RNA–Protein interactions for RNA: ENST00000550798.1

PPFIA2-221, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-221ENST00000550798 ALKBH7Q9BT30 221 aaPredicted RBP7.04□□□□□ -1.28
PPFIA2-221ENST00000550798 NXT2Q9NPJ8 142 aaKnown RBP7.04□□□□□ -1.28
PPFIA2-221ENST00000550798 IGIPA6NJ69 53 aa7.03□□□□□ -1.28
PPFIA2-221ENST00000550798 NUPR1O60356 82 aa7.03□□□□□ -1.28
PPFIA2-221ENST00000550798 LBHQ53QV2 105 aaPredicted RBP7.03□□□□□ -1.28
PPFIA2-221ENST00000550798 RNF213Q63HN8 5207 aa7.03□□□□□ -1.28
PPFIA2-221ENST00000550798 LPAP08519 4548 aa7.03□□□□□ -1.28
PPFIA2-221ENST00000550798 ZNF861PO60384 105 aa7.02□□□□□ -1.29
PPFIA2-221ENST00000550798 LINC00469Q8N7U9 141 aa7.02□□□□□ -1.29
PPFIA2-221ENST00000550798 CTDSP1Q9GZU7 261 aa7.02□□□□□ -1.29
PPFIA2-221ENST00000550798 GEMIN7Q9H840 131 aaKnown RBP7.02□□□□□ -1.29
PPFIA2-221ENST00000550798 CARHSP1Q9Y2V2 147 aaKnown RBP7.02□□□□□ -1.29
PPFIA2-221ENST00000550798 C22orf24Q9Y442 160 aa7.02□□□□□ -1.29
PPFIA2-221ENST00000550798 F8VRH5 84 aa7.01□□□□□ -1.29
PPFIA2-221ENST00000550798 CXCL5P42830 114 aa7.01□□□□□ -1.29
PPFIA2-221ENST00000550798 RAB14P61106 215 aa7.01□□□□□ -1.29
PPFIA2-221ENST00000550798 TIMM17AQ99595 171 aa7.01□□□□□ -1.29
PPFIA2-221ENST00000550798 XAGE1AQ9HD64 81 aa7.01□□□□□ -1.29
PPFIA2-221ENST00000550798 CDKN2A-AS1Q9UH64 79 aa7.01□□□□□ -1.29
PPFIA2-221ENST00000550798 TOMM6Q96B49 74 aa7□□□□□ -1.29
PPFIA2-221ENST00000550798 TP73-AS1Q9UF72 201 aa6.99□□□□□ -1.29
PPFIA2-221ENST00000550798 PRR4Q16378 134 aa6.98□□□□□ -1.29
PPFIA2-221ENST00000550798 ERASQ7Z444 233 aa6.98□□□□□ -1.29
PPFIA2-221ENST00000550798 MRPL55Q7Z7F7 128 aaKnown RBP6.98□□□□□ -1.29
PPFIA2-221ENST00000550798 SCGB3A1Q96QR1 104 aa6.98□□□□□ -1.29
PPFIA2-221ENST00000550798 LINC01549A6NIU2 74 aa6.97□□□□□ -1.29
PPFIA2-221ENST00000550798 RPL28P46779 137 aaKnown RBP6.97□□□□□ -1.29
PPFIA2-221ENST00000550798 PDZD11Q5EBL8 140 aa6.97□□□□□ -1.29
PPFIA2-221ENST00000550798 TINCRA0A1B0GVN0 87 aa6.96□□□□□ -1.3
PPFIA2-221ENST00000550798 SMIM1B2RUZ4 78 aa6.96□□□□□ -1.3
PPFIA2-221ENST00000550798 BCE1O60756 84 aa6.96□□□□□ -1.3
PPFIA2-221ENST00000550798 KIAA1644Q3SXP7 199 aa6.96□□□□□ -1.3
PPFIA2-221ENST00000550798 LCE2AQ5TA79 106 aaPredicted RBP6.96□□□□□ -1.3
PPFIA2-221ENST00000550798 COX7B2Q8TF08 81 aa6.96□□□□□ -1.3
PPFIA2-221ENST00000550798 TRAV9-1A0A075B6T8 112 aa6.95□□□□□ -1.3
PPFIA2-221ENST00000550798 IGLV5-45A0A087WSX0 123 aa6.94□□□□□ -1.3
PPFIA2-221ENST00000550798 LINC00167Q96N53 147 aa6.94□□□□□ -1.3
PPFIA2-221ENST00000550798 RPL37AP8A6NKH3 93 aa6.93□□□□□ -1.3
PPFIA2-221ENST00000550798 CRYGAP11844 174 aa6.93□□□□□ -1.3
PPFIA2-221ENST00000550798 ADCYAP1P18509 176 aa6.93□□□□□ -1.3
PPFIA2-221ENST00000550798 CLLU1Q5K131 121 aa6.93□□□□□ -1.3
PPFIA2-221ENST00000550798 LINC01546A6NGU7 62 aa6.92□□□□□ -1.3
PPFIA2-221ENST00000550798 TSPAN13O95857 204 aa6.92□□□□□ -1.3
PPFIA2-221ENST00000550798 SPINK8P0C7L1 97 aa6.92□□□□□ -1.3
PPFIA2-221ENST00000550798 S100PP25815 95 aa6.92□□□□□ -1.3
PPFIA2-221ENST00000550798 RAB5BP61020 215 aa6.92□□□□□ -1.3
PPFIA2-221ENST00000550798 PMVKQ15126 192 aa6.92□□□□□ -1.3
PPFIA2-221ENST00000550798 NKAPP1Q8N9T2 125 aa6.92□□□□□ -1.3
PPFIA2-221ENST00000550798 TYMSOSQ8TAI1 123 aa6.92□□□□□ -1.3
PPFIA2-221ENST00000550798 GNB1LQ9BYB4 327 aa6.92□□□□□ -1.3
PPFIA2-221ENST00000550798 MRPL18Q9H0U6 180 aaKnown RBP6.92□□□□□ -1.3
PPFIA2-221ENST00000550798 CST9LQ9H4G1 147 aa6.92□□□□□ -1.3
PPFIA2-221ENST00000550798 IGLV5-37A0A075B6J1 123 aa6.91□□□□□ -1.3
PPFIA2-221ENST00000550798 A0A087X002 238 aa6.91□□□□□ -1.3
PPFIA2-221ENST00000550798 GAGE10A6NGK3 116 aa6.91□□□□□ -1.3
PPFIA2-221ENST00000550798 H3BRM9 83 aa6.91□□□□□ -1.3
PPFIA2-221ENST00000550798 COX19Q49B96 90 aa6.91□□□□□ -1.3
PPFIA2-221ENST00000550798 UQCC3Q6UW78 93 aa6.91□□□□□ -1.3
PPFIA2-221ENST00000550798 SMCO4Q9NRQ5 59 aa6.91□□□□□ -1.3
PPFIA2-221ENST00000550798 TMEM218A2RU14 115 aa6.9□□□□□ -1.3
PPFIA2-221ENST00000550798 ATP5LO75964 103 aa6.9□□□□□ -1.3
PPFIA2-221ENST00000550798 UBE2AP49459 152 aa6.9□□□□□ -1.3
PPFIA2-221ENST00000550798 FA2HQ7L5A8 372 aa6.9□□□□□ -1.3
PPFIA2-221ENST00000550798 SEC11CQ9BY50 192 aa6.88□□□□□ -1.31
PPFIA2-221ENST00000550798 IGKV2-28A0A075B6P5 120 aa6.87□□□□□ -1.31
PPFIA2-221ENST00000550798 A0A0U1RQV1 116 aa6.87□□□□□ -1.31
PPFIA2-221ENST00000550798 IGKV2D-28P01615 120 aa6.87□□□□□ -1.31
PPFIA2-221ENST00000550798 IGLC3P0DOY3 106 aa6.87□□□□□ -1.31
PPFIA2-221ENST00000550798 FABP9Q0Z7S8 132 aa6.87□□□□□ -1.31
PPFIA2-221ENST00000550798 FAM229BQ4G0N7 80 aa6.87□□□□□ -1.31
PPFIA2-221ENST00000550798 KRTAP13-1Q8IUC0 172 aa6.87□□□□□ -1.31
PPFIA2-221ENST00000550798 PFN2P35080 140 aa6.86□□□□□ -1.31
PPFIA2-221ENST00000550798 ANAPC11Q9NYG5 84 aa6.86□□□□□ -1.31
PPFIA2-221ENST00000550798 IGLV5-39A0A0G2JS06 123 aa6.85□□□□□ -1.31
PPFIA2-221ENST00000550798 NDUFA6P56556 154 aa6.85□□□□□ -1.31
PPFIA2-221ENST00000550798 RPL24P83731 157 aaKnown RBP6.85□□□□□ -1.31
PPFIA2-221ENST00000550798 SCO1O75880 301 aa6.84□□□□□ -1.31
PPFIA2-221ENST00000550798 COX17Q14061 63 aa6.84□□□□□ -1.31
PPFIA2-221ENST00000550798 KRTAP13-2Q52LG2 175 aa6.84□□□□□ -1.31
PPFIA2-221ENST00000550798 FAM19A1Q7Z5A9 133 aa6.84□□□□□ -1.31
PPFIA2-221ENST00000550798 LINC00304Q8N9R0 145 aa6.84□□□□□ -1.31
PPFIA2-221ENST00000550798 ERG28Q9UKR5 140 aa6.84□□□□□ -1.31
PPFIA2-221ENST00000550798 IGKV2D-26A0A0A0MRZ7 120 aa6.83□□□□□ -1.32
PPFIA2-221ENST00000550798 VPREB1P12018 145 aa6.83□□□□□ -1.32
PPFIA2-221ENST00000550798 ZNF22P17026 224 aaPredicted RBP6.83□□□□□ -1.32
PPFIA2-221ENST00000550798 PRLHP81277 87 aa6.83□□□□□ -1.32
PPFIA2-221ENST00000550798 LCE2CQ5TA81 110 aa6.83□□□□□ -1.32
PPFIA2-221ENST00000550798 SFTA2Q6UW10 78 aa6.83□□□□□ -1.32
PPFIA2-221ENST00000550798 TMEM126AQ9H061 195 aa6.83□□□□□ -1.32
PPFIA2-221ENST00000550798 SND1-IT1Q9HBX3 110 aa6.83□□□□□ -1.32
PPFIA2-221ENST00000550798 HBDP02042 147 aa6.82□□□□□ -1.32
PPFIA2-221ENST00000550798 LINC00614P0C842 121 aa6.82□□□□□ -1.32
PPFIA2-221ENST00000550798 RHEBQ15382 184 aa6.82□□□□□ -1.32
PPFIA2-221ENST00000550798 RPS10P5Q9NQ39 176 aa6.82□□□□□ -1.32
PPFIA2-221ENST00000550798 A0A096LNJ9 63 aa6.81□□□□□ -1.32
PPFIA2-221ENST00000550798 TMEM238C9JI98 176 aa6.81□□□□□ -1.32
PPFIA2-221ENST00000550798 CTAG1AP78358 180 aa6.81□□□□□ -1.32
PPFIA2-221ENST00000550798 ZNF625Q96I27 306 aaPredicted RBP6.81□□□□□ -1.32
PPFIA2-221ENST00000550798 TRAPPC1Q9Y5R8 145 aa6.81□□□□□ -1.32
PPFIA2-221ENST00000550798 IFITM2Q01629 132 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms