RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 SCN7AQ01118 1682 aa-0.77□□□□□ -2.53
CCDC38-204ENST00000546816 SYS1-DBNDD2H3BUS1 97 aa-0.77□□□□□ -2.53
CCDC38-204ENST00000546816 LINC00846Q9NV44 126 aa-0.77□□□□□ -2.53
CCDC38-204ENST00000546816 EFCAB10A6NFE3 127 aa-0.78□□□□□ -2.53
CCDC38-204ENST00000546816 NAP1L6A6NFF2 107 aa-0.78□□□□□ -2.53
CCDC38-204ENST00000546816 DLEU1O43261 78 aa-0.78□□□□□ -2.53
CCDC38-204ENST00000546816 TRAPPC2P0DI81 140 aa-0.78□□□□□ -2.53
CCDC38-204ENST00000546816 TRAPPC2BP0DI82 140 aa-0.78□□□□□ -2.53
CCDC38-204ENST00000546816 SPRR2AP35326 72 aa-0.78□□□□□ -2.53
CCDC38-204ENST00000546816 SFTA2Q6UW10 78 aa-0.78□□□□□ -2.53
CCDC38-204ENST00000546816 FAT1Q14517 4588 aa-0.78□□□□□ -2.53
CCDC38-204ENST00000546816 A0A0G2JMZ2 1700 aa-0.78□□□□□ -2.53
CCDC38-204ENST00000546816 TCHHQ07283 1943 aa-0.79□□□□□ -2.54
CCDC38-204ENST00000546816 RYR3Q15413 4870 aa-0.79□□□□□ -2.54
CCDC38-204ENST00000546816 A0A1B0GV90 55 aa-0.79□□□□□ -2.54
CCDC38-204ENST00000546816 SAA2P0DJI9 122 aaPredicted RBP-0.79□□□□□ -2.54
CCDC38-204ENST00000546816 GNG4P50150 75 aa-0.79□□□□□ -2.54
CCDC38-204ENST00000546816 KRTAP6-2Q3LI66 62 aa-0.79□□□□□ -2.54
CCDC38-204ENST00000546816 SVBPQ8N300 66 aa-0.79□□□□□ -2.54
CCDC38-204ENST00000546816 XRN1Q8IZH2 1706 aaKnown RBP-0.79□□□□□ -2.54
CCDC38-204ENST00000546816 PLEKHH2Q8IVE3 1493 aa-0.8□□□□□ -2.54
CCDC38-204ENST00000546816 DOPEY1Q5JWR5 2465 aa-0.8□□□□□ -2.54
CCDC38-204ENST00000546816 CPSF4LA6NMK7 179 aaKnown RBP-0.8□□□□□ -2.54
CCDC38-204ENST00000546816 H3BQ15 152 aa-0.8□□□□□ -2.54
CCDC38-204ENST00000546816 CORTO00230 105 aa-0.8□□□□□ -2.54
CCDC38-204ENST00000546816 PPP3R1P63098 170 aa-0.8□□□□□ -2.54
CCDC38-204ENST00000546816 C12orf57Q99622 126 aa-0.8□□□□□ -2.54
CCDC38-204ENST00000546816 APLNQ9ULZ1 77 aa-0.8□□□□□ -2.54
CCDC38-204ENST00000546816 NLRP1Q9C000 1473 aa-0.8□□□□□ -2.54
CCDC38-204ENST00000546816 LAMA5O15230 3695 aa-0.8□□□□□ -2.54
CCDC38-204ENST00000546816 FMN2Q9NZ56 1722 aa-0.81□□□□□ -2.54
CCDC38-204ENST00000546816 PCNX1Q96RV3 2341 aa-0.81□□□□□ -2.54
CCDC38-204ENST00000546816 TOP2BQ02880 1626 aa-0.81□□□□□ -2.54
CCDC38-204ENST00000546816 SEC11AP67812 179 aa-0.81□□□□□ -2.54
CCDC38-204ENST00000546816 ARHGAP5Q13017 1502 aa-0.81□□□□□ -2.54
CCDC38-204ENST00000546816 NUP188Q5SRE5 1749 aa-0.81□□□□□ -2.54
CCDC38-204ENST00000546816 NRKQ7Z2Y5 1582 aa-0.82□□□□□ -2.54
CCDC38-204ENST00000546816 KRTAP19-8Q3LI54 63 aa-0.82□□□□□ -2.54
CCDC38-204ENST00000546816 MAPKBP1O60336 1514 aa-0.83□□□□□ -2.54
CCDC38-204ENST00000546816 COL4A6Q14031 1691 aa-0.83□□□□□ -2.54
CCDC38-204ENST00000546816 NKTRP30414 1462 aaKnown RBP-0.83□□□□□ -2.54
CCDC38-204ENST00000546816 CRYM-AS1A6NIL9 109 aa-0.83□□□□□ -2.54
CCDC38-204ENST00000546816 KRTAP20-2Q3LI61 65 aa-0.83□□□□□ -2.54
CCDC38-204ENST00000546816 SETD2Q9BYW2 2564 aaPredicted RBP-0.83□□□□□ -2.54
CCDC38-204ENST00000546816 PZPP20742 1482 aa-0.84□□□□□ -2.54
CCDC38-204ENST00000546816 CCDC141Q6ZP82 1450 aa-0.84□□□□□ -2.54
CCDC38-204ENST00000546816 A0A1B0GU69 56 aa-0.84□□□□□ -2.54
CCDC38-204ENST00000546816 CGREF1Q99674 301 aa-0.84□□□□□ -2.54
CCDC38-204ENST00000546816 SPHKAPQ2M3C7 1700 aa-0.84□□□□□ -2.54
CCDC38-204ENST00000546816 TGP01266 2768 aa-0.85□□□□□ -2.54
CCDC38-204ENST00000546816 PAPPA2Q9BXP8 1791 aa-0.85□□□□□ -2.55
CCDC38-204ENST00000546816 A0A087WVE0 104 aa-0.85□□□□□ -2.55
CCDC38-204ENST00000546816 SNCAP37840 140 aa-0.85□□□□□ -2.55
CCDC38-204ENST00000546816 DEFB135Q30KP9 77 aa-0.85□□□□□ -2.55
CCDC38-204ENST00000546816 H1FX-AS1Q4G0G2 97 aa-0.85□□□□□ -2.55
CCDC38-204ENST00000546816 C2orf88Q9BSF0 95 aa-0.85□□□□□ -2.55
CCDC38-204ENST00000546816 CRIPTQ9P021 101 aa-0.85□□□□□ -2.55
CCDC38-204ENST00000546816 HERC2O95714 4834 aa-0.85□□□□□ -2.55
CCDC38-204ENST00000546816 MARF1Q9Y4F3 1742 aaKnown RBP-0.86□□□□□ -2.55
CCDC38-204ENST00000546816 EIF4G3O43432 1585 aaKnown RBP-0.86□□□□□ -2.55
CCDC38-204ENST00000546816 EDC4Q6P2E9 1401 aaKnown RBP-0.86□□□□□ -2.55
CCDC38-204ENST00000546816 SPRR2EP22531 72 aa-0.86□□□□□ -2.55
CCDC38-204ENST00000546816 S100A1P23297 94 aa-0.86□□□□□ -2.55
CCDC38-204ENST00000546816 KRTDAPP60985 99 aa-0.86□□□□□ -2.55
CCDC38-204ENST00000546816 C6orf201Q7Z4U5 140 aa-0.86□□□□□ -2.55
CCDC38-204ENST00000546816 hADV29S1A0JD25 119 aa-0.87□□□□□ -2.55
CCDC38-204ENST00000546816 C7orf77A4D0Y5 90 aa-0.87□□□□□ -2.55
CCDC38-204ENST00000546816 CC2D2AQ9P2K1 1620 aa-0.87□□□□□ -2.55
CCDC38-204ENST00000546816 HYDINQ4G0P3 5121 aa-0.87□□□□□ -2.55
CCDC38-204ENST00000546816 SLIT1O75093 1534 aa-0.88□□□□□ -2.55
CCDC38-204ENST00000546816 TMEM262E9PQX1 116 aa-0.88□□□□□ -2.55
CCDC38-204ENST00000546816 I3L3M4 83 aa-0.88□□□□□ -2.55
CCDC38-204ENST00000546816 HSD52Q0P140 79 aa-0.88□□□□□ -2.55
CCDC38-204ENST00000546816 TMEM203Q969S6 136 aa-0.88□□□□□ -2.55
CCDC38-204ENST00000546816 GNG8Q9UK08 70 aa-0.88□□□□□ -2.55
CCDC38-204ENST00000546816 ABCC5O15440 1437 aa-0.89□□□□□ -2.55
CCDC38-204ENST00000546816 CHD1O14646 1710 aa-0.89□□□□□ -2.55
CCDC38-204ENST00000546816 H3BQF6 201 aa-0.89□□□□□ -2.55
CCDC38-204ENST00000546816 C9orf62Q8N4C0 152 aa-0.89□□□□□ -2.55
CCDC38-204ENST00000546816 RYR1P21817 5038 aa-0.9□□□□□ -2.55
CCDC38-204ENST00000546816 TOPAZ1Q8N9V7 1692 aa-0.9□□□□□ -2.55
CCDC38-204ENST00000546816 PKD1P98161 4303 aa-0.9□□□□□ -2.55
CCDC38-204ENST00000546816 A0A0G2JND7 137 aa-0.9□□□□□ -2.55
CCDC38-204ENST00000546816 LINC00587B1AMM8 73 aa-0.9□□□□□ -2.55
CCDC38-204ENST00000546816 H0Y9P7 68 aa-0.9□□□□□ -2.55
CCDC38-204ENST00000546816 MT4P47944 62 aa-0.9□□□□□ -2.55
CCDC38-204ENST00000546816 MRPS10P82664 201 aaKnown RBP-0.9□□□□□ -2.55
CCDC38-204ENST00000546816 VAMP8Q9BV40 100 aa-0.9□□□□□ -2.55
CCDC38-204ENST00000546816 CACFD1Q9UGQ2 172 aa-0.9□□□□□ -2.55
CCDC38-204ENST00000546816 TRBV25-1A0A075B6N4 114 aa-0.91□□□□□ -2.56
CCDC38-204ENST00000546816 DEFB107AQ8IZN7 70 aa-0.91□□□□□ -2.56
CCDC38-204ENST00000546816 TARBP1Q13395 1621 aaKnown RBP-0.92□□□□□ -2.56
CCDC38-204ENST00000546816 PDCD11Q14690 1871 aaKnown RBP-0.92□□□□□ -2.56
CCDC38-204ENST00000546816 ASIPP42127 132 aa-0.92□□□□□ -2.56
CCDC38-204ENST00000546816 GTF2H5Q6ZYL4 71 aa-0.92□□□□□ -2.56
CCDC38-204ENST00000546816 MXRA5Q9NR99 2828 aa-0.92□□□□□ -2.56
CCDC38-204ENST00000546816 LRRC37AA6NMS7 1700 aa-0.92□□□□□ -2.56
CCDC38-204ENST00000546816 USH2AO75445 5202 aa-0.92□□□□□ -2.56
CCDC38-204ENST00000546816 DNAH6Q9C0G6 4158 aa-0.93□□□□□ -2.56
CCDC38-204ENST00000546816 NDUFC1O43677 76 aa-0.93□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms