RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 C6orf201Q7Z4U5 140 aa1.31□□□□□ -2.2
SCFD1-210ENST00000553693 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.31□□□□□ -2.2
SCFD1-210ENST00000553693 OR5AK2Q8NH90 309 aa1.31□□□□□ -2.2
SCFD1-210ENST00000553693 TMEM167AQ8TBQ9 72 aa1.31□□□□□ -2.2
SCFD1-210ENST00000553693 CHCHD1Q96BP2 118 aaKnown RBP1.31□□□□□ -2.2
SCFD1-210ENST00000553693 TMEM126AQ9H061 195 aa1.31□□□□□ -2.2
SCFD1-210ENST00000553693 NAT8BQ9UHF3 227 aa1.31□□□□□ -2.2
SCFD1-210ENST00000553693 RABAC1Q9UI14 185 aa1.31□□□□□ -2.2
SCFD1-210ENST00000553693 TNXBP22105 4242 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 TRAV2A0A0B4J234 112 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 IGLC7A0M8Q6 106 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 IGKV2-29A2NJV5 120 aaPredicted RBP1.3□□□□□ -2.2
SCFD1-210ENST00000553693 TMEM189A5PLL7 270 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 K7EIM0 57 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 DHFRP00374 187 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 CXCL1P09341 107 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 DEFB130BP0DP73 79 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 DEFB130AP0DP74 79 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 SDC2P34741 201 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 DEFB1P60022 68 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 PPP3R1P63098 170 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 WT1-ASQ06250 92 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 MSMO1Q15800 293 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 PSMG4Q5JS54 123 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 FAM74A1Q5RGS3 127 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 LELP1Q5T871 98 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 DEFB107AQ8IZN7 70 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 ACBD7Q8N6N7 88 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 TP53RKQ96S44 253 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 MED9Q9NWA0 146 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 MUC2Q02817 5179 aa1.3□□□□□ -2.2
SCFD1-210ENST00000553693 IGKV2-40A0A087WW87 121 aaPredicted RBP1.29□□□□□ -2.2
SCFD1-210ENST00000553693 TRBV6-7A0A0A0MS04 114 aa1.29□□□□□ -2.2
SCFD1-210ENST00000553693 TRAV12-1A0A0B4J245 112 aa1.29□□□□□ -2.2
SCFD1-210ENST00000553693 A0A0J9YY99 117 aa1.29□□□□□ -2.2
SCFD1-210ENST00000553693 IGKV2D-40P01614 121 aaPredicted RBP1.29□□□□□ -2.2
SCFD1-210ENST00000553693 CD2P06729 351 aa1.29□□□□□ -2.2
SCFD1-210ENST00000553693 S100A11P31949 105 aa1.29□□□□□ -2.2
SCFD1-210ENST00000553693 QRFPP83859 136 aa1.29□□□□□ -2.2
SCFD1-210ENST00000553693 CIRBPQ14011 172 aaKnown RBP1.29□□□□□ -2.2
SCFD1-210ENST00000553693 SURF2Q15527 256 aaPredicted RBP1.29□□□□□ -2.2
SCFD1-210ENST00000553693 Q56UQ5 140 aa1.29□□□□□ -2.2
SCFD1-210ENST00000553693 GDF5OSQ5U4N7 250 aa1.29□□□□□ -2.2
SCFD1-210ENST00000553693 TEX261Q6UWH6 196 aa1.29□□□□□ -2.2
SCFD1-210ENST00000553693 Q6ZSA8 131 aa1.29□□□□□ -2.2
SCFD1-210ENST00000553693 C9orf163Q8N9P6 203 aa1.29□□□□□ -2.2
SCFD1-210ENST00000553693 OR4B1Q8NGF8 309 aa1.29□□□□□ -2.2
SCFD1-210ENST00000553693 SPACA4Q8TDM5 124 aa1.29□□□□□ -2.2
SCFD1-210ENST00000553693 MAFIPQ8WZ33 124 aa1.29□□□□□ -2.2
SCFD1-210ENST00000553693 RETNLBQ9BQ08 111 aa1.29□□□□□ -2.2
SCFD1-210ENST00000553693 SLC35B3Q9H1N7 401 aa1.29□□□□□ -2.2
SCFD1-210ENST00000553693 U3KQ87 197 aa1.29□□□□□ -2.2
SCFD1-210ENST00000553693 LPAP08519 4548 aa1.28□□□□□ -2.2
SCFD1-210ENST00000553693 TRDV1A0A1B0GX56 115 aa1.28□□□□□ -2.2
SCFD1-210ENST00000553693 CCDC160A6NGH7 325 aa1.28□□□□□ -2.2
SCFD1-210ENST00000553693 TMEM14DPA8MWL7 114 aa1.28□□□□□ -2.2
SCFD1-210ENST00000553693 I3L2K1 104 aa1.28□□□□□ -2.2
SCFD1-210ENST00000553693 GNG7O60262 68 aa1.28□□□□□ -2.2
SCFD1-210ENST00000553693 TRAPPC2P0DI81 140 aa1.28□□□□□ -2.2
SCFD1-210ENST00000553693 TRAPPC2BP0DI82 140 aa1.28□□□□□ -2.2
SCFD1-210ENST00000553693 HLA-DRB4P13762 266 aa1.28□□□□□ -2.2
SCFD1-210ENST00000553693 MRPS36P82909 103 aaKnown RBP1.28□□□□□ -2.2
SCFD1-210ENST00000553693 INSL4Q14641 139 aa1.28□□□□□ -2.2
SCFD1-210ENST00000553693 TEN1Q86WV5 123 aa1.28□□□□□ -2.2
SCFD1-210ENST00000553693 VSTM2AQ8TAG5 236 aa1.28□□□□□ -2.2
SCFD1-210ENST00000553693 ARHGAP5-AS1Q96IT6 56 aa1.28□□□□□ -2.2
SCFD1-210ENST00000553693 LPAR5Q9H1C0 372 aa1.28□□□□□ -2.2
SCFD1-210ENST00000553693 NDUFA4L2Q9NRX3 87 aa1.28□□□□□ -2.2
SCFD1-210ENST00000553693 BET1LQ9NYM9 111 aa1.28□□□□□ -2.2
SCFD1-210ENST00000553693 MRPL36Q9P0J6 103 aaKnown RBP1.28□□□□□ -2.2
SCFD1-210ENST00000553693 HLA-DRB4X5D2U9 266 aa1.28□□□□□ -2.2
SCFD1-210ENST00000553693 A0A096LPF7 62 aa1.27□□□□□ -2.21
SCFD1-210ENST00000553693 IGKV3D-7A0A0C4DH55 119 aa1.27□□□□□ -2.21
SCFD1-210ENST00000553693 IGKV3OR2-268A0A0C4DH90 116 aa1.27□□□□□ -2.21
SCFD1-210ENST00000553693 PNMA8CA0A1B0GUJ8 204 aa1.27□□□□□ -2.21
SCFD1-210ENST00000553693 TCRBV3S1A0A5B6 114 aa1.27□□□□□ -2.21
SCFD1-210ENST00000553693 GABARAPH6UMI1 98 aa1.27□□□□□ -2.21
SCFD1-210ENST00000553693 K7ERJ3 54 aa1.27□□□□□ -2.21
SCFD1-210ENST00000553693 ERC2-IT1O76042 136 aa1.27□□□□□ -2.21
SCFD1-210ENST00000553693 SNRPD3P62318 126 aaKnown RBP1.27□□□□□ -2.21
SCFD1-210ENST00000553693 PSG9Q00887 426 aa1.27□□□□□ -2.21
SCFD1-210ENST00000553693 PDE6HQ13956 83 aa1.27□□□□□ -2.21
SCFD1-210ENST00000553693 CCDC58Q4VC31 144 aa1.27□□□□□ -2.21
SCFD1-210ENST00000553693 LINC00305Q7Z4B0 112 aa1.27□□□□□ -2.21
SCFD1-210ENST00000553693 PRR15Q8IV56 129 aa1.27□□□□□ -2.21
SCFD1-210ENST00000553693 Q8N814 137 aa1.27□□□□□ -2.21
SCFD1-210ENST00000553693 OR5H6Q8NGV6 325 aa1.27□□□□□ -2.21
SCFD1-210ENST00000553693 LSM10Q969L4 123 aaKnown RBP1.27□□□□□ -2.21
SCFD1-210ENST00000553693 RAB37Q96AX2 223 aa1.27□□□□□ -2.21
SCFD1-210ENST00000553693 ZNF625Q96I27 306 aaPredicted RBP1.27□□□□□ -2.21
SCFD1-210ENST00000553693 LINC00052Q96N35 136 aa1.27□□□□□ -2.21
SCFD1-210ENST00000553693 NOP10Q9NPE3 64 aaKnown RBP1.27□□□□□ -2.21
SCFD1-210ENST00000553693 TAS2R8Q9NYW2 309 aa1.27□□□□□ -2.21
SCFD1-210ENST00000553693 TPRKBQ9Y3C4 175 aa1.27□□□□□ -2.21
SCFD1-210ENST00000553693 TRAV12-2A0A075B6T6 113 aa1.26□□□□□ -2.21
SCFD1-210ENST00000553693 A0A087WX48 190 aa1.26□□□□□ -2.21
SCFD1-210ENST00000553693 TRBV6-8A0A0A6YYG3 113 aa1.26□□□□□ -2.21
SCFD1-210ENST00000553693 TRAV13-1A0A0B4J241 112 aa1.26□□□□□ -2.21
SCFD1-210ENST00000553693 H3BNG1 76 aa1.26□□□□□ -2.21
SCFD1-210ENST00000553693 J3KT08 172 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms