10.58□□□□□ -0.72
PRKCH-210ENST00000554835 PNRC1Q12796 327 aaPredicted RBP10.58□□□□□ -0.72
PRKCH-210ENST00000554835 PAPPA-AS1Q5QFB9 102 aa10.58□□□□□ -0.72
PRKCH-210ENST00000554835 RETNLBQ9BQ08 111 aa10.58□□□□□ -0.72
PRKCH-210ENST00000554835 IGLV5-37A0A075B6J1 123 aa10.57□□□□□ -0.72
PRKCH-210ENST00000554835 IGLV5-45A0A087WSX0 123 aa10.57□□□□□ -0.72
PRKCH-210ENST00000554835 PDZD11Q5EBL8 140 aa10.57□□□□□ -0.72
PRKCH-210ENST00000554835 COX7B2Q8TF08 81 aa10.57□□□□□ -0.72
PRKCH-210ENST00000554835 TINCRA0A1B0GVN0 87 aa10.56□□□□□ -0.72
PRKCH-210ENST00000554835 KIAA1644Q3SXP7 199 aa10.56□□□□□ -0.72
PRKCH-210ENST00000554835 ERASQ7Z444 233 aa10.56□□□□□ -0.72
PRKCH-210ENST00000554835 SCO1O75880 301 aa10.55□□□□□ -0.72
PRKCH-210ENST00000554835 RAB5BP61020 215 aa10.55□□□□□ -0.72
PRKCH-210ENST00000554835 SCGB3A1Q96QR1 104 aa10.54□□□□□ -0.72
PRKCH-210ENST00000554835 SPINK8P0C7L1 97 aa10.53□□□□□ -0.72
PRKCH-210ENST00000554835 G0S2P27469 103 aa10.53□□□□□ -0.72
PRKCH-210ENST00000554835 UBE2AP49459 152 aa10.52□□□□□ -0.73
PRKCH-210ENST00000554835 FAM229BQ4G0N7 80 aa10.52□□□□□ -0.73
PRKCH-210ENST00000554835 CST9LQ9H4G1 147 aa10.52□□□□□ -0.73
PRKCH-210ENST00000554835 IGKV2-28A0A075B6P5 120 aa10.51□□□□□ -0.73
PRKCH-210ENST00000554835 IGKV2D-28P01615 120 aa10.51□□□□□ -0.73
PRKCH-210ENST00000554835 LINC00304Q8N9R0 145 aa10.51□□□□□ -0.73
PRKCH-210ENST00000554835 NKAPP1Q8N9T2 125 aa10.5□□□□□ -0.73
PRKCH-210ENST00000554835 LINC01546A6NGU7 62 aa10.49□□□□□ -0.73
PRKCH-210ENST00000554835 PRLHP81277 87 aa10.49□□□□□ -0.73
PRKCH-210ENST00000554835 TPRXLQ17RH7 258 aa10.47□□□□□ -0.73
PRKCH-210ENST00000554835 TMEM238C9JI98 176 aa10.46□□□□□ -0.73
PRKCH-210ENST00000554835 VPREB1P12018 145 aa10.46□□□□□ -0.73
PRKCH-210ENST00000554835 PMVKQ15126 192 aa10.46□□□□□ -0.73
PRKCH-210ENST00000554835 IGLV7-46A0A075B6I9 117 aa10.45□□□□□ -0.74
PRKCH-210ENST00000554835 PFN2P35080 140 aa10.45□□□□□ -0.74
PRKCH-210ENST00000554835 Q8NDZ9 215 aa10.45□□□□□ -0.74
PRKCH-210ENST00000554835 TMEM126AQ9H061 195 aa10.45□□□□□ -0.74
PRKCH-210ENST00000554835 CDIP1Q9H305 208 aa10.45□□□□□ -0.74
PRKCH-210ENST00000554835 IGKV2D-26A0A0A0MRZ7 120 aa10.44□□□□□ -0.74
PRKCH-210ENST00000554835 IGLV5-39A0A0G2JS06 123 aa10.44□□□□□ -0.74
PRKCH-210ENST00000554835 ATP5LO75964 103 aa10.44□□□□□ -0.74
PRKCH-210ENST00000554835 MRPL18Q9H0U6 180 aaKnown RBP10.44□□□□□ -0.74
PRKCH-210ENST00000554835 SND1-IT1Q9HBX3 110 aa10.44□□□□□ -0.74
PRKCH-210ENST00000554835 M0R378 163 aa10.43□□□□□ -0.74
PRKCH-210ENST00000554835 FAM19A1Q7Z5A9 133 aa10.43□□□□□ -0.74
PRKCH-210ENST00000554835 C3orf22Q8N5N4 141 aa10.43□□□□□ -0.74
PRKCH-210ENST00000554835 LINC01549A6NIU2 74 aa10.42□□□□□ -0.74
PRKCH-210ENST00000554835 PLEKHB2Q96CS7 222 aa10.42□□□□□ -0.74
PRKCH-210ENST00000554835 TRAV9-1A0A075B6T8 112 aa10.41□□□□□ -0.74
PRKCH-210ENST00000554835 H3BRM9 83 aa10.41□□□□□ -0.74
PRKCH-210ENST00000554835 IGLC3P0DOY3 106 aa10.41□□□□□ -0.74
PRKCH-210ENST00000554835 GNB1LQ9BYB4 327 aa10.4□□□□□ -0.74
PRKCH-210ENST00000554835 ERG28Q9UKR5 140 aa10.4□□□□□ -0.74
PRKCH-210ENST00000554835 A0A096LNJ9 63 aa10.39□□□□□ -0.75
PRKCH-210ENST00000554835 ZNF22P17026 224 aaPredicted RBP10.39□□□□□ -0.75
PRKCH-210ENST00000554835 CTAG1AP78358 180 aa10.39□□□□□ -0.75
PRKCH-210ENST00000554835 RAB14P61106 215 aa10.38□□□□□ -0.75
PRKCH-210ENST00000554835 PPDPFQ9H3Y8 114 aa10.38□□□□□ -0.75
PRKCH-210ENST00000554835 KRTAP9-6A0A140TA67 174 aa10.37□□□□□ -0.75
PRKCH-210ENST00000554835 FA2HQ7L5A8 372 aa10.37□□□□□ -0.75
PRKCH-210ENST00000554835 ZNF625Q96I27 306 aaPredicted RBP10.37□□□□□ -0.75
PRKCH-210ENST00000554835 CBLN2Q8IUK8 224 aa10.36□□□□□ -0.75
PRKCH-210ENST00000554835 RPL24P83731 157 aaKnown RBP10.35□□□□□ -0.75
PRKCH-210ENST00000554835 COX17Q14061 63 aa10.35□□□□□ -0.75
PRKCH-210ENST00000554835 URB1-AS1Q96HZ7 61 aa10.35□□□□□ -0.75
PRKCH-210ENST00000554835 TMEM218A2RU14 115 aa10.34□□□□□ -0.75
PRKCH-210ENST00000554835 CLLU1Q5K131 121 aa10.34□□□□□ -0.75
PRKCH-210ENST00000554835 HIGD2AQ9BW72 106 aa10.34□□□□□ -0.75
PRKCH-210ENST00000554835 SMCO4Q9NRQ5 59 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms