RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 RPL28P46779 137 aaKnown RBP13.77□□□□□ -0.21
SMARCD1-209ENST00000550477 ANAPC16Q96DE5 110 aa13.77□□□□□ -0.21
SMARCD1-209ENST00000550477 NXT2Q9NPJ8 142 aaKnown RBP13.77□□□□□ -0.21
SMARCD1-209ENST00000550477 F8VRH5 84 aa13.76□□□□□ -0.21
SMARCD1-209ENST00000550477 CXCL5P42830 114 aa13.76□□□□□ -0.21
SMARCD1-209ENST00000550477 PNRC1Q12796 327 aaPredicted RBP13.76□□□□□ -0.21
SMARCD1-209ENST00000550477 ZC2HC1BQ5TFG8 222 aa13.76□□□□□ -0.21
SMARCD1-209ENST00000550477 FAM19A3Q7Z5A8 133 aa13.76□□□□□ -0.21
SMARCD1-209ENST00000550477 CTDSP1Q9GZU7 261 aa13.76□□□□□ -0.21
SMARCD1-209ENST00000550477 XAGE1AQ9HD64 81 aa13.76□□□□□ -0.21
SMARCD1-209ENST00000550477 TP73-AS1Q9UF72 201 aa13.76□□□□□ -0.21
SMARCD1-209ENST00000550477 LINC00173Q6ZV60 143 aa13.75□□□□□ -0.21
SMARCD1-209ENST00000550477 IGIPA6NJ69 53 aa13.74□□□□□ -0.21
SMARCD1-209ENST00000550477 MRPL55Q7Z7F7 128 aaKnown RBP13.74□□□□□ -0.21
SMARCD1-209ENST00000550477 TSPAN13O95857 204 aa13.72□□□□□ -0.21
SMARCD1-209ENST00000550477 CRYGAP11844 174 aa13.72□□□□□ -0.21
SMARCD1-209ENST00000550477 CDKN2A-AS1Q9UH64 79 aa13.72□□□□□ -0.21
SMARCD1-209ENST00000550477 BCE1O60756 84 aa13.71□□□□□ -0.21
SMARCD1-209ENST00000550477 TIMM17AQ99595 171 aa13.71□□□□□ -0.21
SMARCD1-209ENST00000550477 TYMSOSQ8TAI1 123 aa13.69□□□□□ -0.22
SMARCD1-209ENST00000550477 LINC01549A6NIU2 74 aa13.66□□□□□ -0.22
SMARCD1-209ENST00000550477 PDZD11Q5EBL8 140 aa13.66□□□□□ -0.22
SMARCD1-209ENST00000550477 TOMM6Q96B49 74 aa13.66□□□□□ -0.22
SMARCD1-209ENST00000550477 ERASQ7Z444 233 aa13.65□□□□□ -0.22
SMARCD1-209ENST00000550477 SCGB3A1Q96QR1 104 aa13.65□□□□□ -0.22
SMARCD1-209ENST00000550477 COX7B2Q8TF08 81 aa13.64□□□□□ -0.23
SMARCD1-209ENST00000550477 LINC00167Q96N53 147 aa13.64□□□□□ -0.23
SMARCD1-209ENST00000550477 RPL37AP8A6NKH3 93 aa13.63□□□□□ -0.23
SMARCD1-209ENST00000550477 NKAPP1Q8N9T2 125 aa13.63□□□□□ -0.23
SMARCD1-209ENST00000550477 TINCRA0A1B0GVN0 87 aa13.62□□□□□ -0.23
SMARCD1-209ENST00000550477 UBE2AP49459 152 aa13.62□□□□□ -0.23
SMARCD1-209ENST00000550477 RAB14P61106 215 aa13.62□□□□□ -0.23
SMARCD1-209ENST00000550477 A0A087X002 238 aa13.61□□□□□ -0.23
SMARCD1-209ENST00000550477 A0A1B0GVG6 124 aa13.61□□□□□ -0.23
SMARCD1-209ENST00000550477 SMIM1B2RUZ4 78 aa13.6□□□□□ -0.23
SMARCD1-209ENST00000550477 GAGE10A6NGK3 116 aa13.58□□□□□ -0.24
SMARCD1-209ENST00000550477 RAB5BP61020 215 aa13.58□□□□□ -0.24
SMARCD1-209ENST00000550477 ATP5LO75964 103 aa13.56□□□□□ -0.24
SMARCD1-209ENST00000550477 KIAA1644Q3SXP7 199 aa13.56□□□□□ -0.24
SMARCD1-209ENST00000550477 MRPL18Q9H0U6 180 aaKnown RBP13.56□□□□□ -0.24
SMARCD1-209ENST00000550477 IGLV5-37A0A075B6J1 123 aa13.55□□□□□ -0.24
SMARCD1-209ENST00000550477 IGLV5-45A0A087WSX0 123 aa13.55□□□□□ -0.24
SMARCD1-209ENST00000550477 H3BRM9 83 aa13.55□□□□□ -0.24
SMARCD1-209ENST00000550477 FAM229BQ4G0N7 80 aa13.55□□□□□ -0.24
SMARCD1-209ENST00000550477 TRAV9-1A0A075B6T8 112 aa13.53□□□□□ -0.24
SMARCD1-209ENST00000550477 CST9LQ9H4G1 147 aa13.53□□□□□ -0.24
SMARCD1-209ENST00000550477 IGKV2D-26A0A0A0MRZ7 120 aa13.52□□□□□ -0.25
SMARCD1-209ENST00000550477 SPINK8P0C7L1 97 aa13.52□□□□□ -0.25
SMARCD1-209ENST00000550477 PMVKQ15126 192 aa13.52□□□□□ -0.25
SMARCD1-209ENST00000550477 ADCYAP1P18509 176 aa13.51□□□□□ -0.25
SMARCD1-209ENST00000550477 LINC00304Q8N9R0 145 aa13.51□□□□□ -0.25
SMARCD1-209ENST00000550477 ANAPC11Q9NYG5 84 aa13.51□□□□□ -0.25
SMARCD1-209ENST00000550477 IGKV2-28A0A075B6P5 120 aa13.49□□□□□ -0.25
SMARCD1-209ENST00000550477 IGKV2D-28P01615 120 aa13.49□□□□□ -0.25
SMARCD1-209ENST00000550477 CTAG1AP78358 180 aa13.49□□□□□ -0.25
SMARCD1-209ENST00000550477 SMCO4Q9NRQ5 59 aa13.49□□□□□ -0.25
SMARCD1-209ENST00000550477 MUC2Q02817 5179 aa13.49□□□□□ -0.25
SMARCD1-209ENST00000550477 S100PP25815 95 aa13.48□□□□□ -0.25
SMARCD1-209ENST00000550477 RPL24P83731 157 aaKnown RBP13.48□□□□□ -0.25
SMARCD1-209ENST00000550477 FA2HQ7L5A8 372 aa13.48□□□□□ -0.25
SMARCD1-209ENST00000550477 KRTAP13-1Q8IUC0 172 aa13.48□□□□□ -0.25
SMARCD1-209ENST00000550477 PFN2P35080 140 aa13.47□□□□□ -0.25
SMARCD1-209ENST00000550477 COX19Q49B96 90 aa13.47□□□□□ -0.25
SMARCD1-209ENST00000550477 LINC01546A6NGU7 62 aa13.46□□□□□ -0.25
SMARCD1-209ENST00000550477 KRTAP13-2Q52LG2 175 aa13.46□□□□□ -0.25
SMARCD1-209ENST00000550477 FAM19A1Q7Z5A9 133 aa13.46□□□□□ -0.25
SMARCD1-209ENST00000550477 GNB1LQ9BYB4 327 aa13.46□□□□□ -0.25
SMARCD1-209ENST00000550477 CDIP1Q9H305 208 aa13.46□□□□□ -0.25
SMARCD1-209ENST00000550477 COX17Q14061 63 aa13.43□□□□□ -0.26
SMARCD1-209ENST00000550477 RETNLBQ9BQ08 111 aa13.43□□□□□ -0.26
SMARCD1-209ENST00000550477 NDUFA6P56556 154 aa13.41□□□□□ -0.26
SMARCD1-209ENST00000550477 PRLHP81277 87 aa13.41□□□□□ -0.26
SMARCD1-209ENST00000550477 TMEM126AQ9H061 195 aa13.41□□□□□ -0.26
SMARCD1-209ENST00000550477 IGLV7-46A0A075B6I9 117 aa13.4□□□□□ -0.26
SMARCD1-209ENST00000550477 IGLC3P0DOY3 106 aa13.4□□□□□ -0.26
SMARCD1-209ENST00000550477 SFTA2Q6UW10 78 aa13.4□□□□□ -0.26
SMARCD1-209ENST00000550477 UQCC3Q6UW78 93 aa13.4□□□□□ -0.26
SMARCD1-209ENST00000550477 ERG28Q9UKR5 140 aa13.4□□□□□ -0.26
SMARCD1-209ENST00000550477 SCO1O75880 301 aa13.39□□□□□ -0.27
SMARCD1-209ENST00000550477 FABP9Q0Z7S8 132 aa13.39□□□□□ -0.27
SMARCD1-209ENST00000550477 TPRXLQ17RH7 258 aa13.39□□□□□ -0.27
SMARCD1-209ENST00000550477 SND1-IT1Q9HBX3 110 aa13.39□□□□□ -0.27
SMARCD1-209ENST00000550477 VPREB1P12018 145 aa13.38□□□□□ -0.27
SMARCD1-209ENST00000550477 IGLV5-39A0A0G2JS06 123 aa13.37□□□□□ -0.27
SMARCD1-209ENST00000550477 CLLU1Q5K131 121 aa13.37□□□□□ -0.27
SMARCD1-209ENST00000550477 CBLN2Q8IUK8 224 aa13.37□□□□□ -0.27
SMARCD1-209ENST00000550477 TMEM218A2RU14 115 aa13.36□□□□□ -0.27
SMARCD1-209ENST00000550477 SPAG11AQ6PDA7 123 aa13.36□□□□□ -0.27
SMARCD1-209ENST00000550477 TMEM238C9JI98 176 aa13.35□□□□□ -0.27
SMARCD1-209ENST00000550477 PLEKHB2Q96CS7 222 aa13.35□□□□□ -0.27
SMARCD1-209ENST00000550477 KRTAP9-2Q9BYQ4 174 aa13.35□□□□□ -0.27
SMARCD1-209ENST00000550477 M0R378 163 aa13.33□□□□□ -0.28
SMARCD1-209ENST00000550477 ZNF22P17026 224 aaPredicted RBP13.33□□□□□ -0.28
SMARCD1-209ENST00000550477 C4orf48Q5BLP8 95 aa13.33□□□□□ -0.28
SMARCD1-209ENST00000550477 ZNF625Q96I27 306 aaPredicted RBP13.33□□□□□ -0.28
SMARCD1-209ENST00000550477 HIGD2AQ9BW72 106 aa13.32□□□□□ -0.28
SMARCD1-209ENST00000550477 SEC11CQ9BY50 192 aa13.31□□□□□ -0.28
SMARCD1-209ENST00000550477 TMEM170BQ5T4T1 132 aa13.3□□□□□ -0.28
SMARCD1-209ENST00000550477 PPDPFQ9H3Y8 114 aa13.3□□□□□ -0.28
SMARCD1-209ENST00000550477 ZNF706Q9Y5V0 76 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms