RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 Q0VG73 95 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 DEFB114Q30KQ6 69 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 Q56UQ5 140 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 PSMG4Q5JS54 123 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 AMTNQ6UX39 209 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 BPIFA4PQ86YQ2 179 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 OR5C1Q8NGR4 320 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 SMIM4Q8WVI0 70 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 ZNF714Q96N38 554 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 COMMD5Q9GZQ3 224 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 TMEM222Q9H0R3 208 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 MANBALQ9NQG1 85 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 LINC00312Q9Y6C7 94 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 IGKV1D-42A0A075B6H8 117 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 TRBV6-7A0A0A0MS04 114 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 TRAV13-1A0A0B4J241 112 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 TRAV41A0A0B4J266 112 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 TEX50A0A1B0GTY4 177 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 ZNF736B4DX44 427 aaPredicted RBP2.08□□□□□ -2.08
LIMA1-205ENST00000550592 G3V318 75 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 H3BMG7 143 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 PITX3O75364 302 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 SRP19P09132 144 aaKnown RBP2.08□□□□□ -2.08
LIMA1-205ENST00000550592 PPP1CCP36873 323 aaKnown RBP2.08□□□□□ -2.08
LIMA1-205ENST00000550592 LINC00313P59037 77 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 KRTAP12-3P60328 96 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 TMEM258P61165 79 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 SNRPGP62308 76 aaKnown RBP2.08□□□□□ -2.08
LIMA1-205ENST00000550592 SSBP1Q04837 148 aaKnown RBP2.08□□□□□ -2.08
LIMA1-205ENST00000550592 RRN3P1Q2M238 152 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 FAM229BQ4G0N7 80 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 RPS27LQ71UM5 84 aaKnown RBP2.08□□□□□ -2.08
LIMA1-205ENST00000550592 C1orf158Q8N1D5 194 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 NUP35Q8NFH5 326 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 FAM213BQ8TBF2 198 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 PPP1R1CQ8WVI7 109 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 PPDPFLQ8WWR9 84 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 LINC00526Q96FQ7 95 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 ABHD14BQ96IU4 210 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 PRELID3AQ96N28 172 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 NMES1Q9C002 83 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 TVP23BQ9NYZ1 205 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 ARL2-SNX15V9GYD0 113 aa2.08□□□□□ -2.08
LIMA1-205ENST00000550592 TRAV9-1A0A075B6T8 112 aa2.07□□□□□ -2.08
LIMA1-205ENST00000550592 IGKV1D-43A0A0B4J1Z2 117 aa2.07□□□□□ -2.08
LIMA1-205ENST00000550592 TRAV26-2A0A0B4J265 109 aa2.07□□□□□ -2.08
LIMA1-205ENST00000550592 KNCNA6PVL3 124 aa2.07□□□□□ -2.08
LIMA1-205ENST00000550592 ZNF737O75373 536 aa2.07□□□□□ -2.08
LIMA1-205ENST00000550592 PYYP10082 97 aa2.07□□□□□ -2.08
LIMA1-205ENST00000550592 FGF6P10767 208 aa2.07□□□□□ -2.08
LIMA1-205ENST00000550592 FOXA3P55318 350 aaPredicted RBP2.07□□□□□ -2.08
LIMA1-205ENST00000550592 EDDM3BP56851 147 aa2.07□□□□□ -2.08
LIMA1-205ENST00000550592 UBE2G1P62253 170 aa2.07□□□□□ -2.08
LIMA1-205ENST00000550592 VMA21Q3ZAQ7 101 aa2.07□□□□□ -2.08
LIMA1-205ENST00000550592 ETDBQ3ZM63 59 aa2.07□□□□□ -2.08
LIMA1-205ENST00000550592 ATOH7Q8N100 152 aa2.07□□□□□ -2.08
LIMA1-205ENST00000550592 EXOC3-AS1Q8N2X6 119 aa2.07□□□□□ -2.08
LIMA1-205ENST00000550592 AQP3Q92482 292 aa2.07□□□□□ -2.08
LIMA1-205ENST00000550592 BORCS8Q96FH0 119 aa2.07□□□□□ -2.08
LIMA1-205ENST00000550592 DPH3Q96FX2 82 aa2.07□□□□□ -2.08
LIMA1-205ENST00000550592 FAM103A1Q9BTL3 118 aaKnown RBP2.07□□□□□ -2.08
LIMA1-205ENST00000550592 TMEM147Q9BVK8 224 aa2.07□□□□□ -2.08
LIMA1-205ENST00000550592 C11orf1Q9H5F2 150 aa2.07□□□□□ -2.08
LIMA1-205ENST00000550592 LSM2Q9Y333 95 aaKnown RBP2.07□□□□□ -2.08
LIMA1-205ENST00000550592 AMMECR1Q9Y4X0 333 aaPredicted RBP2.07□□□□□ -2.08
LIMA1-205ENST00000550592 PXMP4Q9Y6I8 212 aa2.07□□□□□ -2.08
LIMA1-205ENST00000550592 TRAV27A0A087WT01 109 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 FAM236AA0A1B0GUQ0 79 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 FAM236BA0A1B0GV22 79 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 A0A1B0GWA3 101 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 SYS1-DBNDD2H3BUS1 97 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 J3QQQ9 107 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 HMGN4O00479 90 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 CD3DP04234 171 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 MIFP14174 115 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 WFDC2Q14508 124 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 CDK5R1Q15078 307 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 RTL8BQ17RB0 113 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 C12orf74Q32Q52 190 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 NMSQ5H8A3 153 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 RPL7L1Q6DKI1 246 aaKnown RBP2.06□□□□□ -2.08
LIMA1-205ENST00000550592 TMEM14EPQ6UXP3 125 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 TRAPPC6BQ86SZ2 158 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 OTOSQ8NHW6 89 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 NMNAT3Q96T66 252 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 C20orf78Q9BR46 151 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 RTL8AQ9BWD3 113 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 IMUPQ9GZP8 106 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 PSORS1C2Q9UIG4 136 aa2.06□□□□□ -2.08
LIMA1-205ENST00000550592 TRAV12-2A0A075B6T6 113 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 TRAV2A0A0B4J234 112 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 TRAV1-2A0A0B4J238 106 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 GRIFINA4D1Z8 144 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 A8MWV9 139 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 M0R2P5 195 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 IGHV3-7P01780 117 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 ASAH2BP0C7U1 165 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 C3orf79P0CE67 100 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 CRYGAP11844 174 aa2.05□□□□□ -2.08
LIMA1-205ENST00000550592 CSN1S1P47710 185 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms