RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 C22orf24Q9Y442 160 aa10.27□□□□□ -0.77
PPP4R3A-201ENST00000554308 HERVK_113P63121 156 aa10.27□□□□□ -0.77
PPP4R3A-201ENST00000554308 NBEAL1Q6ZS30 2694 aa10.26□□□□□ -0.77
PPP4R3A-201ENST00000554308 FAM236AA0A1B0GUQ0 79 aa10.26□□□□□ -0.77
PPP4R3A-201ENST00000554308 FAM236BA0A1B0GV22 79 aa10.26□□□□□ -0.77
PPP4R3A-201ENST00000554308 KIR2DL5BQ8NHK3 375 aa10.26□□□□□ -0.77
PPP4R3A-201ENST00000554308 SMIM9A6NGZ8 99 aa10.26□□□□□ -0.77
PPP4R3A-201ENST00000554308 IGHV4-28A0A0C4DH34 117 aa10.24□□□□□ -0.77
PPP4R3A-201ENST00000554308 F5H768 121 aa10.24□□□□□ -0.77
PPP4R3A-201ENST00000554308 BAALC-AS2P0C853 105 aa10.24□□□□□ -0.77
PPP4R3A-201ENST00000554308 Q9HAA7 133 aa10.24□□□□□ -0.77
PPP4R3A-201ENST00000554308 CMYA5Q8N3K9 4069 aa10.24□□□□□ -0.77
PPP4R3A-201ENST00000554308 WIPF1O43516 503 aa10.24□□□□□ -0.77
PPP4R3A-201ENST00000554308 KRTAP10-11P60412 298 aa10.24□□□□□ -0.77
PPP4R3A-201ENST00000554308 A0A096LPF7 62 aa10.23□□□□□ -0.77
PPP4R3A-201ENST00000554308 UBE2L6O14933 153 aa10.23□□□□□ -0.77
PPP4R3A-201ENST00000554308 GYPEP15421 78 aa10.22□□□□□ -0.77
PPP4R3A-201ENST00000554308 TMEM243Q9BU79 118 aa10.22□□□□□ -0.77
PPP4R3A-201ENST00000554308 HERV-K104P63124 156 aa10.21□□□□□ -0.77
PPP4R3A-201ENST00000554308 LINC00612Q8N6U2 182 aa10.21□□□□□ -0.77
PPP4R3A-201ENST00000554308 CDC42SE2Q9NRR3 84 aa10.21□□□□□ -0.77
PPP4R3A-201ENST00000554308 CELA1Q9UNI1 258 aa10.21□□□□□ -0.78
PPP4R3A-201ENST00000554308 IGKV3OR2-268A0A0C4DH90 116 aa10.2□□□□□ -0.78
PPP4R3A-201ENST00000554308 LYRM9A8MSI8 78 aa10.19□□□□□ -0.78
PPP4R3A-201ENST00000554308 TRACP01848 142 aa10.19□□□□□ -0.78
PPP4R3A-201ENST00000554308 DAD1P61803 113 aa10.19□□□□□ -0.78
PPP4R3A-201ENST00000554308 C9orf129Q5T035 196 aaKnown RBP10.19□□□□□ -0.78
PPP4R3A-201ENST00000554308 FAM19A3Q7Z5A8 133 aa10.19□□□□□ -0.78
PPP4R3A-201ENST00000554308 LINC00337Q8N6G1 96 aa10.19□□□□□ -0.78
PPP4R3A-201ENST00000554308 Q8NAQ8 132 aa10.19□□□□□ -0.78
PPP4R3A-201ENST00000554308 PRO0255Q9UI72 69 aa10.19□□□□□ -0.78
PPP4R3A-201ENST00000554308 TRBV6-8A0A0A6YYG3 113 aa10.18□□□□□ -0.78
PPP4R3A-201ENST00000554308 ACYP1P07311 99 aa10.18□□□□□ -0.78
PPP4R3A-201ENST00000554308 HTN3P15516 51 aa10.18□□□□□ -0.78
PPP4R3A-201ENST00000554308 TENM3Q9P273 2699 aa10.18□□□□□ -0.78
PPP4R3A-201ENST00000554308 GAGE2AQ6NT46 116 aa10.18□□□□□ -0.78
PPP4R3A-201ENST00000554308 IGKV2-28A0A075B6P5 120 aa10.17□□□□□ -0.78
PPP4R3A-201ENST00000554308 IGKV2D-28P01615 120 aa10.17□□□□□ -0.78
PPP4R3A-201ENST00000554308 LINC00643Q86TS7 51 aa10.17□□□□□ -0.78
PPP4R3A-201ENST00000554308 MIR7-3HGQ8N6C7 128 aa10.17□□□□□ -0.78
PPP4R3A-201ENST00000554308 TOMM7Q9P0U1 55 aa10.17□□□□□ -0.78
PPP4R3A-201ENST00000554308 MGAM2Q2M2H8 2515 aa10.17□□□□□ -0.78
PPP4R3A-201ENST00000554308 PAX4O43316 350 aa10.17□□□□□ -0.78
PPP4R3A-201ENST00000554308 MIFP14174 115 aa10.17□□□□□ -0.78
PPP4R3A-201ENST00000554308 CSDC2Q9Y534 153 aaKnown RBP10.17□□□□□ -0.78
PPP4R3A-201ENST00000554308 RETNQ9HD89 108 aa10.16□□□□□ -0.78
PPP4R3A-201ENST00000554308 A0A087WYN8 130 aa10.16□□□□□ -0.78
PPP4R3A-201ENST00000554308 IGLV4-60A0A075B6I1 120 aa10.15□□□□□ -0.78
PPP4R3A-201ENST00000554308 COPS9Q8WXC6 57 aa10.15□□□□□ -0.78
PPP4R3A-201ENST00000554308 SDIM1Q6ZPB5 146 aa10.15□□□□□ -0.78
PPP4R3A-201ENST00000554308 CRPP02741 224 aa10.14□□□□□ -0.79
PPP4R3A-201ENST00000554308 SPART-AS1P0CW21 52 aa10.14□□□□□ -0.79
PPP4R3A-201ENST00000554308 MALP21145 153 aa10.14□□□□□ -0.79
PPP4R3A-201ENST00000554308 IMUPQ9GZP8 106 aa10.14□□□□□ -0.79
PPP4R3A-201ENST00000554308 SND1-IT1Q9HBX3 110 aa10.14□□□□□ -0.79
PPP4R3A-201ENST00000554308 ATP5G1P05496 136 aa10.13□□□□□ -0.79
PPP4R3A-201ENST00000554308 RPL28P46779 137 aaKnown RBP10.13□□□□□ -0.79
PPP4R3A-201ENST00000554308 SMIM11BQ8TCY0 68 aa10.13□□□□□ -0.79
PPP4R3A-201ENST00000554308 COX7B2Q8TF08 81 aa10.13□□□□□ -0.79
PPP4R3A-201ENST00000554308 EGFEM1PQ0D2K5 195 aa10.12□□□□□ -0.79
PPP4R3A-201ENST00000554308 PRB2P02812 416 aaPredicted RBP10.12□□□□□ -0.79
PPP4R3A-201ENST00000554308 LINC00158P58513 81 aa10.12□□□□□ -0.79
PPP4R3A-201ENST00000554308 C9orf153Q5TBE3 101 aa10.12□□□□□ -0.79
PPP4R3A-201ENST00000554308 C14orf132Q9NPU4 83 aa10.12□□□□□ -0.79
PPP4R3A-201ENST00000554308 KLK5Q9Y337 293 aaPredicted RBP10.12□□□□□ -0.79
PPP4R3A-201ENST00000554308 TRAV13-2A0A0B4J235 113 aa10.11□□□□□ -0.79
PPP4R3A-201ENST00000554308 CCL18P55774 89 aa10.1□□□□□ -0.79
PPP4R3A-201ENST00000554308 C5orf38Q86SI9 138 aa10.1□□□□□ -0.79
PPP4R3A-201ENST00000554308 C3orf22Q8N5N4 141 aa10.1□□□□□ -0.79
PPP4R3A-201ENST00000554308 PFN2P35080 140 aa10.1□□□□□ -0.79
PPP4R3A-201ENST00000554308 C11orf68Q9H3H3 251 aaKnown RBP10.1□□□□□ -0.79
PPP4R3A-201ENST00000554308 INAFM2P0DMQ5 153 aa10.09□□□□□ -0.79
PPP4R3A-201ENST00000554308 SLPIP03973 132 aa10.09□□□□□ -0.79
PPP4R3A-201ENST00000554308 CLPSL2Q6UWE3 100 aa10.09□□□□□ -0.79
PPP4R3A-201ENST00000554308 TMEM126AQ9H061 195 aa10.08□□□□□ -0.8
PPP4R3A-201ENST00000554308 IGKV3D-7A0A0C4DH55 119 aa10.08□□□□□ -0.8
PPP4R3A-201ENST00000554308 PPDPFQ9H3Y8 114 aa10.08□□□□□ -0.8
PPP4R3A-201ENST00000554308 LECT2O14960 151 aa10.07□□□□□ -0.8
PPP4R3A-201ENST00000554308 DNAL4O96015 105 aa10.07□□□□□ -0.8
PPP4R3A-201ENST00000554308 Q8N3U1 123 aa10.07□□□□□ -0.8
PPP4R3A-201ENST00000554308 NCR3O14931 201 aa10.06□□□□□ -0.8
PPP4R3A-201ENST00000554308 DNAH3Q8TD57 4116 aa10.06□□□□□ -0.8
PPP4R3A-201ENST00000554308 UQCRQO14949 82 aa10.06□□□□□ -0.8
PPP4R3A-201ENST00000554308 IGHV3OR16-9A0A0B4J2B5 98 aa10.05□□□□□ -0.8
PPP4R3A-201ENST00000554308 LINC00526Q96FQ7 95 aa10.05□□□□□ -0.8
PPP4R3A-201ENST00000554308 LINC00846Q9NV44 126 aa10.05□□□□□ -0.8
PPP4R3A-201ENST00000554308 CXCL5P42830 114 aa10.05□□□□□ -0.8
PPP4R3A-201ENST00000554308 OR13C6PQ8NH95 151 aa10.05□□□□□ -0.8
PPP4R3A-201ENST00000554308 C2orf48Q96LS8 159 aa10.05□□□□□ -0.8
PPP4R3A-201ENST00000554308 CYSTM1Q9H1C7 97 aa10.05□□□□□ -0.8
PPP4R3A-201ENST00000554308 A0A087WVE0 104 aa10.04□□□□□ -0.8
PPP4R3A-201ENST00000554308 LOC107984640A0A0U1RRK4 108 aa10.03□□□□□ -0.8
PPP4R3A-201ENST00000554308 XCL1P47992 114 aa10.03□□□□□ -0.8
PPP4R3A-201ENST00000554308 LINC00959A0A1B0GUT2 108 aa10.03□□□□□ -0.8
PPP4R3A-201ENST00000554308 HIST1H4AP62805 103 aaKnown RBP10.03□□□□□ -0.8
PPP4R3A-201ENST00000554308 COX7CP15954 63 aa10.02□□□□□ -0.8
PPP4R3A-201ENST00000554308 Q6ZTC4 211 aa10.02□□□□□ -0.8
PPP4R3A-201ENST00000554308 LINC00269Q8N2A0 174 aa10.02□□□□□ -0.8
PPP4R3A-201ENST00000554308 A0A1B0GUV1 79 aa10.02□□□□□ -0.81
PPP4R3A-201ENST00000554308 MRAPQ8TCY5 172 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms