RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 A0A096LNI7 61 aa8.67□□□□□ -1.02
NPC1L1-204ENST00000546276 A0A1B0GUV1 79 aa8.66□□□□□ -1.02
NPC1L1-204ENST00000546276 EGFEM1PQ0D2K5 195 aa8.66□□□□□ -1.02
NPC1L1-204ENST00000546276 Q8N2B8 174 aa8.66□□□□□ -1.02
NPC1L1-204ENST00000546276 ZNF843Q8N446 348 aa8.66□□□□□ -1.02
NPC1L1-204ENST00000546276 IGKV4-1P06312 121 aa8.66□□□□□ -1.02
NPC1L1-204ENST00000546276 V9GYY9 64 aa8.66□□□□□ -1.02
NPC1L1-204ENST00000546276 SPTSSBQ8NFR3 76 aa8.65□□□□□ -1.02
NPC1L1-204ENST00000546276 IGLV5-45A0A087WSX0 123 aa8.65□□□□□ -1.02
NPC1L1-204ENST00000546276 INAFM1C9JVW0 142 aa8.65□□□□□ -1.03
NPC1L1-204ENST00000546276 Q8N3U1 123 aa8.65□□□□□ -1.03
NPC1L1-204ENST00000546276 WFDC13Q8IUB5 93 aa8.64□□□□□ -1.03
NPC1L1-204ENST00000546276 TLN2Q9Y4G6 2542 aa8.64□□□□□ -1.03
NPC1L1-204ENST00000546276 LINC01561Q8N1V8 128 aa8.64□□□□□ -1.03
NPC1L1-204ENST00000546276 PRRC2CQ9Y520 2896 aaKnown RBP8.64□□□□□ -1.03
NPC1L1-204ENST00000546276 SHISA2Q6UWI4 295 aa8.64□□□□□ -1.03
NPC1L1-204ENST00000546276 LOC107984640A0A0U1RRK4 108 aa8.64□□□□□ -1.03
NPC1L1-204ENST00000546276 SETD2Q9BYW2 2564 aaPredicted RBP8.63□□□□□ -1.03
NPC1L1-204ENST00000546276 RPL37AP8A6NKH3 93 aa8.63□□□□□ -1.03
NPC1L1-204ENST00000546276 FAM30AQ9NZY2 134 aa8.63□□□□□ -1.03
NPC1L1-204ENST00000546276 USP9YO00507 2555 aaPredicted RBP8.63□□□□□ -1.03
NPC1L1-204ENST00000546276 A0A0C4DFX4 3053 aa8.63□□□□□ -1.03
NPC1L1-204ENST00000546276 LINC00575Q6W349 94 aa8.63□□□□□ -1.03
NPC1L1-204ENST00000546276 PRR4Q16378 134 aa8.62□□□□□ -1.03
NPC1L1-204ENST00000546276 CELA1Q9UNI1 258 aa8.62□□□□□ -1.03
NPC1L1-204ENST00000546276 Q6ZVQ6 151 aa8.61□□□□□ -1.03
NPC1L1-204ENST00000546276 IGHV3OR16-9A0A0B4J2B5 98 aa8.61□□□□□ -1.03
NPC1L1-204ENST00000546276 KLK9Q2XQG4 91 aa8.61□□□□□ -1.03
NPC1L1-204ENST00000546276 SOSTDC1Q6X4U4 206 aa8.61□□□□□ -1.03
NPC1L1-204ENST00000546276 KRTAP10-9P60411 292 aa8.61□□□□□ -1.03
NPC1L1-204ENST00000546276 PPDPFQ9H3Y8 114 aa8.61□□□□□ -1.03
NPC1L1-204ENST00000546276 TRAV10A0A0B4J240 114 aa8.6□□□□□ -1.03
NPC1L1-204ENST00000546276 CRYGAP11844 174 aa8.6□□□□□ -1.03
NPC1L1-204ENST00000546276 PCSK5Q92824 1860 aa8.6□□□□□ -1.03
NPC1L1-204ENST00000546276 C6orf223Q8N319 242 aa8.6□□□□□ -1.03
NPC1L1-204ENST00000546276 FAM218AQ96MZ4 157 aa8.6□□□□□ -1.03
NPC1L1-204ENST00000546276 LINC01547P58512 204 aaPredicted RBP8.59□□□□□ -1.03
NPC1L1-204ENST00000546276 PRYO14603 147 aa8.59□□□□□ -1.03
NPC1L1-204ENST00000546276 LY6G6DO95868 133 aa8.59□□□□□ -1.03
NPC1L1-204ENST00000546276 Q9UF83 564 aa8.59□□□□□ -1.03
NPC1L1-204ENST00000546276 ABCA12Q86UK0 2595 aa8.59□□□□□ -1.03
NPC1L1-204ENST00000546276 C1orf137Q5JT78 98 aa8.59□□□□□ -1.04
NPC1L1-204ENST00000546276 SVIPQ8NHG7 77 aa8.58□□□□□ -1.04
NPC1L1-204ENST00000546276 FN1P02751 2386 aaKnown RBP8.58□□□□□ -1.04
NPC1L1-204ENST00000546276 IGHV4-30-4P0DP06 118 aa8.58□□□□□ -1.04
NPC1L1-204ENST00000546276 A8MTW9 85 aa8.58□□□□□ -1.04
NPC1L1-204ENST00000546276 MRPL55Q7Z7F7 128 aaKnown RBP8.58□□□□□ -1.04
NPC1L1-204ENST00000546276 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.57□□□□□ -1.04
NPC1L1-204ENST00000546276 PLA2G2AP14555 144 aa8.57□□□□□ -1.04
NPC1L1-204ENST00000546276 LITAFQ99732 161 aa8.57□□□□□ -1.04
NPC1L1-204ENST00000546276 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.57□□□□□ -1.04
NPC1L1-204ENST00000546276 ZFYVE26Q68DK2 2539 aa8.57□□□□□ -1.04
NPC1L1-204ENST00000546276 FASNP49327 2511 aaKnown RBP8.56□□□□□ -1.04
NPC1L1-204ENST00000546276 C1orf195Q5TG92 126 aa8.56□□□□□ -1.04
NPC1L1-204ENST00000546276 C16orf95Q9H693 158 aa8.56□□□□□ -1.04
NPC1L1-204ENST00000546276 TMEM254Q8TBM7 123 aa8.55□□□□□ -1.04
NPC1L1-204ENST00000546276 COL27A1Q8IZC6 1860 aaPredicted RBP8.55□□□□□ -1.04
NPC1L1-204ENST00000546276 CXCL6P80162 114 aa8.55□□□□□ -1.04
NPC1L1-204ENST00000546276 EPG5Q9HCE0 2579 aa8.55□□□□□ -1.04
NPC1L1-204ENST00000546276 A0A0J9YWU9 116 aa8.54□□□□□ -1.04
NPC1L1-204ENST00000546276 LRRK2Q5S007 2527 aa8.54□□□□□ -1.04
NPC1L1-204ENST00000546276 NANOS2P60321 138 aaKnown RBP8.54□□□□□ -1.04
NPC1L1-204ENST00000546276 C4orf48Q5BLP8 95 aa8.53□□□□□ -1.04
NPC1L1-204ENST00000546276 C2orf48Q96LS8 159 aa8.52□□□□□ -1.05
NPC1L1-204ENST00000546276 A6NED7 52 aa8.52□□□□□ -1.05
NPC1L1-204ENST00000546276 FHL3Q13643 280 aa8.52□□□□□ -1.05
NPC1L1-204ENST00000546276 LRCOL1A6NCL2 159 aa8.52□□□□□ -1.05
NPC1L1-204ENST00000546276 RPS28P62857 69 aaKnown RBP8.51□□□□□ -1.05
NPC1L1-204ENST00000546276 F8WDY8 70 aa8.51□□□□□ -1.05
NPC1L1-204ENST00000546276 ZNF462Q96JM2 2506 aa8.51□□□□□ -1.05
NPC1L1-204ENST00000546276 LINC00208Q96KT6 92 aa8.51□□□□□ -1.05
NPC1L1-204ENST00000546276 BCE1O60756 84 aa8.5□□□□□ -1.05
NPC1L1-204ENST00000546276 LYPD5Q6UWN5 251 aa8.5□□□□□ -1.05
NPC1L1-204ENST00000546276 SEC61GP60059 68 aa8.5□□□□□ -1.05
NPC1L1-204ENST00000546276 TRBV7-6A0A0J9YX20 115 aa8.49□□□□□ -1.05
NPC1L1-204ENST00000546276 REG3GQ6UW15 175 aa8.49□□□□□ -1.05
NPC1L1-204ENST00000546276 OXLD1Q5BKU9 147 aa8.49□□□□□ -1.05
NPC1L1-204ENST00000546276 SPATA3Q8NHX4 192 aa8.49□□□□□ -1.05
NPC1L1-204ENST00000546276 PKD1L2Q7Z442 2459 aa8.49□□□□□ -1.05
NPC1L1-204ENST00000546276 PLAC8L1A1L4L8 177 aa8.49□□□□□ -1.05
NPC1L1-204ENST00000546276 RETNQ9HD89 108 aa8.49□□□□□ -1.05
NPC1L1-204ENST00000546276 JMJD1CQ15652 2540 aa8.48□□□□□ -1.05
NPC1L1-204ENST00000546276 Q6ZRU5 148 aa8.48□□□□□ -1.05
NPC1L1-204ENST00000546276 Q6ZTC4 211 aa8.48□□□□□ -1.05
NPC1L1-204ENST00000546276 Q8N9L7 120 aa8.48□□□□□ -1.05
NPC1L1-204ENST00000546276 DOPEY1Q5JWR5 2465 aa8.48□□□□□ -1.05
NPC1L1-204ENST00000546276 IL17DQ8TAD2 202 aa8.47□□□□□ -1.05
NPC1L1-204ENST00000546276 ZNF706Q9Y5V0 76 aaPredicted RBP8.47□□□□□ -1.05
NPC1L1-204ENST00000546276 C10orf25Q5T742 122 aa8.47□□□□□ -1.05
NPC1L1-204ENST00000546276 CASC2Q6XLA1 102 aa8.47□□□□□ -1.05
NPC1L1-204ENST00000546276 SMR3AQ99954 134 aa8.47□□□□□ -1.05
NPC1L1-204ENST00000546276 MUC4Q99102 2169 aa8.46□□□□□ -1.05
NPC1L1-204ENST00000546276 SMCR5Q8TEV8 140 aa8.46□□□□□ -1.06
NPC1L1-204ENST00000546276 SPINK6Q6UWN8 80 aa8.45□□□□□ -1.06
NPC1L1-204ENST00000546276 PRR15LQ9BU68 103 aa8.45□□□□□ -1.06
NPC1L1-204ENST00000546276 IGLV9-49A0A0B4J1Y8 123 aa8.45□□□□□ -1.06
NPC1L1-204ENST00000546276 Q6ZQT0 140 aa8.45□□□□□ -1.06
NPC1L1-204ENST00000546276 ESRGQ1W209 222 aa8.44□□□□□ -1.06
NPC1L1-204ENST00000546276 LOC110117498A0A087WWA1 95 aa8.43□□□□□ -1.06
NPC1L1-204ENST00000546276 A0A087WSZ3 146 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms