RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 F8W1H4 67 aa10.63□□□□□ -0.71
SCN8A-206ENST00000550891 COX6CP09669 75 aa10.63□□□□□ -0.71
SCN8A-206ENST00000550891 PFN2P35080 140 aa10.62□□□□□ -0.71
SCN8A-206ENST00000550891 Q8IZM0 81 aa10.62□□□□□ -0.71
SCN8A-206ENST00000550891 MIR7-3HGQ8N6C7 128 aa10.62□□□□□ -0.71
SCN8A-206ENST00000550891 IBA57-AS1B1ANH7 110 aa10.62□□□□□ -0.71
SCN8A-206ENST00000550891 K7EIL1 84 aa10.62□□□□□ -0.71
SCN8A-206ENST00000550891 UBE2WQ96B02 151 aa10.62□□□□□ -0.71
SCN8A-206ENST00000550891 RPL13AP40429 203 aaKnown RBP10.61□□□□□ -0.71
SCN8A-206ENST00000550891 K7ERU9 68 aa10.6□□□□□ -0.71
SCN8A-206ENST00000550891 EIF4EBP3O60516 100 aaPredicted RBP10.6□□□□□ -0.71
SCN8A-206ENST00000550891 GAGE12HA6NDE8 117 aa10.6□□□□□ -0.71
SCN8A-206ENST00000550891 CXCL5P42830 114 aa10.59□□□□□ -0.71
SCN8A-206ENST00000550891 MTURNQ8N3F0 131 aa10.59□□□□□ -0.71
SCN8A-206ENST00000550891 MGAM2Q2M2H8 2515 aa10.59□□□□□ -0.71
SCN8A-206ENST00000550891 OCIAD2Q56VL3 154 aa10.59□□□□□ -0.71
SCN8A-206ENST00000550891 TRAV10A0A0B4J240 114 aa10.59□□□□□ -0.71
SCN8A-206ENST00000550891 WFDC10BQ8IUB3 73 aa10.59□□□□□ -0.71
SCN8A-206ENST00000550891 TM2D3Q9BRN9 247 aa10.59□□□□□ -0.71
SCN8A-206ENST00000550891 TCL1BO95988 128 aa10.58□□□□□ -0.72
SCN8A-206ENST00000550891 C2orf82Q6UX34 121 aa10.57□□□□□ -0.72
SCN8A-206ENST00000550891 SOSTDC1Q6X4U4 206 aa10.57□□□□□ -0.72
SCN8A-206ENST00000550891 PRR34Q9NV39 138 aa10.57□□□□□ -0.72
SCN8A-206ENST00000550891 TRAV8-4A0A0B4J246 113 aa10.57□□□□□ -0.72
SCN8A-206ENST00000550891 TRBV30A0A0K0K1B3 111 aa10.57□□□□□ -0.72
SCN8A-206ENST00000550891 SND1-IT1Q9HBX3 110 aa10.57□□□□□ -0.72
SCN8A-206ENST00000550891 WFDC2Q14508 124 aa10.57□□□□□ -0.72
SCN8A-206ENST00000550891 ESRGQ1W209 222 aa10.57□□□□□ -0.72
SCN8A-206ENST00000550891 TRIAP1O43715 76 aa10.56□□□□□ -0.72
SCN8A-206ENST00000550891 FOXI1Q12951 378 aa10.56□□□□□ -0.72
SCN8A-206ENST00000550891 MDFIQ99750 246 aa10.56□□□□□ -0.72
SCN8A-206ENST00000550891 ATXN8Q156A1 80 aa10.56□□□□□ -0.72
SCN8A-206ENST00000550891 SPAG11BQ08648 103 aa10.55□□□□□ -0.72
SCN8A-206ENST00000550891 RNF151Q2KHN1 245 aa10.55□□□□□ -0.72
SCN8A-206ENST00000550891 NBEAL1Q6ZS30 2694 aa10.55□□□□□ -0.72
SCN8A-206ENST00000550891 ENHOQ6UWT2 76 aa10.55□□□□□ -0.72
SCN8A-206ENST00000550891 PPDPFQ9H3Y8 114 aa10.55□□□□□ -0.72
SCN8A-206ENST00000550891 TRAV13-2A0A0B4J235 113 aa10.54□□□□□ -0.72
SCN8A-206ENST00000550891 C15orf53Q8NAA6 179 aa10.54□□□□□ -0.72
SCN8A-206ENST00000550891 TENM3Q9P273 2699 aa10.54□□□□□ -0.72
SCN8A-206ENST00000550891 ETDBQ3ZM63 59 aa10.53□□□□□ -0.72
SCN8A-206ENST00000550891 J3QR89 54 aa10.52□□□□□ -0.73
SCN8A-206ENST00000550891 KLK5Q9Y337 293 aaPredicted RBP10.52□□□□□ -0.73
SCN8A-206ENST00000550891 CCL18P55774 89 aa10.52□□□□□ -0.73
SCN8A-206ENST00000550891 C9JAW5 83 aa10.51□□□□□ -0.73
SCN8A-206ENST00000550891 KIAA0087Q14695 138 aa10.51□□□□□ -0.73
SCN8A-206ENST00000550891 C1orf43Q9BWL3 253 aa10.51□□□□□ -0.73
SCN8A-206ENST00000550891 COX17Q14061 63 aa10.5□□□□□ -0.73
SCN8A-206ENST00000550891 PRO0461Q9UI25 63 aa10.5□□□□□ -0.73
SCN8A-206ENST00000550891 LINC01556Q5JQF7 62 aa10.5□□□□□ -0.73
SCN8A-206ENST00000550891 VPS25Q9BRG1 176 aa10.5□□□□□ -0.73
SCN8A-206ENST00000550891 OR13C6PQ8NH95 151 aa10.49□□□□□ -0.73
SCN8A-206ENST00000550891 ZNF561-AS1K7EIQ3 104 aa10.48□□□□□ -0.73
SCN8A-206ENST00000550891 SLC25A20O43772 301 aa10.48□□□□□ -0.73
SCN8A-206ENST00000550891 LINC01620Q4KN68 170 aa10.48□□□□□ -0.73
SCN8A-206ENST00000550891 LINC00526Q96FQ7 95 aa10.48□□□□□ -0.73
SCN8A-206ENST00000550891 IGKV2D-24A0A075B6R9 120 aa10.47□□□□□ -0.73
SCN8A-206ENST00000550891 CLEC2BQ92478 149 aa10.47□□□□□ -0.73
SCN8A-206ENST00000550891 UNQ6190/PRO20217Q6UXQ8 127 aa10.46□□□□□ -0.73
SCN8A-206ENST00000550891 C6orf223Q8N319 242 aa10.46□□□□□ -0.73
SCN8A-206ENST00000550891 C9orf116Q5BN46 136 aaPredicted RBP10.46□□□□□ -0.74
SCN8A-206ENST00000550891 Q9HAA7 133 aa10.45□□□□□ -0.74
SCN8A-206ENST00000550891 LINC00337Q8N6G1 96 aa10.45□□□□□ -0.74
SCN8A-206ENST00000550891 IGKV2-28A0A075B6P5 120 aa10.44□□□□□ -0.74
SCN8A-206ENST00000550891 IGKV2D-28P01615 120 aa10.44□□□□□ -0.74
SCN8A-206ENST00000550891 SMCPP49901 116 aaPredicted RBP10.44□□□□□ -0.74
SCN8A-206ENST00000550891 HIGD2BQ4VC39 106 aa10.44□□□□□ -0.74
SCN8A-206ENST00000550891 CAMK2N2Q96S95 79 aa10.43□□□□□ -0.74
SCN8A-206ENST00000550891 LST1O00453 97 aa10.43□□□□□ -0.74
SCN8A-206ENST00000550891 DNAH10OSP0CZ25 163 aa10.43□□□□□ -0.74
SCN8A-206ENST00000550891 TEN1Q86WV5 123 aa10.43□□□□□ -0.74
SCN8A-206ENST00000550891 ANKRD29Q8N6D5 301 aa10.43□□□□□ -0.74
SCN8A-206ENST00000550891 MUC7Q8TAX7 377 aa10.43□□□□□ -0.74
SCN8A-206ENST00000550891 C10orf25Q5T742 122 aa10.42□□□□□ -0.74
SCN8A-206ENST00000550891 LINC00588Q9Y4M8 146 aa10.42□□□□□ -0.74
SCN8A-206ENST00000550891 TRBV10-2A0A0K0K1G8 114 aa10.42□□□□□ -0.74
SCN8A-206ENST00000550891 CBY1Q9Y3M2 126 aa10.41□□□□□ -0.74
SCN8A-206ENST00000550891 NTN5Q8WTR8 489 aaPredicted RBP10.41□□□□□ -0.74
SCN8A-206ENST00000550891 RPL28P46779 137 aaKnown RBP10.41□□□□□ -0.74
SCN8A-206ENST00000550891 B9D2Q9BPU9 175 aa10.4□□□□□ -0.74
SCN8A-206ENST00000550891 CMYA5Q8N3K9 4069 aa10.4□□□□□ -0.75
SCN8A-206ENST00000550891 SMIM11BQ8TCY0 68 aa10.39□□□□□ -0.75
SCN8A-206ENST00000550891 PPDPFLQ8WWR9 84 aa10.39□□□□□ -0.75
SCN8A-206ENST00000550891 NDUFC2O95298 119 aa10.39□□□□□ -0.75
SCN8A-206ENST00000550891 CARD19Q96LW7 228 aa10.39□□□□□ -0.75
SCN8A-206ENST00000550891 ANK2Q01484 3957 aa10.39□□□□□ -0.75
SCN8A-206ENST00000550891 RMI2Q96E14 147 aa10.38□□□□□ -0.75
SCN8A-206ENST00000550891 GVQW2A0A096LPI5 108 aaPredicted RBP10.38□□□□□ -0.75
SCN8A-206ENST00000550891 H3BT86 120 aa10.38□□□□□ -0.75
SCN8A-206ENST00000550891 S100A7L2Q5SY68 101 aa10.38□□□□□ -0.75
SCN8A-206ENST00000550891 M0QXV9 152 aa10.37□□□□□ -0.75
SCN8A-206ENST00000550891 DNAL4O96015 105 aa10.37□□□□□ -0.75
SCN8A-206ENST00000550891 TMEM126AQ9H061 195 aa10.37□□□□□ -0.75
SCN8A-206ENST00000550891 C6orf48Q9UBA6 75 aa10.37□□□□□ -0.75
SCN8A-206ENST00000550891 H0YGX0 51 aa10.36□□□□□ -0.75
SCN8A-206ENST00000550891 PRR3P79522 188 aaKnown RBP10.36□□□□□ -0.75
SCN8A-206ENST00000550891 KRTAP26-1Q6PEX3 210 aa10.36□□□□□ -0.75
SCN8A-206ENST00000550891 UBE2DNLQ8IWF7 75 aa10.36□□□□□ -0.75
SCN8A-206ENST00000550891 NCR3O14931 201 aa10.35□□□□□ -0.75
SCN8A-206ENST00000550891 C2orf48Q96LS8 159 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms