RNA–Protein interactions for RNA: ENST00000549015.1

LGR5-205, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 298 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-205ENST00000549015 CDKN2A-AS1Q9UH64 79 aa1.16□□□□□ -2.22
LGR5-205ENST00000549015 CELSR1Q9NYQ6 3014 aa1.16□□□□□ -2.22
LGR5-205ENST00000549015 CSPG4Q6UVK1 2322 aa1.16□□□□□ -2.22
LGR5-205ENST00000549015 FASNP49327 2511 aaKnown RBP1.16□□□□□ -2.22
LGR5-205ENST00000549015 CSMD1Q96PZ7 3565 aa1.16□□□□□ -2.22
LGR5-205ENST00000549015 MXRA5Q9NR99 2828 aa1.16□□□□□ -2.22
LGR5-205ENST00000549015 ZANQ9Y493 2812 aa1.16□□□□□ -2.22
LGR5-205ENST00000549015 ASH1LQ9NR48 2969 aaKnown RBP1.15□□□□□ -2.22
LGR5-205ENST00000549015 MED13LQ71F56 2210 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 MTORP42345 2549 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 HECTD1Q9ULT8 2610 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 PDZD2O15018 2839 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 CELSR2Q9HCU4 2923 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 GVQW2A0A096LPI5 108 aaPredicted RBP1.15□□□□□ -2.23
LGR5-205ENST00000549015 TRAV8-3A0A0A6YYJ7 113 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 IGHV3-73A0A0B4J1V6 119 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 TRAV13-1A0A0B4J241 112 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 TRAV8-4A0A0B4J246 113 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 IGHV3-38A0A0C4DH36 116 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 A0A0J9YWU9 116 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 LOC100131303A0A0U1RQF7 123 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 LINC00959A0A1B0GUT2 108 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 H0YGX0 51 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 H3BQ85 93 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 SNCGO76070 127 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 TCL1BO95988 128 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 SPINK8P0C7L1 97 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 INAFM2P0DMQ5 153 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 SCGB1C2P0DMR2 95 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 RPL28P46779 137 aaKnown RBP1.15□□□□□ -2.23
LGR5-205ENST00000549015 PSMB2P49721 201 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 NDUFV3P56181 108 aaKnown RBP1.15□□□□□ -2.23
LGR5-205ENST00000549015 NANOS2P60321 138 aaKnown RBP1.15□□□□□ -2.23
LGR5-205ENST00000549015 KRTAP10-3P60369 221 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 DAD1P61803 113 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 ADAMTSL4-AS1Q5T5F5 129 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 LELP1Q5T871 98 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 CEMP1Q6PRD7 247 aaPredicted RBP1.15□□□□□ -2.23
LGR5-205ENST00000549015 C2orf82Q6UX34 121 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 NTM-AS1Q6ZSK4 140 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 MUSTN1Q8IVN3 82 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 ANKRD29Q8N6D5 301 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.15□□□□□ -2.23
LGR5-205ENST00000549015 Q8NAQ8 132 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 UBE2WQ96B02 151 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 OPRPNQ99935 248 aaPredicted RBP1.15□□□□□ -2.23
LGR5-205ENST00000549015 WFDC10AQ9H1F0 79 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 PRR34Q9NV39 138 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 ICOSQ9Y6W8 199 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 UTP20O75691 2785 aaKnown RBP1.15□□□□□ -2.23
LGR5-205ENST00000549015 OTOGQ6ZRI0 2925 aa1.15□□□□□ -2.23
LGR5-205ENST00000549015 GCN1Q92616 2671 aaKnown RBP1.14□□□□□ -2.23
LGR5-205ENST00000549015 MUC4Q99102 2169 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 SONP18583 2426 aaKnown RBP1.14□□□□□ -2.23
LGR5-205ENST00000549015 IGLV7-46A0A075B6I9 117 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 IGHV3-64A0A075B6Q5 118 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 RPL37AP8A6NKH3 93 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 C9JAW5 83 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 DNAL4O96015 105 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 DEFB130BP0DP73 79 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 DEFB130AP0DP74 79 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 CKS1BP61024 79 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 COX6A2Q02221 97 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 REG3AQ06141 175 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 WFDC2Q14508 124 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 DEFB135Q30KP9 77 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 ETDBQ3ZM63 59 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 RNASE13Q5GAN3 156 aaKnown RBP1.14□□□□□ -2.23
LGR5-205ENST00000549015 DEFB121Q5J5C9 76 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 Q6Q795 121 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 MIR7-3HGQ8N6C7 128 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 DAND5Q8N907 189 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 C15orf53Q8NAA6 179 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 C11orf45Q8TAV5 145 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 SIGMAR1Q99720 223 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 NAA38Q9BRA0 125 aaKnown RBP1.14□□□□□ -2.23
LGR5-205ENST00000549015 IMUPQ9GZP8 106 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 TMEM126AQ9H061 195 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 SND1-IT1Q9HBX3 110 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 Q9UF83 564 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 PKIGQ9Y2B9 76 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 KLK5Q9Y337 293 aaPredicted RBP1.14□□□□□ -2.23
LGR5-205ENST00000549015 C2CD3Q4AC94 2353 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 CRYBG3Q68DQ2 2970 aa1.14□□□□□ -2.23
LGR5-205ENST00000549015 VPS13CQ709C8 3753 aa1.13□□□□□ -2.23
LGR5-205ENST00000549015 SETXQ7Z333 2677 aaKnown RBP1.13□□□□□ -2.23
LGR5-205ENST00000549015 NOTCH2Q04721 2471 aa1.13□□□□□ -2.23
LGR5-205ENST00000549015 NIPBLQ6KC79 2804 aaeCLIP1.13□□□□□ -2.23
LGR5-205ENST00000549015 ITPR2Q14571 2701 aa1.13□□□□□ -2.23
LGR5-205ENST00000549015 TEX15Q9BXT5 2789 aa1.13□□□□□ -2.23
LGR5-205ENST00000549015 IGLV4-60A0A075B6I1 120 aa1.13□□□□□ -2.23
LGR5-205ENST00000549015 IGKV2D-30A0A075B6S6 120 aa1.13□□□□□ -2.23
LGR5-205ENST00000549015 TRBV7-6A0A0J9YX20 115 aa1.13□□□□□ -2.23
LGR5-205ENST00000549015 TRBV7-7A0A0K0K1E9 115 aa1.13□□□□□ -2.23
LGR5-205ENST00000549015 A0A1B0GV72 72 aa1.13□□□□□ -2.23
LGR5-205ENST00000549015 JMJD7-PLA2G4BH0Y9G9 81 aa1.13□□□□□ -2.23
LGR5-205ENST00000549015 H7C2G1 150 aa1.13□□□□□ -2.23
LGR5-205ENST00000549015 ANGP03950 147 aaKnown RBP1.13□□□□□ -2.23
LGR5-205ENST00000549015 PRM2P04554 102 aa1.13□□□□□ -2.23
LGR5-205ENST00000549015 DNAH10OSP0CZ25 163 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms