RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 C10orf126Q8N4M7 172 aa3.85□□□□□ -1.79
SMARCC2-213ENST00000552627 RASL10AQ92737 203 aa3.85□□□□□ -1.79
SMARCC2-213ENST00000552627 C9orf85Q96MD7 179 aa3.85□□□□□ -1.79
SMARCC2-213ENST00000552627 CSDC2Q9Y534 153 aaKnown RBP3.85□□□□□ -1.79
SMARCC2-213ENST00000552627 IGLV2-18A0A075B6J9 118 aa3.84□□□□□ -1.79
SMARCC2-213ENST00000552627 A0A096LPF7 62 aa3.84□□□□□ -1.79
SMARCC2-213ENST00000552627 TRAV8-4A0A0B4J246 113 aa3.84□□□□□ -1.79
SMARCC2-213ENST00000552627 A0A0B4J2C4 111 aa3.84□□□□□ -1.79
SMARCC2-213ENST00000552627 TRGV4A0A0C4DH28 118 aa3.84□□□□□ -1.79
SMARCC2-213ENST00000552627 LOC107984156A0A0G2JMH3 177 aa3.84□□□□□ -1.79
SMARCC2-213ENST00000552627 LOC100131303A0A0U1RQF7 123 aa3.84□□□□□ -1.79
SMARCC2-213ENST00000552627 H3BT86 120 aa3.84□□□□□ -1.79
SMARCC2-213ENST00000552627 M0R2N4 97 aa3.84□□□□□ -1.79
SMARCC2-213ENST00000552627 PPP1R17O96001 155 aa3.84□□□□□ -1.79
SMARCC2-213ENST00000552627 S100A4P26447 101 aaKnown RBP3.84□□□□□ -1.79
SMARCC2-213ENST00000552627 ATXN8Q156A1 80 aa3.84□□□□□ -1.79
SMARCC2-213ENST00000552627 ZNF876PQ49A33 203 aa3.84□□□□□ -1.79
SMARCC2-213ENST00000552627 TMEM170BQ5T4T1 132 aa3.84□□□□□ -1.79
SMARCC2-213ENST00000552627 ARL17AQ8IVW1 177 aa3.84□□□□□ -1.79
SMARCC2-213ENST00000552627 TMEM101Q96IK0 257 aa3.84□□□□□ -1.79
SMARCC2-213ENST00000552627 JPT2Q9H910 190 aa3.84□□□□□ -1.79
SMARCC2-213ENST00000552627 MRPL35Q9NZE8 188 aaKnown RBP3.84□□□□□ -1.79
SMARCC2-213ENST00000552627 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.83□□□□□ -1.8
SMARCC2-213ENST00000552627 TRAV4A0A0B4J268 109 aa3.83□□□□□ -1.8
SMARCC2-213ENST00000552627 M0R381 172 aa3.83□□□□□ -1.8
SMARCC2-213ENST00000552627 UQCRQO14949 82 aa3.83□□□□□ -1.8
SMARCC2-213ENST00000552627 RS1O15537 224 aa3.83□□□□□ -1.8
SMARCC2-213ENST00000552627 TCL1BO95988 128 aa3.83□□□□□ -1.8
SMARCC2-213ENST00000552627 KRTAP10-7P60409 375 aaPredicted RBP3.83□□□□□ -1.8
SMARCC2-213ENST00000552627 SRSF9Q13242 221 aaKnown RBP eCLIP3.83□□□□□ -1.8
SMARCC2-213ENST00000552627 MAPKAPK5-AS1Q8N8E1 139 aa3.83□□□□□ -1.8
SMARCC2-213ENST00000552627 C15orf53Q8NAA6 179 aa3.83□□□□□ -1.8
SMARCC2-213ENST00000552627 ZNRF2Q8NHG8 242 aa3.83□□□□□ -1.8
SMARCC2-213ENST00000552627 RNF185Q96GF1 192 aa3.83□□□□□ -1.8
SMARCC2-213ENST00000552627 TPPP3Q9BW30 176 aa3.83□□□□□ -1.8
SMARCC2-213ENST00000552627 PRO1854Q9UHT4 67 aa3.83□□□□□ -1.8
SMARCC2-213ENST00000552627 LINC00588Q9Y4M8 146 aa3.83□□□□□ -1.8
SMARCC2-213ENST00000552627 TRBV10-2A0A0K0K1G8 114 aa3.82□□□□□ -1.8
SMARCC2-213ENST00000552627 ZNF815PA8K554 130 aa3.82□□□□□ -1.8
SMARCC2-213ENST00000552627 CXCL5P42830 114 aa3.82□□□□□ -1.8
SMARCC2-213ENST00000552627 ESRGQ1W209 222 aa3.82□□□□□ -1.8
SMARCC2-213ENST00000552627 FAM74A4Q5TZK3 123 aa3.82□□□□□ -1.8
SMARCC2-213ENST00000552627 SCGB1D4Q6XE38 83 aa3.82□□□□□ -1.8
SMARCC2-213ENST00000552627 C3orf22Q8N5N4 141 aa3.82□□□□□ -1.8
SMARCC2-213ENST00000552627 UBE2WQ96B02 151 aa3.82□□□□□ -1.8
SMARCC2-213ENST00000552627 TOMM6Q96B49 74 aa3.82□□□□□ -1.8
SMARCC2-213ENST00000552627 LINC00526Q96FQ7 95 aa3.82□□□□□ -1.8
SMARCC2-213ENST00000552627 Q9UF83 564 aa3.82□□□□□ -1.8
SMARCC2-213ENST00000552627 PRO0255Q9UI72 69 aa3.82□□□□□ -1.8
SMARCC2-213ENST00000552627 PHLDA3Q9Y5J5 127 aa3.82□□□□□ -1.8
SMARCC2-213ENST00000552627 DNAH6Q9C0G6 4158 aa3.81□□□□□ -1.8
SMARCC2-213ENST00000552627 KMT2AQ03164 3969 aa3.81□□□□□ -1.8
SMARCC2-213ENST00000552627 EPPK1P58107 5090 aaKnown RBP3.81□□□□□ -1.8
SMARCC2-213ENST00000552627 TRBV30A0A0K0K1B3 111 aa3.81□□□□□ -1.8
SMARCC2-213ENST00000552627 H3BNG1 76 aa3.81□□□□□ -1.8
SMARCC2-213ENST00000552627 K7EQD1 137 aa3.81□□□□□ -1.8
SMARCC2-213ENST00000552627 GATA1P15976 413 aaPredicted RBP3.81□□□□□ -1.8
SMARCC2-213ENST00000552627 CCL18P55774 89 aa3.81□□□□□ -1.8
SMARCC2-213ENST00000552627 LINC01620Q4KN68 170 aa3.81□□□□□ -1.8
SMARCC2-213ENST00000552627 C14orf178Q8N769 122 aaPredicted RBP3.81□□□□□ -1.8
SMARCC2-213ENST00000552627 SLC25A29Q8N8R3 303 aa3.81□□□□□ -1.8
SMARCC2-213ENST00000552627 PRADC1Q9BSG0 188 aa3.81□□□□□ -1.8
SMARCC2-213ENST00000552627 TTTY13Q9BZ97 58 aa3.81□□□□□ -1.8
SMARCC2-213ENST00000552627 ICOSQ9Y6W8 199 aa3.81□□□□□ -1.8
SMARCC2-213ENST00000552627 DNAH10Q8IVF4 4471 aa3.8□□□□□ -1.8
SMARCC2-213ENST00000552627 C11orf86A6NJI1 115 aa3.8□□□□□ -1.8
SMARCC2-213ENST00000552627 C9JAW5 83 aa3.8□□□□□ -1.8
SMARCC2-213ENST00000552627 IGHV3-30P01768 117 aa3.8□□□□□ -1.8
SMARCC2-213ENST00000552627 COX6CP09669 75 aa3.8□□□□□ -1.8
SMARCC2-213ENST00000552627 CFC1BP0CG36 223 aa3.8□□□□□ -1.8
SMARCC2-213ENST00000552627 CFC1P0CG37 223 aa3.8□□□□□ -1.8
SMARCC2-213ENST00000552627 IGHV3-30-5P0DP03 117 aa3.8□□□□□ -1.8
SMARCC2-213ENST00000552627 PMVKQ15126 192 aa3.8□□□□□ -1.8
SMARCC2-213ENST00000552627 C9orf153Q5TBE3 101 aa3.8□□□□□ -1.8
SMARCC2-213ENST00000552627 LYPD5Q6UWN5 251 aa3.8□□□□□ -1.8
SMARCC2-213ENST00000552627 ZFP2Q6ZN57 461 aa3.8□□□□□ -1.8
SMARCC2-213ENST00000552627 BAALCQ8WXS3 180 aa3.8□□□□□ -1.8
SMARCC2-213ENST00000552627 SCGB3A1Q96QR1 104 aa3.8□□□□□ -1.8
SMARCC2-213ENST00000552627 KIR2DL4Q99706 377 aa3.8□□□□□ -1.8
SMARCC2-213ENST00000552627 SMIM2Q9BVW6 85 aa3.8□□□□□ -1.8
SMARCC2-213ENST00000552627 PPDPFQ9H3Y8 114 aa3.8□□□□□ -1.8
SMARCC2-213ENST00000552627 DNAH2Q9P225 4427 aa3.79□□□□□ -1.8
SMARCC2-213ENST00000552627 SDHAF1A6NFY7 115 aa3.79□□□□□ -1.8
SMARCC2-213ENST00000552627 NXPH4O95158 308 aa3.79□□□□□ -1.8
SMARCC2-213ENST00000552627 IGHV3-33P01772 117 aa3.79□□□□□ -1.8
SMARCC2-213ENST00000552627 CRYGDP07320 174 aa3.79□□□□□ -1.8
SMARCC2-213ENST00000552627 CRYGAP11844 174 aa3.79□□□□□ -1.8
SMARCC2-213ENST00000552627 SEC61BP60468 96 aaKnown RBP3.79□□□□□ -1.8
SMARCC2-213ENST00000552627 TMEM258P61165 79 aa3.79□□□□□ -1.8
SMARCC2-213ENST00000552627 RHOHQ15669 191 aa3.79□□□□□ -1.8
SMARCC2-213ENST00000552627 SPANXN1Q5VSR9 72 aa3.79□□□□□ -1.8
SMARCC2-213ENST00000552627 Q6ZR54 194 aa3.79□□□□□ -1.8
SMARCC2-213ENST00000552627 LINC00643Q86TS7 51 aa3.79□□□□□ -1.8
SMARCC2-213ENST00000552627 WFDC10BQ8IUB3 73 aa3.79□□□□□ -1.8
SMARCC2-213ENST00000552627 TMEM141Q96I45 108 aa3.79□□□□□ -1.8
SMARCC2-213ENST00000552627 FRAS1Q86XX4 4008 aa3.79□□□□□ -1.8
SMARCC2-213ENST00000552627 NBDYA0A0U1RRE5 68 aa3.78□□□□□ -1.8
SMARCC2-213ENST00000552627 TRBV6-4A0A1B0GX49 114 aa3.78□□□□□ -1.8
SMARCC2-213ENST00000552627 SMKR1H3BMG3 65 aa3.78□□□□□ -1.8
SMARCC2-213ENST00000552627 ATOX1O00244 68 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms