RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 LRRC75A-AS1Q8N1F1 130 aa9.85□□□□□ -0.83
RAPGEF3-218ENST00000548919 LINC01006Q8NI28 216 aa9.85□□□□□ -0.83
RAPGEF3-218ENST00000548919 LINC00959A0A1B0GUT2 108 aa9.85□□□□□ -0.83
RAPGEF3-218ENST00000548919 IGLV1-51P01701 117 aa9.84□□□□□ -0.83
RAPGEF3-218ENST00000548919 C6orf226Q5I0X4 101 aa9.84□□□□□ -0.83
RAPGEF3-218ENST00000548919 TENM4Q6N022 2769 aa9.84□□□□□ -0.83
RAPGEF3-218ENST00000548919 A0A096LPF7 62 aa9.84□□□□□ -0.83
RAPGEF3-218ENST00000548919 VWFP04275 2813 aa9.84□□□□□ -0.83
RAPGEF3-218ENST00000548919 NCR3O14931 201 aa9.83□□□□□ -0.84
RAPGEF3-218ENST00000548919 PRR3P79522 188 aaKnown RBP9.82□□□□□ -0.84
RAPGEF3-218ENST00000548919 ZNF843Q8N446 348 aa9.82□□□□□ -0.84
RAPGEF3-218ENST00000548919 H0YGX0 51 aa9.81□□□□□ -0.84
RAPGEF3-218ENST00000548919 GYPEP15421 78 aa9.81□□□□□ -0.84
RAPGEF3-218ENST00000548919 ITPR2Q14571 2701 aa9.81□□□□□ -0.84
RAPGEF3-218ENST00000548919 IGKV3D-7A0A0C4DH55 119 aa9.8□□□□□ -0.84
RAPGEF3-218ENST00000548919 CMC4P56277 68 aaPredicted RBP9.8□□□□□ -0.84
RAPGEF3-218ENST00000548919 LINC00846Q9NV44 126 aa9.8□□□□□ -0.84
RAPGEF3-218ENST00000548919 C9orf153Q5TBE3 101 aa9.8□□□□□ -0.84
RAPGEF3-218ENST00000548919 CXCL5P42830 114 aa9.79□□□□□ -0.84
RAPGEF3-218ENST00000548919 C3orf22Q8N5N4 141 aa9.79□□□□□ -0.84
RAPGEF3-218ENST00000548919 PDZD2O15018 2839 aa9.79□□□□□ -0.84
RAPGEF3-218ENST00000548919 OBSCN-AS1Q96MR7 158 aa9.78□□□□□ -0.84
RAPGEF3-218ENST00000548919 KLK5Q9Y337 293 aaPredicted RBP9.78□□□□□ -0.84
RAPGEF3-218ENST00000548919 ANK3Q12955 4377 aaKnown RBP9.78□□□□□ -0.84
RAPGEF3-218ENST00000548919 Q8N3U1 123 aa9.77□□□□□ -0.85
RAPGEF3-218ENST00000548919 FAM110AQ9BQ89 295 aa9.77□□□□□ -0.85
RAPGEF3-218ENST00000548919 SS18Q15532 418 aa9.76□□□□□ -0.85
RAPGEF3-218ENST00000548919 A0A087WVE0 104 aa9.76□□□□□ -0.85
RAPGEF3-218ENST00000548919 UQCRQO14949 82 aa9.76□□□□□ -0.85
RAPGEF3-218ENST00000548919 LY6G6DO95868 133 aa9.76□□□□□ -0.85
RAPGEF3-218ENST00000548919 TMEM126AQ9H061 195 aa9.76□□□□□ -0.85
RAPGEF3-218ENST00000548919 IGLV10-54A0A075B6I4 117 aa9.75□□□□□ -0.85
RAPGEF3-218ENST00000548919 ORMDL1Q9P0S3 153 aa9.75□□□□□ -0.85
RAPGEF3-218ENST00000548919 NANOS2P60321 138 aaKnown RBP9.75□□□□□ -0.85
RAPGEF3-218ENST00000548919 C9orf116Q5BN46 136 aaPredicted RBP9.75□□□□□ -0.85
RAPGEF3-218ENST00000548919 Q8IZM0 81 aa9.75□□□□□ -0.85
RAPGEF3-218ENST00000548919 LINC00526Q96FQ7 95 aa9.74□□□□□ -0.85
RAPGEF3-218ENST00000548919 HIST1H4AP62805 103 aaKnown RBP9.74□□□□□ -0.85
RAPGEF3-218ENST00000548919 LINC00269Q8N2A0 174 aa9.74□□□□□ -0.85
RAPGEF3-218ENST00000548919 C2orf48Q96LS8 159 aa9.74□□□□□ -0.85
RAPGEF3-218ENST00000548919 DEFB4AO15263 64 aa9.73□□□□□ -0.85
RAPGEF3-218ENST00000548919 RNASE1P07998 156 aaKnown RBP9.73□□□□□ -0.85
RAPGEF3-218ENST00000548919 KRTAP1-1Q07627 177 aa9.73□□□□□ -0.85
RAPGEF3-218ENST00000548919 KIR2DL5BQ8NHK3 375 aa9.73□□□□□ -0.85
RAPGEF3-218ENST00000548919 C16orf95Q9H693 158 aa9.73□□□□□ -0.85
RAPGEF3-218ENST00000548919 A0A1B0GUV1 79 aa9.72□□□□□ -0.85
RAPGEF3-218ENST00000548919 COX7CP15954 63 aa9.72□□□□□ -0.85
RAPGEF3-218ENST00000548919 X6R8D5 127 aa9.71□□□□□ -0.85
RAPGEF3-218ENST00000548919 Q8NDZ9 215 aa9.71□□□□□ -0.86
RAPGEF3-218ENST00000548919 CYSTM1Q9H1C7 97 aa9.71□□□□□ -0.86
RAPGEF3-218ENST00000548919 KIAA0087Q14695 138 aa9.7□□□□□ -0.86
RAPGEF3-218ENST00000548919 Q6JHZ5 121 aa9.7□□□□□ -0.86
RAPGEF3-218ENST00000548919 LINC00612Q8N6U2 182 aa9.7□□□□□ -0.86
RAPGEF3-218ENST00000548919 PRO0255Q9UI72 69 aa9.7□□□□□ -0.86
RAPGEF3-218ENST00000548919 Q8N814 137 aa9.7□□□□□ -0.86
RAPGEF3-218ENST00000548919 A0A1B0GX51 115 aa9.69□□□□□ -0.86
RAPGEF3-218ENST00000548919 ATOX1O00244 68 aa9.69□□□□□ -0.86
RAPGEF3-218ENST00000548919 LINC01561Q8N1V8 128 aa9.69□□□□□ -0.86
RAPGEF3-218ENST00000548919 LINC00482Q8N8I6 264 aa9.69□□□□□ -0.86
RAPGEF3-218ENST00000548919 RPL18AQ02543 176 aaKnown RBP9.69□□□□□ -0.86
RAPGEF3-218ENST00000548919 CHCHD10Q8WYQ3 142 aaPredicted RBP9.69□□□□□ -0.86
RAPGEF3-218ENST00000548919 HIVEP2P31629 2446 aa9.69□□□□□ -0.86
RAPGEF3-218ENST00000548919 hADV29S1A0JD25 119 aa9.69□□□□□ -0.86
RAPGEF3-218ENST00000548919 ANGP03950 147 aaKnown RBP9.69□□□□□ -0.86
RAPGEF3-218ENST00000548919 CCKP06307 115 aa9.68□□□□□ -0.86
RAPGEF3-218ENST00000548919 KRTAP10-3P60369 221 aa9.68□□□□□ -0.86
RAPGEF3-218ENST00000548919 WFDC9Q8NEX5 89 aa9.68□□□□□ -0.86
RAPGEF3-218ENST00000548919 SPATA3Q8NHX4 192 aa9.68□□□□□ -0.86
RAPGEF3-218ENST00000548919 TENM1Q9UKZ4 2725 aa9.67□□□□□ -0.86
RAPGEF3-218ENST00000548919 C6orf99Q4VX62 202 aa9.67□□□□□ -0.86
RAPGEF3-218ENST00000548919 CD164L2Q6UWJ8 174 aa9.67□□□□□ -0.86
RAPGEF3-218ENST00000548919 LINC00167Q96N53 147 aa9.67□□□□□ -0.86
RAPGEF3-218ENST00000548919 LOC107984640A0A0U1RRK4 108 aa9.66□□□□□ -0.86
RAPGEF3-218ENST00000548919 REG3AQ06141 175 aa9.66□□□□□ -0.86
RAPGEF3-218ENST00000548919 C6orf223Q8N319 242 aa9.66□□□□□ -0.86
RAPGEF3-218ENST00000548919 HILS1P60008 231 aa9.65□□□□□ -0.86
RAPGEF3-218ENST00000548919 CRYGAP11844 174 aa9.65□□□□□ -0.86
RAPGEF3-218ENST00000548919 DEFB135Q30KP9 77 aa9.65□□□□□ -0.86
RAPGEF3-218ENST00000548919 C10orf25Q5T742 122 aa9.65□□□□□ -0.86
RAPGEF3-218ENST00000548919 USP17L23D6RBM5 183 aa9.64□□□□□ -0.87
RAPGEF3-218ENST00000548919 TMEM256-PLSCR3K7ERE1 68 aa9.63□□□□□ -0.87
RAPGEF3-218ENST00000548919 NDUFC2O95298 119 aa9.63□□□□□ -0.87
RAPGEF3-218ENST00000548919 SMR3AQ99954 134 aa9.63□□□□□ -0.87
RAPGEF3-218ENST00000548919 COX17Q14061 63 aa9.63□□□□□ -0.87
RAPGEF3-218ENST00000548919 JMJD7-PLA2G4BH0Y9G9 81 aa9.63□□□□□ -0.87
RAPGEF3-218ENST00000548919 S100A7L2Q5SY68 101 aa9.63□□□□□ -0.87
RAPGEF3-218ENST00000548919 UNQ6190/PRO20217Q6UXQ8 127 aa9.63□□□□□ -0.87
RAPGEF3-218ENST00000548919 SERP2Q8N6R1 65 aa9.61□□□□□ -0.87
RAPGEF3-218ENST00000548919 IGHV4-28A0A0C4DH34 117 aa9.61□□□□□ -0.87
RAPGEF3-218ENST00000548919 FAM19A1Q7Z5A9 133 aa9.61□□□□□ -0.87
RAPGEF3-218ENST00000548919 UNC79Q9P2D8 2635 aa9.61□□□□□ -0.87
RAPGEF3-218ENST00000548919 FASNP49327 2511 aaKnown RBP9.6□□□□□ -0.87
RAPGEF3-218ENST00000548919 TRRAPQ9Y4A5 3859 aa9.6□□□□□ -0.87
RAPGEF3-218ENST00000548919 CELA1Q9UNI1 258 aa9.6□□□□□ -0.87
RAPGEF3-218ENST00000548919 SMIM9A6NGZ8 99 aa9.6□□□□□ -0.87
RAPGEF3-218ENST00000548919 HTN3P15516 51 aa9.6□□□□□ -0.87
RAPGEF3-218ENST00000548919 ENHOQ6UWT2 76 aa9.6□□□□□ -0.87
RAPGEF3-218ENST00000548919 HIVEP1P15822 2718 aa9.59□□□□□ -0.87
RAPGEF3-218ENST00000548919 TRAV23DV6A0A075B6W5 121 aa9.59□□□□□ -0.87
RAPGEF3-218ENST00000548919 LINC00575Q6W349 94 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms