RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 PPDPFQ9H3Y8 114 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 SMDT1Q9H4I9 107 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 OTORQ9NRC9 128 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 KCNIP2Q9NS61 270 aa2.19□□□□□ -2.06
LIMA1-206ENST00000550611 A0A1B0GX51 115 aa2.18□□□□□ -2.06
LIMA1-206ENST00000550611 A8MWV9 139 aa2.18□□□□□ -2.06
LIMA1-206ENST00000550611 BCL2L11O43521 198 aa2.18□□□□□ -2.06
LIMA1-206ENST00000550611 SPINK8P0C7L1 97 aa2.18□□□□□ -2.06
LIMA1-206ENST00000550611 RPL13AP40429 203 aaKnown RBP2.18□□□□□ -2.06
LIMA1-206ENST00000550611 UBE2D3P61077 147 aa2.18□□□□□ -2.06
LIMA1-206ENST00000550611 UBE2D2P62837 147 aa2.18□□□□□ -2.06
LIMA1-206ENST00000550611 GNG5P63218 68 aa2.18□□□□□ -2.06
LIMA1-206ENST00000550611 HBG1P69891 147 aa2.18□□□□□ -2.06
LIMA1-206ENST00000550611 HBG2P69892 147 aa2.18□□□□□ -2.06
LIMA1-206ENST00000550611 C1orf195Q5TG92 126 aa2.18□□□□□ -2.06
LIMA1-206ENST00000550611 MRPL54Q6P161 138 aaKnown RBP2.18□□□□□ -2.06
LIMA1-206ENST00000550611 GOLT1AQ6ZVE7 132 aa2.18□□□□□ -2.06
LIMA1-206ENST00000550611 TMEM75Q8N9X5 138 aa2.18□□□□□ -2.06
LIMA1-206ENST00000550611 SPACA4Q8TDM5 124 aa2.18□□□□□ -2.06
LIMA1-206ENST00000550611 WDR61Q9GZS3 305 aaKnown RBP2.18□□□□□ -2.06
LIMA1-206ENST00000550611 PRO0461Q9UI25 63 aa2.18□□□□□ -2.06
LIMA1-206ENST00000550611 KIF25-AS1Q9Y6Z4 181 aa2.18□□□□□ -2.06
LIMA1-206ENST00000550611 SSPOA2VEC9 5147 aa2.18□□□□□ -2.06
LIMA1-206ENST00000550611 MUC17Q685J3 4493 aa2.18□□□□□ -2.06
LIMA1-206ENST00000550611 USH2AO75445 5202 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 TRBV6-8A0A0A6YYG3 113 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 TRBV10-1A0A0K0K1A3 114 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 C9JAW5 83 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 TMEM262E9PQX1 116 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 NDUFC2O95298 119 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 TRGC2P03986 189 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 KRTAP1-4P0C5Y4 121 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 CHTF8P0CG12 524 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 ADCYAP1P18509 176 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 HINT1P49773 126 aaPredicted RBP2.17□□□□□ -2.06
LIMA1-206ENST00000550611 UBE2L3P68036 154 aaKnown RBP2.17□□□□□ -2.06
LIMA1-206ENST00000550611 PRR3P79522 188 aaKnown RBP2.17□□□□□ -2.06
LIMA1-206ENST00000550611 ZNF345Q14585 488 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 MIAQ16674 131 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 MPV17L2Q567V2 206 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 MEIG1Q5JSS6 88 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 RASL11AQ6T310 242 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 SPINK6Q6UWN8 80 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 TEX43Q6ZNM6 134 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 NTM-AS1Q6ZSK4 140 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 OR5C1Q8NGR4 320 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 CMTM2Q8TAZ6 248 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 BORCS7Q96B45 105 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 NMES1Q9C002 83 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 IL36BQ9NZH7 164 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 MUC19Q7Z5P9 8384 aa2.17□□□□□ -2.06
LIMA1-206ENST00000550611 FCGBPQ9Y6R7 5405 aaPredicted RBP2.17□□□□□ -2.06
LIMA1-206ENST00000550611 TRBV7-3A0A075B6L6 115 aa2.16□□□□□ -2.06
LIMA1-206ENST00000550611 IGHV3-64A0A075B6Q5 118 aa2.16□□□□□ -2.06
LIMA1-206ENST00000550611 MUC21A0A0G2JKD1 596 aa2.16□□□□□ -2.06
LIMA1-206ENST00000550611 A0A1B0GV50 99 aa2.16□□□□□ -2.06
LIMA1-206ENST00000550611 UMAD1C9J7I0 102 aa2.16□□□□□ -2.06
LIMA1-206ENST00000550611 F8W1H4 67 aa2.16□□□□□ -2.06
LIMA1-206ENST00000550611 ATP5LO75964 103 aa2.16□□□□□ -2.06
LIMA1-206ENST00000550611 HLA-DQA1P01909 254 aa2.16□□□□□ -2.06
LIMA1-206ENST00000550611 ANGP03950 147 aaKnown RBP2.16□□□□□ -2.06
LIMA1-206ENST00000550611 TCRAP04437 139 aa2.16□□□□□ -2.06
LIMA1-206ENST00000550611 ARMS2P0C7Q2 107 aa2.16□□□□□ -2.06
LIMA1-206ENST00000550611 IFITM1P13164 125 aa2.16□□□□□ -2.06
LIMA1-206ENST00000550611 CRIP1P50238 77 aa2.16□□□□□ -2.06
LIMA1-206ENST00000550611 TAS2R45P59539 299 aa2.16□□□□□ -2.06
LIMA1-206ENST00000550611 PMCHL1Q16048 86 aa2.16□□□□□ -2.06
LIMA1-206ENST00000550611 SPATA45Q537H7 98 aa2.16□□□□□ -2.06
LIMA1-206ENST00000550611 FAM19A5Q7Z5A7 132 aaPredicted RBP2.16□□□□□ -2.06
LIMA1-206ENST00000550611 C7orf33Q8WU49 177 aa2.16□□□□□ -2.06
LIMA1-206ENST00000550611 DPH3Q96FX2 82 aa2.16□□□□□ -2.06
LIMA1-206ENST00000550611 TMEM101Q96IK0 257 aa2.16□□□□□ -2.06
LIMA1-206ENST00000550611 EIF5A2Q9GZV4 153 aaKnown RBP2.16□□□□□ -2.06
LIMA1-206ENST00000550611 DPH3P1Q9H4G8 78 aa2.16□□□□□ -2.06
LIMA1-206ENST00000550611 TMEM242Q9NWH2 141 aa2.16□□□□□ -2.06
LIMA1-206ENST00000550611 TRBV24-1A0A075B6N3 115 aa2.15□□□□□ -2.07
LIMA1-206ENST00000550611 C17orf112F2Z3M2 114 aa2.15□□□□□ -2.07
LIMA1-206ENST00000550611 TMEM250H0YL14 139 aa2.15□□□□□ -2.07
LIMA1-206ENST00000550611 K7EP34 96 aa2.15□□□□□ -2.07
LIMA1-206ENST00000550611 CRPP02741 224 aa2.15□□□□□ -2.07
LIMA1-206ENST00000550611 IGLC3P0DOY3 106 aa2.15□□□□□ -2.07
LIMA1-206ENST00000550611 FABP2P12104 132 aa2.15□□□□□ -2.07
LIMA1-206ENST00000550611 S100A4P26447 101 aaKnown RBP2.15□□□□□ -2.07
LIMA1-206ENST00000550611 SEC11AP67812 179 aa2.15□□□□□ -2.07
LIMA1-206ENST00000550611 LYRM7Q5U5X0 104 aa2.15□□□□□ -2.07
LIMA1-206ENST00000550611 FAM231DQ6ZW35 169 aa2.15□□□□□ -2.07
LIMA1-206ENST00000550611 LINC00269Q8N2A0 174 aa2.15□□□□□ -2.07
LIMA1-206ENST00000550611 GATD1Q8NB37 220 aa2.15□□□□□ -2.07
LIMA1-206ENST00000550611 TYMSOSQ8TAI1 123 aa2.15□□□□□ -2.07
LIMA1-206ENST00000550611 SCGB1C1Q8TD33 95 aa2.15□□□□□ -2.07
LIMA1-206ENST00000550611 PMCHL2Q9BQD1 86 aa2.15□□□□□ -2.07
LIMA1-206ENST00000550611 ST20Q9HBF5 79 aa2.15□□□□□ -2.07
LIMA1-206ENST00000550611 EPDR1Q9UM22 224 aa2.15□□□□□ -2.07
LIMA1-206ENST00000550611 MACF1Q9UPN3 7388 aaKnown RBP2.14□□□□□ -2.07
LIMA1-206ENST00000550611 IGLV10-54A0A075B6I4 117 aa2.14□□□□□ -2.07
LIMA1-206ENST00000550611 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.14□□□□□ -2.07
LIMA1-206ENST00000550611 TRAV8-4A0A0B4J246 113 aa2.14□□□□□ -2.07
LIMA1-206ENST00000550611 GRIFINA4D1Z8 144 aa2.14□□□□□ -2.07
LIMA1-206ENST00000550611 E9PLD3 99 aa2.14□□□□□ -2.07
LIMA1-206ENST00000550611 H3BRM9 83 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms