RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 PDE6GP18545 87 aa6.58□□□□□ -1.36
SIX4-202ENST00000554079 UBE2BP63146 152 aa6.58□□□□□ -1.36
SIX4-202ENST00000554079 LINC00575Q6W349 94 aa6.58□□□□□ -1.36
SIX4-202ENST00000554079 PIEZO2Q9H5I5 2752 aa6.58□□□□□ -1.36
SIX4-202ENST00000554079 DCHS2Q6V1P9 2916 aa6.58□□□□□ -1.36
SIX4-202ENST00000554079 PKD1L2Q7Z442 2459 aa6.57□□□□□ -1.36
SIX4-202ENST00000554079 K7EMT4 169 aa6.57□□□□□ -1.36
SIX4-202ENST00000554079 PRM2P04554 102 aa6.57□□□□□ -1.36
SIX4-202ENST00000554079 IGHV4-38-2P0DP08 117 aa6.57□□□□□ -1.36
SIX4-202ENST00000554079 LMO4P61968 165 aa6.57□□□□□ -1.36
SIX4-202ENST00000554079 SPATA3Q8NHX4 192 aa6.57□□□□□ -1.36
SIX4-202ENST00000554079 MUC7Q8TAX7 377 aa6.57□□□□□ -1.36
SIX4-202ENST00000554079 IGHV4-31P0DP07 118 aa6.57□□□□□ -1.36
SIX4-202ENST00000554079 DEFB109BQ30KR1 87 aa6.57□□□□□ -1.36
SIX4-202ENST00000554079 LCE6AA0A183 80 aa6.56□□□□□ -1.36
SIX4-202ENST00000554079 A8MUN3 132 aa6.56□□□□□ -1.36
SIX4-202ENST00000554079 C19orf84I3L1E1 186 aa6.56□□□□□ -1.36
SIX4-202ENST00000554079 PRB1P04280 392 aa6.56□□□□□ -1.36
SIX4-202ENST00000554079 USMG5Q96IX5 58 aa6.56□□□□□ -1.36
SIX4-202ENST00000554079 UBE2E2Q96LR5 201 aa6.56□□□□□ -1.36
SIX4-202ENST00000554079 ITPR1Q14643 2758 aa6.56□□□□□ -1.36
SIX4-202ENST00000554079 LY6HO94772 140 aa6.55□□□□□ -1.36
SIX4-202ENST00000554079 HTN1P15515 57 aa6.55□□□□□ -1.36
SIX4-202ENST00000554079 GRNP28799 593 aaKnown RBP6.55□□□□□ -1.36
SIX4-202ENST00000554079 APOC4P55056 127 aa6.55□□□□□ -1.36
SIX4-202ENST00000554079 Q5VV11 94 aa6.55□□□□□ -1.36
SIX4-202ENST00000554079 SORL1Q92673 2214 aa6.55□□□□□ -1.36
SIX4-202ENST00000554079 LYRM9A8MSI8 78 aa6.55□□□□□ -1.36
SIX4-202ENST00000554079 PRR3P79522 188 aaKnown RBP6.55□□□□□ -1.36
SIX4-202ENST00000554079 C6orf99Q4VX62 202 aa6.55□□□□□ -1.36
SIX4-202ENST00000554079 IGHV3OR16-9A0A0B4J2B5 98 aa6.54□□□□□ -1.36
SIX4-202ENST00000554079 H3BUA1 57 aa6.54□□□□□ -1.36
SIX4-202ENST00000554079 PSCAO43653 123 aa6.54□□□□□ -1.36
SIX4-202ENST00000554079 LINC01006Q8NI28 216 aa6.54□□□□□ -1.36
SIX4-202ENST00000554079 ATMQ13315 3056 aa6.54□□□□□ -1.36
SIX4-202ENST00000554079 ZFP36P26651 326 aaKnown RBP6.54□□□□□ -1.36
SIX4-202ENST00000554079 Q8N9L7 120 aa6.54□□□□□ -1.36
SIX4-202ENST00000554079 A8MTW9 85 aa6.53□□□□□ -1.36
SIX4-202ENST00000554079 C16orf90A8MZG2 172 aa6.53□□□□□ -1.36
SIX4-202ENST00000554079 ZCCHC13Q8WW36 166 aaKnown RBP6.53□□□□□ -1.36
SIX4-202ENST00000554079 CYP4F30PQ9H0H9 118 aa6.53□□□□□ -1.36
SIX4-202ENST00000554079 BOD1L1Q8NFC6 3051 aa6.52□□□□□ -1.37
SIX4-202ENST00000554079 NDUFS5O43920 106 aa6.52□□□□□ -1.37
SIX4-202ENST00000554079 LINC00612Q8N6U2 182 aa6.52□□□□□ -1.37
SIX4-202ENST00000554079 FAM208BQ5VWN6 2430 aa6.51□□□□□ -1.37
SIX4-202ENST00000554079 A6NN06 94 aa6.51□□□□□ -1.37
SIX4-202ENST00000554079 UBE2AP49459 152 aa6.51□□□□□ -1.37
SIX4-202ENST00000554079 PHF5AQ7RTV0 110 aaKnown RBP6.51□□□□□ -1.37
SIX4-202ENST00000554079 LINC00269Q8N2A0 174 aa6.51□□□□□ -1.37
SIX4-202ENST00000554079 CHD6Q8TD26 2715 aa6.5□□□□□ -1.37
SIX4-202ENST00000554079 ZNF73O43830 326 aaPredicted RBP6.5□□□□□ -1.37
SIX4-202ENST00000554079 IGLV4-60A0A075B6I1 120 aa6.5□□□□□ -1.37
SIX4-202ENST00000554079 H3BQ85 93 aa6.5□□□□□ -1.37
SIX4-202ENST00000554079 UBE2L6O14933 153 aa6.5□□□□□ -1.37
SIX4-202ENST00000554079 Q8NDZ9 215 aa6.5□□□□□ -1.37
SIX4-202ENST00000554079 IGSF10Q6WRI0 2623 aa6.5□□□□□ -1.37
SIX4-202ENST00000554079 TRBV6-8A0A0A6YYG3 113 aa6.49□□□□□ -1.37
SIX4-202ENST00000554079 Q6ZQY7 126 aa6.49□□□□□ -1.37
SIX4-202ENST00000554079 C8orf87E5RJ46 101 aa6.49□□□□□ -1.37
SIX4-202ENST00000554079 PLA2G2AP14555 144 aa6.49□□□□□ -1.37
SIX4-202ENST00000554079 BSNQ9UPA5 3926 aa6.48□□□□□ -1.37
SIX4-202ENST00000554079 IGLV1-40P01703 118 aa6.48□□□□□ -1.37
SIX4-202ENST00000554079 ESM1Q9NQ30 184 aa6.48□□□□□ -1.37
SIX4-202ENST00000554079 LRBAP50851 2863 aa6.48□□□□□ -1.37
SIX4-202ENST00000554079 IGKV3OR2-268A0A0C4DH90 116 aa6.47□□□□□ -1.37
SIX4-202ENST00000554079 C10orf25Q5T742 122 aa6.47□□□□□ -1.37
SIX4-202ENST00000554079 FAM30AQ9NZY2 134 aa6.47□□□□□ -1.37
SIX4-202ENST00000554079 ADGRG4Q8IZF6 3080 aa6.47□□□□□ -1.37
SIX4-202ENST00000554079 COL6A6A6NMZ7 2263 aa6.47□□□□□ -1.37
SIX4-202ENST00000554079 ZFYVE26Q68DK2 2539 aa6.47□□□□□ -1.37
SIX4-202ENST00000554079 COX7BP24311 80 aa6.47□□□□□ -1.37
SIX4-202ENST00000554079 ATP11AUNQ6ZP68 121 aa6.47□□□□□ -1.37
SIX4-202ENST00000554079 SMIM29Q86T20 159 aa6.46□□□□□ -1.38
SIX4-202ENST00000554079 Q8IZM0 81 aa6.46□□□□□ -1.38
SIX4-202ENST00000554079 RELNP78509 3460 aa6.45□□□□□ -1.38
SIX4-202ENST00000554079 DEFB114Q30KQ6 69 aa6.45□□□□□ -1.38
SIX4-202ENST00000554079 LCA10Q71F78 164 aa6.45□□□□□ -1.38
SIX4-202ENST00000554079 CELA1Q9UNI1 258 aa6.45□□□□□ -1.38
SIX4-202ENST00000554079 HCG22E2RYF7 251 aa6.45□□□□□ -1.38
SIX4-202ENST00000554079 TRGV2A0A075B6R0 118 aa6.44□□□□□ -1.38
SIX4-202ENST00000554079 IGHV4-30-2A0A087WSY4 118 aa6.44□□□□□ -1.38
SIX4-202ENST00000554079 CHKB-CPT1BH3BT56 60 aa6.44□□□□□ -1.38
SIX4-202ENST00000554079 J3QKU1 62 aa6.44□□□□□ -1.38
SIX4-202ENST00000554079 C7orf65Q6ZTY9 151 aa6.43□□□□□ -1.38
SIX4-202ENST00000554079 SPTSSBQ8NFR3 76 aa6.43□□□□□ -1.38
SIX4-202ENST00000554079 H3BS24 57 aa6.43□□□□□ -1.38
SIX4-202ENST00000554079 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.43□□□□□ -1.38
SIX4-202ENST00000554079 Q8N9P0 234 aaPredicted RBP6.43□□□□□ -1.38
SIX4-202ENST00000554079 DIRC1Q969H9 104 aa6.43□□□□□ -1.38
SIX4-202ENST00000554079 LINC00959A0A1B0GUT2 108 aa6.42□□□□□ -1.38
SIX4-202ENST00000554079 ATRXP46100 2492 aa6.42□□□□□ -1.38
SIX4-202ENST00000554079 DEFB131AP59861 70 aa6.42□□□□□ -1.38
SIX4-202ENST00000554079 COX17Q14061 63 aa6.42□□□□□ -1.38
SIX4-202ENST00000554079 C11orf71Q6IPW1 123 aa6.42□□□□□ -1.38
SIX4-202ENST00000554079 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.42□□□□□ -1.38
SIX4-202ENST00000554079 TRGV1A0A0A0MS02 117 aa6.42□□□□□ -1.38
SIX4-202ENST00000554079 IGLV6-57P01721 117 aa6.42□□□□□ -1.38
SIX4-202ENST00000554079 IGHV4-30-4P0DP06 118 aa6.42□□□□□ -1.38
SIX4-202ENST00000554079 PRR4Q16378 134 aa6.42□□□□□ -1.38
SIX4-202ENST00000554079 CR1P17927 2039 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms