RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 LINC01546A6NGU7 62 aa6.75□□□□□ -1.33
TMEM116-215ENST00000552374 LINC01549A6NIU2 74 aa6.75□□□□□ -1.33
TMEM116-215ENST00000552374 SRSF9Q13242 221 aaKnown RBP eCLIP6.75□□□□□ -1.33
TMEM116-215ENST00000552374 NDUFA5Q16718 116 aa6.75□□□□□ -1.33
TMEM116-215ENST00000552374 SPINK6Q6UWN8 80 aa6.75□□□□□ -1.33
TMEM116-215ENST00000552374 FAM19A5Q7Z5A7 132 aaPredicted RBP6.75□□□□□ -1.33
TMEM116-215ENST00000552374 LINC00469Q8N7U9 141 aa6.75□□□□□ -1.33
TMEM116-215ENST00000552374 SVIPQ8NHG7 77 aa6.75□□□□□ -1.33
TMEM116-215ENST00000552374 CST9LQ9H4G1 147 aa6.75□□□□□ -1.33
TMEM116-215ENST00000552374 PSORS1C2Q9UIG4 136 aa6.75□□□□□ -1.33
TMEM116-215ENST00000552374 NDUFC2-KCTD14E9PQ53 114 aa6.74□□□□□ -1.33
TMEM116-215ENST00000552374 SNAPINO95295 136 aa6.74□□□□□ -1.33
TMEM116-215ENST00000552374 C1orf137Q5JT78 98 aa6.74□□□□□ -1.33
TMEM116-215ENST00000552374 Q8IZM0 81 aa6.74□□□□□ -1.33
TMEM116-215ENST00000552374 SVBPQ8N300 66 aa6.74□□□□□ -1.33
TMEM116-215ENST00000552374 TNXBP22105 4242 aa6.73□□□□□ -1.33
TMEM116-215ENST00000552374 TINCRA0A1B0GVN0 87 aa6.73□□□□□ -1.33
TMEM116-215ENST00000552374 LINC00614P0C842 121 aa6.73□□□□□ -1.33
TMEM116-215ENST00000552374 NDUFA6P56556 154 aa6.73□□□□□ -1.33
TMEM116-215ENST00000552374 PMVKQ15126 192 aa6.73□□□□□ -1.33
TMEM116-215ENST00000552374 REG3GQ6UW15 175 aa6.73□□□□□ -1.33
TMEM116-215ENST00000552374 LINC01600Q96MT4 127 aa6.72□□□□□ -1.33
TMEM116-215ENST00000552374 F8VRH5 84 aa6.71□□□□□ -1.34
TMEM116-215ENST00000552374 C9orf129Q5T035 196 aaKnown RBP6.71□□□□□ -1.34
TMEM116-215ENST00000552374 KRTAP7-1Q8IUC3 87 aa6.71□□□□□ -1.34
TMEM116-215ENST00000552374 C18orf32Q8TCD1 76 aa6.71□□□□□ -1.34
TMEM116-215ENST00000552374 PLA2G2DQ9UNK4 145 aa6.71□□□□□ -1.34
TMEM116-215ENST00000552374 SMIM1B2RUZ4 78 aa6.7□□□□□ -1.34
TMEM116-215ENST00000552374 M0QXV9 152 aa6.7□□□□□ -1.34
TMEM116-215ENST00000552374 SPINK8P0C7L1 97 aa6.7□□□□□ -1.34
TMEM116-215ENST00000552374 UBE2BP63146 152 aa6.7□□□□□ -1.34
TMEM116-215ENST00000552374 PMCHL1Q16048 86 aa6.7□□□□□ -1.34
TMEM116-215ENST00000552374 PDZD11Q5EBL8 140 aa6.7□□□□□ -1.34
TMEM116-215ENST00000552374 KRTAP11-1Q8IUC1 163 aa6.7□□□□□ -1.34
TMEM116-215ENST00000552374 COX7B2Q8TF08 81 aa6.7□□□□□ -1.34
TMEM116-215ENST00000552374 XAGE1AQ9HD64 81 aa6.7□□□□□ -1.34
TMEM116-215ENST00000552374 RAB5BP61020 215 aa6.69□□□□□ -1.34
TMEM116-215ENST00000552374 URB1-AS1Q96HZ7 61 aa6.69□□□□□ -1.34
TMEM116-215ENST00000552374 KRTAP3-3Q9BYR6 98 aa6.69□□□□□ -1.34
TMEM116-215ENST00000552374 KRTAP3-2Q9BYR7 98 aa6.69□□□□□ -1.34
TMEM116-215ENST00000552374 HMCN2Q8NDA2 5059 aa6.69□□□□□ -1.34
TMEM116-215ENST00000552374 A0A096LNJ9 63 aa6.68□□□□□ -1.34
TMEM116-215ENST00000552374 H3BRM9 83 aa6.68□□□□□ -1.34
TMEM116-215ENST00000552374 HBDP02042 147 aa6.68□□□□□ -1.34
TMEM116-215ENST00000552374 IGLV7-43P04211 117 aa6.68□□□□□ -1.34
TMEM116-215ENST00000552374 CXCL5P42830 114 aa6.68□□□□□ -1.34
TMEM116-215ENST00000552374 IGLV5-45A0A087WSX0 123 aa6.67□□□□□ -1.34
TMEM116-215ENST00000552374 ODF1Q14990 250 aa6.67□□□□□ -1.34
TMEM116-215ENST00000552374 KRTAP10-8P60410 259 aa6.67□□□□□ -1.34
TMEM116-215ENST00000552374 BAGE3Q86Y29 109 aa6.67□□□□□ -1.34
TMEM116-215ENST00000552374 C22orf24Q9Y442 160 aa6.67□□□□□ -1.34
TMEM116-215ENST00000552374 ATP5LO75964 103 aa6.66□□□□□ -1.34
TMEM116-215ENST00000552374 IGLC3P0DOY3 106 aa6.66□□□□□ -1.34
TMEM116-215ENST00000552374 DIRC1Q969H9 104 aa6.66□□□□□ -1.34
TMEM116-215ENST00000552374 YPEL4Q96NS1 127 aa6.66□□□□□ -1.34
TMEM116-215ENST00000552374 LBHQ53QV2 105 aaPredicted RBP6.65□□□□□ -1.35
TMEM116-215ENST00000552374 TMEM238LA0A1B0GVL6 79 aa6.64□□□□□ -1.35
TMEM116-215ENST00000552374 ZNF22P17026 224 aaPredicted RBP6.64□□□□□ -1.35
TMEM116-215ENST00000552374 CBLN2Q8IUK8 224 aa6.64□□□□□ -1.35
TMEM116-215ENST00000552374 SLC7A5P1Q8MH63 180 aa6.64□□□□□ -1.35
TMEM116-215ENST00000552374 A6NJY4 79 aa6.63□□□□□ -1.35
TMEM116-215ENST00000552374 PFN2P35080 140 aa6.63□□□□□ -1.35
TMEM116-215ENST00000552374 TMEM170BQ5T4T1 132 aa6.63□□□□□ -1.35
TMEM116-215ENST00000552374 IGLV5-39A0A0G2JS06 123 aa6.62□□□□□ -1.35
TMEM116-215ENST00000552374 C11orf86A6NJI1 115 aa6.62□□□□□ -1.35
TMEM116-215ENST00000552374 MRPL55Q7Z7F7 128 aaKnown RBP6.62□□□□□ -1.35
TMEM116-215ENST00000552374 CHCHD1Q96BP2 118 aaKnown RBP6.62□□□□□ -1.35
TMEM116-215ENST00000552374 CHTOPQ9Y3Y2 248 aaKnown RBP6.62□□□□□ -1.35
TMEM116-215ENST00000552374 GAGE10A6NGK3 116 aa6.61□□□□□ -1.35
TMEM116-215ENST00000552374 RPL37AP8A6NKH3 93 aa6.61□□□□□ -1.35
TMEM116-215ENST00000552374 H0Y9J4 135 aa6.61□□□□□ -1.35
TMEM116-215ENST00000552374 ZNF625Q96I27 306 aaPredicted RBP6.61□□□□□ -1.35
TMEM116-215ENST00000552374 TRGC2P03986 189 aa6.6□□□□□ -1.35
TMEM116-215ENST00000552374 FAM19A2Q8N3H0 131 aa6.6□□□□□ -1.35
TMEM116-215ENST00000552374 PRR26Q8N8Z3 221 aa6.6□□□□□ -1.35
TMEM116-215ENST00000552374 IFI27L1Q96BM0 104 aa6.6□□□□□ -1.35
TMEM116-215ENST00000552374 LINC00167Q96N53 147 aa6.6□□□□□ -1.35
TMEM116-215ENST00000552374 TP73-AS1Q9UF72 201 aa6.6□□□□□ -1.35
TMEM116-215ENST00000552374 NUPR1O60356 82 aa6.59□□□□□ -1.35
TMEM116-215ENST00000552374 ZNF861PO60384 105 aa6.59□□□□□ -1.35
TMEM116-215ENST00000552374 HSBP1O75506 76 aa6.59□□□□□ -1.35
TMEM116-215ENST00000552374 NKAPP1Q8N9T2 125 aa6.59□□□□□ -1.35
TMEM116-215ENST00000552374 H0Y8G0 127 aa6.58□□□□□ -1.36
TMEM116-215ENST00000552374 SCO1O75880 301 aa6.58□□□□□ -1.36
TMEM116-215ENST00000552374 ERG28Q9UKR5 140 aa6.58□□□□□ -1.36
TMEM116-215ENST00000552374 UBR4Q5T4S7 5183 aa6.57□□□□□ -1.36
TMEM116-215ENST00000552374 TRAV12-1A0A0B4J245 112 aa6.57□□□□□ -1.36
TMEM116-215ENST00000552374 BCE1O60756 84 aa6.57□□□□□ -1.36
TMEM116-215ENST00000552374 SND1-IT1Q9HBX3 110 aa6.57□□□□□ -1.36
TMEM116-215ENST00000552374 IGLV5-37A0A075B6J1 123 aa6.56□□□□□ -1.36
TMEM116-215ENST00000552374 A0A0U1RRA0 63 aa6.56□□□□□ -1.36
TMEM116-215ENST00000552374 TMEM223A0PJW6 202 aa6.56□□□□□ -1.36
TMEM116-215ENST00000552374 KRTAP1-4P0C5Y4 121 aa6.56□□□□□ -1.36
TMEM116-215ENST00000552374 RPL28P46779 137 aaKnown RBP6.56□□□□□ -1.36
TMEM116-215ENST00000552374 LINC00158P58513 81 aa6.56□□□□□ -1.36
TMEM116-215ENST00000552374 COX17Q14061 63 aa6.56□□□□□ -1.36
TMEM116-215ENST00000552374 IGLV1-50A0A075B6I6 118 aa6.55□□□□□ -1.36
TMEM116-215ENST00000552374 IGKV2-28A0A075B6P5 120 aa6.55□□□□□ -1.36
TMEM116-215ENST00000552374 SERF1AO75920 110 aa6.55□□□□□ -1.36
TMEM116-215ENST00000552374 IGKV2D-28P01615 120 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms