RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 LBHQ53QV2 105 aaPredicted RBP12.11□□□□□ -0.47
SSH1-207ENST00000547862 ANAPC16Q96DE5 110 aa12.11□□□□□ -0.47
SSH1-207ENST00000547862 F8VRH5 84 aa12.1□□□□□ -0.47
SSH1-207ENST00000547862 PNRC1Q12796 327 aaPredicted RBP12.1□□□□□ -0.47
SSH1-207ENST00000547862 MRPL55Q7Z7F7 128 aaKnown RBP12.1□□□□□ -0.47
SSH1-207ENST00000547862 NXT2Q9NPJ8 142 aaKnown RBP12.1□□□□□ -0.47
SSH1-207ENST00000547862 CARHSP1Q9Y2V2 147 aaKnown RBP12.1□□□□□ -0.47
SSH1-207ENST00000547862 FAM19A3Q7Z5A8 133 aa12.09□□□□□ -0.47
SSH1-207ENST00000547862 NPSP0C0P6 89 aa12.08□□□□□ -0.48
SSH1-207ENST00000547862 SEC11AP67812 179 aa12.08□□□□□ -0.48
SSH1-207ENST00000547862 PAPPA-AS1Q5QFB9 102 aa12.08□□□□□ -0.48
SSH1-207ENST00000547862 GAGE10A6NGK3 116 aa12.07□□□□□ -0.48
SSH1-207ENST00000547862 RPL37AP8A6NKH3 93 aa12.07□□□□□ -0.48
SSH1-207ENST00000547862 KIAA1644Q3SXP7 199 aa12.07□□□□□ -0.48
SSH1-207ENST00000547862 A0A087X002 238 aa12.06□□□□□ -0.48
SSH1-207ENST00000547862 K7EMI3 77 aa12.06□□□□□ -0.48
SSH1-207ENST00000547862 CXCL5P42830 114 aa12.06□□□□□ -0.48
SSH1-207ENST00000547862 RPL28P46779 137 aaKnown RBP12.06□□□□□ -0.48
SSH1-207ENST00000547862 TIMM17AQ99595 171 aa12.06□□□□□ -0.48
SSH1-207ENST00000547862 SMIM1B2RUZ4 78 aa12.05□□□□□ -0.48
SSH1-207ENST00000547862 BCE1O60756 84 aa12.05□□□□□ -0.48
SSH1-207ENST00000547862 TOMM6Q96B49 74 aa12.05□□□□□ -0.48
SSH1-207ENST00000547862 TP73-AS1Q9UF72 201 aa12.05□□□□□ -0.48
SSH1-207ENST00000547862 COX7B2Q8TF08 81 aa12.04□□□□□ -0.48
SSH1-207ENST00000547862 SCGB3A1Q96QR1 104 aa12.04□□□□□ -0.48
SSH1-207ENST00000547862 TYMSOSQ8TAI1 123 aa12.03□□□□□ -0.48
SSH1-207ENST00000547862 LINC00167Q96N53 147 aa12.03□□□□□ -0.48
SSH1-207ENST00000547862 SPINK8P0C7L1 97 aa12.02□□□□□ -0.49
SSH1-207ENST00000547862 G0S2P27469 103 aa12.02□□□□□ -0.49
SSH1-207ENST00000547862 RAB5BP61020 215 aa12.02□□□□□ -0.49
SSH1-207ENST00000547862 ANAPC11Q9NYG5 84 aa12.02□□□□□ -0.49
SSH1-207ENST00000547862 ADCYAP1P18509 176 aa12.01□□□□□ -0.49
SSH1-207ENST00000547862 CRYGAP11844 174 aa12□□□□□ -0.49
SSH1-207ENST00000547862 RAB14P61106 215 aa12□□□□□ -0.49
SSH1-207ENST00000547862 ERASQ7Z444 233 aa12□□□□□ -0.49
SSH1-207ENST00000547862 UBE2AP49459 152 aa11.99□□□□□ -0.49
SSH1-207ENST00000547862 PDZD11Q5EBL8 140 aa11.99□□□□□ -0.49
SSH1-207ENST00000547862 NKAPP1Q8N9T2 125 aa11.99□□□□□ -0.49
SSH1-207ENST00000547862 TINCRA0A1B0GVN0 87 aa11.98□□□□□ -0.49
SSH1-207ENST00000547862 SCO1O75880 301 aa11.98□□□□□ -0.49
SSH1-207ENST00000547862 IGKV2-28A0A075B6P5 120 aa11.95□□□□□ -0.5
SSH1-207ENST00000547862 IGKV2D-28P01615 120 aa11.95□□□□□ -0.5
SSH1-207ENST00000547862 RETNLBQ9BQ08 111 aa11.95□□□□□ -0.5
SSH1-207ENST00000547862 IGLV5-45A0A087WSX0 123 aa11.94□□□□□ -0.5
SSH1-207ENST00000547862 A0A0U1RQV1 116 aa11.94□□□□□ -0.5
SSH1-207ENST00000547862 CST9LQ9H4G1 147 aa11.94□□□□□ -0.5
SSH1-207ENST00000547862 KRTAP13-2Q52LG2 175 aa11.93□□□□□ -0.5
SSH1-207ENST00000547862 IGLV5-37A0A075B6J1 123 aa11.92□□□□□ -0.5
SSH1-207ENST00000547862 ATP5LO75964 103 aa11.92□□□□□ -0.5
SSH1-207ENST00000547862 PFN2P35080 140 aa11.92□□□□□ -0.5
SSH1-207ENST00000547862 PRLHP81277 87 aa11.91□□□□□ -0.5
SSH1-207ENST00000547862 PMVKQ15126 192 aa11.91□□□□□ -0.5
SSH1-207ENST00000547862 FA2HQ7L5A8 372 aa11.91□□□□□ -0.5
SSH1-207ENST00000547862 SMCO4Q9NRQ5 59 aa11.91□□□□□ -0.5
SSH1-207ENST00000547862 MUC2Q02817 5179 aa11.91□□□□□ -0.5
SSH1-207ENST00000547862 H3BRM9 83 aa11.9□□□□□ -0.5
SSH1-207ENST00000547862 KRTAP13-1Q8IUC0 172 aa11.9□□□□□ -0.5
SSH1-207ENST00000547862 NDUFA6P56556 154 aa11.89□□□□□ -0.51
SSH1-207ENST00000547862 LINC00304Q8N9R0 145 aa11.89□□□□□ -0.51
SSH1-207ENST00000547862 TRAV9-1A0A075B6T8 112 aa11.88□□□□□ -0.51
SSH1-207ENST00000547862 S100PP25815 95 aa11.88□□□□□ -0.51
SSH1-207ENST00000547862 LINC01549A6NIU2 74 aa11.87□□□□□ -0.51
SSH1-207ENST00000547862 FAM19A1Q7Z5A9 133 aa11.87□□□□□ -0.51
SSH1-207ENST00000547862 MRPL18Q9H0U6 180 aaKnown RBP11.87□□□□□ -0.51
SSH1-207ENST00000547862 LINC01546A6NGU7 62 aa11.86□□□□□ -0.51
SSH1-207ENST00000547862 TMEM238C9JI98 176 aa11.86□□□□□ -0.51
SSH1-207ENST00000547862 GNB1LQ9BYB4 327 aa11.86□□□□□ -0.51
SSH1-207ENST00000547862 IGKV2D-26A0A0A0MRZ7 120 aa11.85□□□□□ -0.51
SSH1-207ENST00000547862 CLLU1Q5K131 121 aa11.85□□□□□ -0.51
SSH1-207ENST00000547862 ZNF625Q96I27 306 aaPredicted RBP11.85□□□□□ -0.51
SSH1-207ENST00000547862 FABP9Q0Z7S8 132 aa11.84□□□□□ -0.51
SSH1-207ENST00000547862 FAM229BQ4G0N7 80 aa11.84□□□□□ -0.51
SSH1-207ENST00000547862 IGLC3P0DOY3 106 aa11.83□□□□□ -0.52
SSH1-207ENST00000547862 VPREB1P12018 145 aa11.83□□□□□ -0.52
SSH1-207ENST00000547862 TMEM126AQ9H061 195 aa11.83□□□□□ -0.52
SSH1-207ENST00000547862 SND1-IT1Q9HBX3 110 aa11.83□□□□□ -0.52
SSH1-207ENST00000547862 ERG28Q9UKR5 140 aa11.83□□□□□ -0.52
SSH1-207ENST00000547862 TMEM218A2RU14 115 aa11.82□□□□□ -0.52
SSH1-207ENST00000547862 ZNF22P17026 224 aaPredicted RBP11.82□□□□□ -0.52
SSH1-207ENST00000547862 IGLV5-39A0A0G2JS06 123 aa11.81□□□□□ -0.52
SSH1-207ENST00000547862 UQCC3Q6UW78 93 aa11.8□□□□□ -0.52
SSH1-207ENST00000547862 CDIP1Q9H305 208 aa11.8□□□□□ -0.52
SSH1-207ENST00000547862 PMCHL1Q16048 86 aa11.79□□□□□ -0.52
SSH1-207ENST00000547862 C3orf22Q8N5N4 141 aa11.79□□□□□ -0.52
SSH1-207ENST00000547862 Q8NDZ9 215 aa11.79□□□□□ -0.52
SSH1-207ENST00000547862 A0A096LNJ9 63 aa11.78□□□□□ -0.52
SSH1-207ENST00000547862 M0R378 163 aa11.78□□□□□ -0.52
SSH1-207ENST00000547862 RPL24P83731 157 aaKnown RBP11.78□□□□□ -0.52
SSH1-207ENST00000547862 IGLV7-46A0A075B6I9 117 aa11.77□□□□□ -0.53
SSH1-207ENST00000547862 COX19Q49B96 90 aa11.77□□□□□ -0.53
SSH1-207ENST00000547862 CBLN2Q8IUK8 224 aa11.77□□□□□ -0.53
SSH1-207ENST00000547862 HIGD2AQ9BW72 106 aa11.77□□□□□ -0.53
SSH1-207ENST00000547862 TMEM170BQ5T4T1 132 aa11.76□□□□□ -0.53
SSH1-207ENST00000547862 SEC11CQ9BY50 192 aa11.76□□□□□ -0.53
SSH1-207ENST00000547862 KRTAP9-2Q9BYQ4 174 aa11.76□□□□□ -0.53
SSH1-207ENST00000547862 C11orf86A6NJI1 115 aa11.75□□□□□ -0.53
SSH1-207ENST00000547862 A0A0U1RRA0 63 aa11.74□□□□□ -0.53
SSH1-207ENST00000547862 HBDP02042 147 aa11.74□□□□□ -0.53
SSH1-207ENST00000547862 TPRXLQ17RH7 258 aa11.74□□□□□ -0.53
SSH1-207ENST00000547862 RPS10P5Q9NQ39 176 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms