RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 SETXQ7Z333 2677 aaKnown RBP3.67□□□□□ -1.82
TMEM55B-204ENST00000553602 TRGV4A0A0C4DH28 118 aa3.66□□□□□ -1.82
TMEM55B-204ENST00000553602 IGHV4-28A0A0C4DH34 117 aa3.66□□□□□ -1.82
TMEM55B-204ENST00000553602 LINC00959A0A1B0GUT2 108 aa3.66□□□□□ -1.82
TMEM55B-204ENST00000553602 SMIM9A6NGZ8 99 aa3.66□□□□□ -1.82
TMEM55B-204ENST00000553602 JMJD7-PLA2G4BH0Y9G9 81 aa3.66□□□□□ -1.82
TMEM55B-204ENST00000553602 H3BQ85 93 aa3.66□□□□□ -1.82
TMEM55B-204ENST00000553602 CRYGAP11844 174 aa3.66□□□□□ -1.82
TMEM55B-204ENST00000553602 LINC00158P58513 81 aa3.66□□□□□ -1.82
TMEM55B-204ENST00000553602 ANKRD17O75179 2603 aaKnown RBP3.65□□□□□ -1.82
TMEM55B-204ENST00000553602 IGLV4-60A0A075B6I1 120 aa3.65□□□□□ -1.83
TMEM55B-204ENST00000553602 A0A087WYN8 130 aa3.65□□□□□ -1.83
TMEM55B-204ENST00000553602 TRBV10-3A0A0K0K1G6 114 aa3.65□□□□□ -1.83
TMEM55B-204ENST00000553602 LOC100131303A0A0U1RQF7 123 aa3.65□□□□□ -1.83
TMEM55B-204ENST00000553602 A0A0U1RRA0 63 aa3.65□□□□□ -1.83
TMEM55B-204ENST00000553602 RPL18AQ02543 176 aaKnown RBP3.65□□□□□ -1.83
TMEM55B-204ENST00000553602 SS18Q15532 418 aa3.65□□□□□ -1.83
TMEM55B-204ENST00000553602 C9orf153Q5TBE3 101 aa3.65□□□□□ -1.83
TMEM55B-204ENST00000553602 GAGE2AQ6NT46 116 aa3.65□□□□□ -1.83
TMEM55B-204ENST00000553602 MAPK1IP1LQ8NDC0 245 aa3.65□□□□□ -1.83
TMEM55B-204ENST00000553602 CHCHD5Q9BSY4 110 aa3.65□□□□□ -1.83
TMEM55B-204ENST00000553602 ORMDL1Q9P0S3 153 aa3.65□□□□□ -1.83
TMEM55B-204ENST00000553602 TENM4Q6N022 2769 aa3.65□□□□□ -1.83
TMEM55B-204ENST00000553602 LECT2O14960 151 aa3.64□□□□□ -1.83
TMEM55B-204ENST00000553602 BCE1O60756 84 aa3.64□□□□□ -1.83
TMEM55B-204ENST00000553602 CCKP06307 115 aa3.64□□□□□ -1.83
TMEM55B-204ENST00000553602 RPS28P62857 69 aaKnown RBP3.64□□□□□ -1.83
TMEM55B-204ENST00000553602 C2orf48Q96LS8 159 aa3.64□□□□□ -1.83
TMEM55B-204ENST00000553602 Q9HAA7 133 aa3.64□□□□□ -1.83
TMEM55B-204ENST00000553602 NOTCH2Q04721 2471 aa3.64□□□□□ -1.83
TMEM55B-204ENST00000553602 CSPG4Q6UVK1 2322 aa3.64□□□□□ -1.83
TMEM55B-204ENST00000553602 LYRM9A8MSI8 78 aa3.63□□□□□ -1.83
TMEM55B-204ENST00000553602 TMEM256-PLSCR3K7ERE1 68 aa3.63□□□□□ -1.83
TMEM55B-204ENST00000553602 TMEM258P61165 79 aa3.63□□□□□ -1.83
TMEM55B-204ENST00000553602 C6orf226Q5I0X4 101 aa3.63□□□□□ -1.83
TMEM55B-204ENST00000553602 CD164L2Q6UWJ8 174 aa3.63□□□□□ -1.83
TMEM55B-204ENST00000553602 LYPD5Q6UWN5 251 aa3.63□□□□□ -1.83
TMEM55B-204ENST00000553602 SMIM20Q8N5G0 67 aa3.63□□□□□ -1.83
TMEM55B-204ENST00000553602 SERP2Q8N6R1 65 aa3.63□□□□□ -1.83
TMEM55B-204ENST00000553602 LINC01006Q8NI28 216 aa3.63□□□□□ -1.83
TMEM55B-204ENST00000553602 ESM1Q9NQ30 184 aa3.63□□□□□ -1.83
TMEM55B-204ENST00000553602 TOMM7Q9P0U1 55 aa3.63□□□□□ -1.83
TMEM55B-204ENST00000553602 PRO0255Q9UI72 69 aa3.63□□□□□ -1.83
TMEM55B-204ENST00000553602 RELNP78509 3460 aa3.63□□□□□ -1.83
TMEM55B-204ENST00000553602 NBPF19A0A087WUL8 3843 aa3.62□□□□□ -1.83
TMEM55B-204ENST00000553602 KRTAP23-1A1A580 65 aa3.62□□□□□ -1.83
TMEM55B-204ENST00000553602 NDUFC2-KCTD14E9PQ53 114 aa3.62□□□□□ -1.83
TMEM55B-204ENST00000553602 J3KT08 172 aa3.62□□□□□ -1.83
TMEM55B-204ENST00000553602 NANOS2P60321 138 aaKnown RBP3.62□□□□□ -1.83
TMEM55B-204ENST00000553602 KRTAP10-9P60411 292 aa3.62□□□□□ -1.83
TMEM55B-204ENST00000553602 KIAA0087Q14695 138 aa3.62□□□□□ -1.83
TMEM55B-204ENST00000553602 Q8N814 137 aa3.62□□□□□ -1.83
TMEM55B-204ENST00000553602 C14orf132Q9NPU4 83 aa3.62□□□□□ -1.83
TMEM55B-204ENST00000553602 LINC00846Q9NV44 126 aa3.62□□□□□ -1.83
TMEM55B-204ENST00000553602 CENPEQ02224 2701 aa3.61□□□□□ -1.83
TMEM55B-204ENST00000553602 COL12A1Q99715 3063 aa3.61□□□□□ -1.83
TMEM55B-204ENST00000553602 MYO9AB2RTY4 2548 aa3.61□□□□□ -1.83
TMEM55B-204ENST00000553602 LOC110117498A0A087WWA1 95 aa3.61□□□□□ -1.83
TMEM55B-204ENST00000553602 GVQW2A0A096LPI5 108 aaPredicted RBP3.61□□□□□ -1.83
TMEM55B-204ENST00000553602 hADV29S1A0JD25 119 aa3.61□□□□□ -1.83
TMEM55B-204ENST00000553602 RPL35AP18077 110 aaKnown RBP3.61□□□□□ -1.83
TMEM55B-204ENST00000553602 PDE6GP18545 87 aa3.61□□□□□ -1.83
TMEM55B-204ENST00000553602 HILS1P60008 231 aa3.61□□□□□ -1.83
TMEM55B-204ENST00000553602 KRTAP1-1Q07627 177 aa3.61□□□□□ -1.83
TMEM55B-204ENST00000553602 KRTAP19-1Q8IUB9 90 aa3.61□□□□□ -1.83
TMEM55B-204ENST00000553602 SORL1Q92673 2214 aa3.6□□□□□ -1.83
TMEM55B-204ENST00000553602 UNC79Q9P2D8 2635 aa3.6□□□□□ -1.83
TMEM55B-204ENST00000553602 A0A0J9YWU9 116 aa3.6□□□□□ -1.83
TMEM55B-204ENST00000553602 USP17L23D6RBM5 183 aa3.6□□□□□ -1.83
TMEM55B-204ENST00000553602 IGHV4-30-4P0DP06 118 aa3.6□□□□□ -1.83
TMEM55B-204ENST00000553602 PFN2P35080 140 aa3.6□□□□□ -1.83
TMEM55B-204ENST00000553602 C9orf129Q5T035 196 aaKnown RBP3.6□□□□□ -1.83
TMEM55B-204ENST00000553602 C9orf66Q5T8R8 295 aa3.6□□□□□ -1.83
TMEM55B-204ENST00000553602 CFAP161Q6P656 301 aa3.6□□□□□ -1.83
TMEM55B-204ENST00000553602 OR13C6PQ8NH95 151 aa3.6□□□□□ -1.83
TMEM55B-204ENST00000553602 UPK3BQ9BT76 320 aa3.6□□□□□ -1.83
TMEM55B-204ENST00000553602 WFDC10AQ9H1F0 79 aa3.6□□□□□ -1.83
TMEM55B-204ENST00000553602 ABCA12Q86UK0 2595 aa3.6□□□□□ -1.83
TMEM55B-204ENST00000553602 C2CD3Q4AC94 2353 aa3.6□□□□□ -1.83
TMEM55B-204ENST00000553602 ITPR2Q14571 2701 aa3.59□□□□□ -1.83
TMEM55B-204ENST00000553602 CSMD1Q96PZ7 3565 aa3.59□□□□□ -1.83
TMEM55B-204ENST00000553602 SPG11Q96JI7 2443 aa3.59□□□□□ -1.83
TMEM55B-204ENST00000553602 CCDC168Q8NDH2 2452 aa3.59□□□□□ -1.83
TMEM55B-204ENST00000553602 TRBV7-6A0A0J9YX20 115 aa3.59□□□□□ -1.83
TMEM55B-204ENST00000553602 NCR3O14931 201 aa3.59□□□□□ -1.83
TMEM55B-204ENST00000553602 XCL1P47992 114 aa3.59□□□□□ -1.83
TMEM55B-204ENST00000553602 LINC00575Q6W349 94 aa3.59□□□□□ -1.83
TMEM55B-204ENST00000553602 C6orf223Q8N319 242 aa3.59□□□□□ -1.83
TMEM55B-204ENST00000553602 CHCHD10Q8WYQ3 142 aaPredicted RBP3.59□□□□□ -1.83
TMEM55B-204ENST00000553602 UBL5Q9BZL1 73 aa3.59□□□□□ -1.83
TMEM55B-204ENST00000553602 PRR34Q9NV39 138 aa3.59□□□□□ -1.83
TMEM55B-204ENST00000553602 CELSR1Q9NYQ6 3014 aa3.59□□□□□ -1.84
TMEM55B-204ENST00000553602 F8P00451 2351 aa3.59□□□□□ -1.84
TMEM55B-204ENST00000553602 CRYBG3Q68DQ2 2970 aa3.58□□□□□ -1.84
TMEM55B-204ENST00000553602 IGKV3OR2-268A0A0C4DH90 116 aa3.58□□□□□ -1.84
TMEM55B-204ENST00000553602 IGLV6-57P01721 117 aa3.58□□□□□ -1.84
TMEM55B-204ENST00000553602 REG3AQ06141 175 aa3.58□□□□□ -1.84
TMEM55B-204ENST00000553602 Q6ZQT0 140 aa3.58□□□□□ -1.84
TMEM55B-204ENST00000553602 WFDC11Q8NEX6 87 aa3.58□□□□□ -1.84
TMEM55B-204ENST00000553602 F8WDY8 70 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms