RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 PFN2P35080 140 aa14.29□□□□□ -0.12
PRDM4-205ENST00000550376 COL7A1Q02388 2944 aa14.29□□□□□ -0.12
PRDM4-205ENST00000550376 C6orf226Q5I0X4 101 aa14.29□□□□□ -0.12
PRDM4-205ENST00000550376 C11orf45Q8TAV5 145 aa14.29□□□□□ -0.12
PRDM4-205ENST00000550376 TCL1BO95988 128 aa14.29□□□□□ -0.12
PRDM4-205ENST00000550376 HUWE1Q7Z6Z7 4374 aaKnown RBP14.28□□□□□ -0.12
PRDM4-205ENST00000550376 WFDC10BQ8IUB3 73 aa14.28□□□□□ -0.12
PRDM4-205ENST00000550376 TEX48A0A1B0GUV7 120 aa14.28□□□□□ -0.12
PRDM4-205ENST00000550376 LINC00158P58513 81 aa14.27□□□□□ -0.13
PRDM4-205ENST00000550376 MIR7-3HGQ8N6C7 128 aa14.27□□□□□ -0.13
PRDM4-205ENST00000550376 DEFB131BA0A096LNP1 70 aa14.26□□□□□ -0.13
PRDM4-205ENST00000550376 HERV-K104P63124 156 aa14.26□□□□□ -0.13
PRDM4-205ENST00000550376 LINC00526Q96FQ7 95 aa14.26□□□□□ -0.13
PRDM4-205ENST00000550376 SH2D6Q7Z4S9 175 aa14.25□□□□□ -0.13
PRDM4-205ENST00000550376 STAB2Q8WWQ8 2551 aa14.25□□□□□ -0.13
PRDM4-205ENST00000550376 IFITM1P13164 125 aa14.25□□□□□ -0.13
PRDM4-205ENST00000550376 ESRGQ1W209 222 aa14.24□□□□□ -0.13
PRDM4-205ENST00000550376 CD164L2Q6UWJ8 174 aa14.24□□□□□ -0.13
PRDM4-205ENST00000550376 TRIAP1O43715 76 aa14.24□□□□□ -0.13
PRDM4-205ENST00000550376 COX7A2LO14548 114 aa14.23□□□□□ -0.13
PRDM4-205ENST00000550376 RPL13AP40429 203 aaKnown RBP14.23□□□□□ -0.13
PRDM4-205ENST00000550376 ENHOQ6UWT2 76 aa14.23□□□□□ -0.13
PRDM4-205ENST00000550376 PRO0461Q9UI25 63 aa14.23□□□□□ -0.13
PRDM4-205ENST00000550376 MALP21145 153 aa14.22□□□□□ -0.13
PRDM4-205ENST00000550376 UBE2WQ96B02 151 aa14.22□□□□□ -0.13
PRDM4-205ENST00000550376 GAGE12HA6NDE8 117 aa14.22□□□□□ -0.13
PRDM4-205ENST00000550376 ETDBQ3ZM63 59 aa14.22□□□□□ -0.13
PRDM4-205ENST00000550376 FOXI1Q12951 378 aa14.21□□□□□ -0.13
PRDM4-205ENST00000550376 SMCPP49901 116 aaPredicted RBP14.2□□□□□ -0.14
PRDM4-205ENST00000550376 C9orf116Q5BN46 136 aaPredicted RBP14.2□□□□□ -0.14
PRDM4-205ENST00000550376 C6orf223Q8N319 242 aa14.2□□□□□ -0.14
PRDM4-205ENST00000550376 F8W1H4 67 aa14.19□□□□□ -0.14
PRDM4-205ENST00000550376 KIAA0087Q14695 138 aa14.18□□□□□ -0.14
PRDM4-205ENST00000550376 CKS1BP61024 79 aa14.18□□□□□ -0.14
PRDM4-205ENST00000550376 SPATA25Q9BR10 227 aa14.17□□□□□ -0.14
PRDM4-205ENST00000550376 Q8IZM0 81 aa14.17□□□□□ -0.14
PRDM4-205ENST00000550376 PRR34Q9NV39 138 aa14.17□□□□□ -0.14
PRDM4-205ENST00000550376 CLEC2BQ92478 149 aa14.16□□□□□ -0.14
PRDM4-205ENST00000550376 CCL18P55774 89 aa14.16□□□□□ -0.14
PRDM4-205ENST00000550376 TM2D3Q9BRN9 247 aa14.16□□□□□ -0.14
PRDM4-205ENST00000550376 H3BNG1 76 aa14.15□□□□□ -0.14
PRDM4-205ENST00000550376 IBA57-AS1B1ANH7 110 aa14.15□□□□□ -0.14
PRDM4-205ENST00000550376 SND1-IT1Q9HBX3 110 aa14.15□□□□□ -0.14
PRDM4-205ENST00000550376 TRBV30A0A0K0K1B3 111 aa14.14□□□□□ -0.15
PRDM4-205ENST00000550376 C10orf25Q5T742 122 aa14.14□□□□□ -0.15
PRDM4-205ENST00000550376 LYRM7Q5U5X0 104 aa14.14□□□□□ -0.15
PRDM4-205ENST00000550376 CRPP02741 224 aa14.13□□□□□ -0.15
PRDM4-205ENST00000550376 CFAP161Q6P656 301 aa14.13□□□□□ -0.15
PRDM4-205ENST00000550376 TRBV20-1A0A075B6N2 111 aa14.13□□□□□ -0.15
PRDM4-205ENST00000550376 IGKV2-28A0A075B6P5 120 aa14.12□□□□□ -0.15
PRDM4-205ENST00000550376 IGKV2D-28P01615 120 aa14.12□□□□□ -0.15
PRDM4-205ENST00000550376 LYSTQ99698 3801 aa14.12□□□□□ -0.15
PRDM4-205ENST00000550376 C9JAW5 83 aa14.12□□□□□ -0.15
PRDM4-205ENST00000550376 UNQ6190/PRO20217Q6UXQ8 127 aa14.12□□□□□ -0.15
PRDM4-205ENST00000550376 TENM2Q9NT68 2774 aa14.11□□□□□ -0.15
PRDM4-205ENST00000550376 LINC00337Q8N6G1 96 aa14.11□□□□□ -0.15
PRDM4-205ENST00000550376 PRR3P79522 188 aaKnown RBP14.11□□□□□ -0.15
PRDM4-205ENST00000550376 COPS9Q8WXC6 57 aa14.09□□□□□ -0.15
PRDM4-205ENST00000550376 SPAG11BQ08648 103 aa14.09□□□□□ -0.15
PRDM4-205ENST00000550376 DNAH9Q9NYC9 4486 aa14.08□□□□□ -0.16
PRDM4-205ENST00000550376 LINC01561Q8N1V8 128 aa14.07□□□□□ -0.16
PRDM4-205ENST00000550376 HIGD2BQ4VC39 106 aa14.07□□□□□ -0.16
PRDM4-205ENST00000550376 SIGMAR1Q99720 223 aa14.06□□□□□ -0.16
PRDM4-205ENST00000550376 ATXN8Q156A1 80 aa14.06□□□□□ -0.16
PRDM4-205ENST00000550376 TRAV10A0A0B4J240 114 aa14.05□□□□□ -0.16
PRDM4-205ENST00000550376 COX6CP09669 75 aa14.05□□□□□ -0.16
PRDM4-205ENST00000550376 LINC01620Q4KN68 170 aa14.05□□□□□ -0.16
PRDM4-205ENST00000550376 SLC25A20O43772 301 aa14.04□□□□□ -0.16
PRDM4-205ENST00000550376 Q9HAA7 133 aa14.04□□□□□ -0.16
PRDM4-205ENST00000550376 KLK5Q9Y337 293 aaPredicted RBP14.04□□□□□ -0.16
PRDM4-205ENST00000550376 OR13C6PQ8NH95 151 aa14.03□□□□□ -0.16
PRDM4-205ENST00000550376 LINC00588Q9Y4M8 146 aa14.02□□□□□ -0.16
PRDM4-205ENST00000550376 KRTAP26-1Q6PEX3 210 aa14.02□□□□□ -0.17
PRDM4-205ENST00000550376 Q8NDZ9 215 aa14.02□□□□□ -0.17
PRDM4-205ENST00000550376 TRAV8-4A0A0B4J246 113 aa14.01□□□□□ -0.17
PRDM4-205ENST00000550376 IGKV2D-24A0A075B6R9 120 aa14□□□□□ -0.17
PRDM4-205ENST00000550376 ANKRD29Q8N6D5 301 aa14□□□□□ -0.17
PRDM4-205ENST00000550376 DNHD1Q96M86 4753 aa14□□□□□ -0.17
PRDM4-205ENST00000550376 TRAV13-2A0A0B4J235 113 aa14□□□□□ -0.17
PRDM4-205ENST00000550376 CXCL5P42830 114 aa13.99□□□□□ -0.17
PRDM4-205ENST00000550376 LINC01556Q5JQF7 62 aa13.99□□□□□ -0.17
PRDM4-205ENST00000550376 SMIM11BQ8TCY0 68 aa13.99□□□□□ -0.17
PRDM4-205ENST00000550376 CARD19Q96LW7 228 aa13.99□□□□□ -0.17
PRDM4-205ENST00000550376 FAM218AQ96MZ4 157 aa13.99□□□□□ -0.17
PRDM4-205ENST00000550376 LST1O00453 97 aa13.98□□□□□ -0.17
PRDM4-205ENST00000550376 SCGB1A1P11684 91 aa13.97□□□□□ -0.17
PRDM4-205ENST00000550376 CSMD3Q7Z407 3707 aa13.97□□□□□ -0.17
PRDM4-205ENST00000550376 C1orf43Q9BWL3 253 aa13.96□□□□□ -0.17
PRDM4-205ENST00000550376 C6orf48Q9UBA6 75 aa13.96□□□□□ -0.17
PRDM4-205ENST00000550376 J3QR89 54 aa13.95□□□□□ -0.18
PRDM4-205ENST00000550376 TEN1Q86WV5 123 aa13.95□□□□□ -0.18
PRDM4-205ENST00000550376 NTN5Q8WTR8 489 aaPredicted RBP13.95□□□□□ -0.18
PRDM4-205ENST00000550376 ZNF561-AS1K7EIQ3 104 aa13.94□□□□□ -0.18
PRDM4-205ENST00000550376 C15orf56Q8N910 161 aa13.94□□□□□ -0.18
PRDM4-205ENST00000550376 PPDPFQ9H3Y8 114 aa13.94□□□□□ -0.18
PRDM4-205ENST00000550376 XAGE1AQ9HD64 81 aa13.94□□□□□ -0.18
PRDM4-205ENST00000550376 NCR3O14931 201 aa13.94□□□□□ -0.18
PRDM4-205ENST00000550376 COX17Q14061 63 aa13.94□□□□□ -0.18
PRDM4-205ENST00000550376 TRBV10-2A0A0K0K1G8 114 aa13.93□□□□□ -0.18
PRDM4-205ENST00000550376 C15orf53Q8NAA6 179 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms