RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 ANKRD29Q8N6D5 301 aa6.81□□□□□ -1.32
RAB5B-206ENST00000549505 TM2D3Q9BRN9 247 aa6.81□□□□□ -1.32
RAB5B-206ENST00000549505 TCL1BO95988 128 aa6.8□□□□□ -1.32
RAB5B-206ENST00000549505 ANK2Q01484 3957 aa6.8□□□□□ -1.32
RAB5B-206ENST00000549505 TRAV8-4A0A0B4J246 113 aa6.79□□□□□ -1.32
RAB5B-206ENST00000549505 TMEM262E9PQX1 116 aa6.79□□□□□ -1.32
RAB5B-206ENST00000549505 TEP1Q99973 2627 aaKnown RBP6.79□□□□□ -1.32
RAB5B-206ENST00000549505 GVQW2A0A096LPI5 108 aaPredicted RBP6.79□□□□□ -1.32
RAB5B-206ENST00000549505 DEFB4AO15263 64 aa6.79□□□□□ -1.32
RAB5B-206ENST00000549505 REG3AQ06141 175 aa6.79□□□□□ -1.32
RAB5B-206ENST00000549505 C5orf47Q569G3 176 aa6.79□□□□□ -1.32
RAB5B-206ENST00000549505 PPDPFLQ8WWR9 84 aa6.79□□□□□ -1.32
RAB5B-206ENST00000549505 CYSRT1A8MQ03 144 aa6.78□□□□□ -1.32
RAB5B-206ENST00000549505 F8WDY8 70 aa6.78□□□□□ -1.32
RAB5B-206ENST00000549505 KRTAP26-1Q6PEX3 210 aa6.78□□□□□ -1.32
RAB5B-206ENST00000549505 TRIAP1O43715 76 aa6.78□□□□□ -1.32
RAB5B-206ENST00000549505 PRSS2P07478 247 aa6.77□□□□□ -1.33
RAB5B-206ENST00000549505 COX7A2LO14548 114 aa6.77□□□□□ -1.33
RAB5B-206ENST00000549505 NDUFC2O95298 119 aa6.77□□□□□ -1.33
RAB5B-206ENST00000549505 ATXN8Q156A1 80 aa6.77□□□□□ -1.33
RAB5B-206ENST00000549505 LINC00269Q8N2A0 174 aa6.77□□□□□ -1.33
RAB5B-206ENST00000549505 CHCHD10Q8WYQ3 142 aaPredicted RBP6.77□□□□□ -1.33
RAB5B-206ENST00000549505 A0A0J9YWU9 116 aa6.76□□□□□ -1.33
RAB5B-206ENST00000549505 TEN1Q86WV5 123 aa6.76□□□□□ -1.33
RAB5B-206ENST00000549505 C15orf53Q8NAA6 179 aa6.76□□□□□ -1.33
RAB5B-206ENST00000549505 WNK1Q9H4A3 2382 aa6.76□□□□□ -1.33
RAB5B-206ENST00000549505 TRAV13-2A0A0B4J235 113 aa6.76□□□□□ -1.33
RAB5B-206ENST00000549505 C9JAW5 83 aa6.76□□□□□ -1.33
RAB5B-206ENST00000549505 RPL28P46779 137 aaKnown RBP6.76□□□□□ -1.33
RAB5B-206ENST00000549505 ENHOQ6UWT2 76 aa6.76□□□□□ -1.33
RAB5B-206ENST00000549505 FAM19A5Q7Z5A7 132 aaPredicted RBP6.76□□□□□ -1.33
RAB5B-206ENST00000549505 LST1O00453 97 aa6.76□□□□□ -1.33
RAB5B-206ENST00000549505 NOTCH2Q04721 2471 aa6.75□□□□□ -1.33
RAB5B-206ENST00000549505 IGKV2-28A0A075B6P5 120 aa6.75□□□□□ -1.33
RAB5B-206ENST00000549505 IGKV2D-28P01615 120 aa6.75□□□□□ -1.33
RAB5B-206ENST00000549505 NTN5Q8WTR8 489 aaPredicted RBP6.75□□□□□ -1.33
RAB5B-206ENST00000549505 RPL13AP40429 203 aaKnown RBP6.74□□□□□ -1.33
RAB5B-206ENST00000549505 FBN1P35555 2871 aaKnown RBP6.74□□□□□ -1.33
RAB5B-206ENST00000549505 TRBV10-2A0A0K0K1G8 114 aa6.74□□□□□ -1.33
RAB5B-206ENST00000549505 TEX49A0A1B0GTD5 131 aa6.74□□□□□ -1.33
RAB5B-206ENST00000549505 DEFB121Q5J5C9 76 aa6.74□□□□□ -1.33
RAB5B-206ENST00000549505 LINC01556Q5JQF7 62 aa6.74□□□□□ -1.33
RAB5B-206ENST00000549505 C5orf38Q86SI9 138 aa6.74□□□□□ -1.33
RAB5B-206ENST00000549505 RETNQ9HD89 108 aa6.74□□□□□ -1.33
RAB5B-206ENST00000549505 H3BT86 120 aa6.74□□□□□ -1.33
RAB5B-206ENST00000549505 COX6CP09669 75 aa6.74□□□□□ -1.33
RAB5B-206ENST00000549505 LINC01620Q4KN68 170 aa6.74□□□□□ -1.33
RAB5B-206ENST00000549505 C9orf153Q5TBE3 101 aa6.74□□□□□ -1.33
RAB5B-206ENST00000549505 MIR7-3HGQ8N6C7 128 aa6.74□□□□□ -1.33
RAB5B-206ENST00000549505 XCL1P47992 114 aa6.73□□□□□ -1.33
RAB5B-206ENST00000549505 CCL18P55774 89 aa6.73□□□□□ -1.33
RAB5B-206ENST00000549505 Q6ZTC4 211 aa6.73□□□□□ -1.33
RAB5B-206ENST00000549505 ANGP03950 147 aaKnown RBP6.73□□□□□ -1.33
RAB5B-206ENST00000549505 TRACP01848 142 aa6.72□□□□□ -1.33
RAB5B-206ENST00000549505 DNAH10OSP0CZ25 163 aa6.72□□□□□ -1.33
RAB5B-206ENST00000549505 DAND5Q8N907 189 aa6.72□□□□□ -1.33
RAB5B-206ENST00000549505 K7EIL1 84 aa6.72□□□□□ -1.33
RAB5B-206ENST00000549505 C6orf226Q5I0X4 101 aa6.72□□□□□ -1.33
RAB5B-206ENST00000549505 HRCT1Q6UXD1 115 aa6.72□□□□□ -1.33
RAB5B-206ENST00000549505 C11orf45Q8TAV5 145 aa6.72□□□□□ -1.33
RAB5B-206ENST00000549505 TRAV10A0A0B4J240 114 aa6.71□□□□□ -1.34
RAB5B-206ENST00000549505 FAM236AA0A1B0GUQ0 79 aa6.71□□□□□ -1.34
RAB5B-206ENST00000549505 FAM236BA0A1B0GV22 79 aa6.71□□□□□ -1.34
RAB5B-206ENST00000549505 Q1RN00 199 aa6.71□□□□□ -1.34
RAB5B-206ENST00000549505 UPK3BQ9BT76 320 aa6.71□□□□□ -1.34
RAB5B-206ENST00000549505 SND1-IT1Q9HBX3 110 aa6.71□□□□□ -1.34
RAB5B-206ENST00000549505 SLC25A20O43772 301 aa6.71□□□□□ -1.34
RAB5B-206ENST00000549505 Q8N3U1 123 aa6.71□□□□□ -1.34
RAB5B-206ENST00000549505 ESRGQ1W209 222 aa6.7□□□□□ -1.34
RAB5B-206ENST00000549505 LINC00337Q8N6G1 96 aa6.7□□□□□ -1.34
RAB5B-206ENST00000549505 TRRAPQ9Y4A5 3859 aa6.7□□□□□ -1.34
RAB5B-206ENST00000549505 C2orf48Q96LS8 159 aa6.7□□□□□ -1.34
RAB5B-206ENST00000549505 DEFB131BA0A096LNP1 70 aa6.7□□□□□ -1.34
RAB5B-206ENST00000549505 C4orf26Q17RF5 130 aa6.7□□□□□ -1.34
RAB5B-206ENST00000549505 JMJD1CQ15652 2540 aa6.69□□□□□ -1.34
RAB5B-206ENST00000549505 A0A1B0GX51 115 aa6.69□□□□□ -1.34
RAB5B-206ENST00000549505 LINC00158P58513 81 aa6.69□□□□□ -1.34
RAB5B-206ENST00000549505 C2orf82Q6UX34 121 aa6.69□□□□□ -1.34
RAB5B-206ENST00000549505 LINC00167Q96N53 147 aa6.69□□□□□ -1.34
RAB5B-206ENST00000549505 BAHCC1Q9P281 2608 aa6.69□□□□□ -1.34
RAB5B-206ENST00000549505 H0YGX0 51 aa6.68□□□□□ -1.34
RAB5B-206ENST00000549505 TOMM7Q9P0U1 55 aa6.68□□□□□ -1.34
RAB5B-206ENST00000549505 PKIGQ9Y2B9 76 aa6.68□□□□□ -1.34
RAB5B-206ENST00000549505 IGKV3OR2-268A0A0C4DH90 116 aa6.68□□□□□ -1.34
RAB5B-206ENST00000549505 CRPP02741 224 aa6.67□□□□□ -1.34
RAB5B-206ENST00000549505 WFDC10BQ8IUB3 73 aa6.67□□□□□ -1.34
RAB5B-206ENST00000549505 DYNC2H1Q8NCM8 4307 aaKnown RBP6.67□□□□□ -1.34
RAB5B-206ENST00000549505 HTN3P15516 51 aa6.67□□□□□ -1.34
RAB5B-206ENST00000549505 NANOS2P60321 138 aaKnown RBP6.67□□□□□ -1.34
RAB5B-206ENST00000549505 NPC2P61916 151 aa6.67□□□□□ -1.34
RAB5B-206ENST00000549505 KLK12Q9UKR0 248 aa6.67□□□□□ -1.34
RAB5B-206ENST00000549505 NOTCH3Q9UM47 2321 aa6.67□□□□□ -1.34
RAB5B-206ENST00000549505 MALP21145 153 aa6.67□□□□□ -1.34
RAB5B-206ENST00000549505 SPAG11BQ08648 103 aa6.66□□□□□ -1.34
RAB5B-206ENST00000549505 DNAH1Q9P2D7 4330 aa6.66□□□□□ -1.34
RAB5B-206ENST00000549505 F8P00451 2351 aa6.66□□□□□ -1.34
RAB5B-206ENST00000549505 CLPSL2Q6UWE3 100 aa6.66□□□□□ -1.34
RAB5B-206ENST00000549505 C1orf43Q9BWL3 253 aa6.66□□□□□ -1.34
RAB5B-206ENST00000549505 DSCR8Q96T75 97 aa6.65□□□□□ -1.34
RAB5B-206ENST00000549505 SMIM11BQ8TCY0 68 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms