RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 DIRC1Q969H9 104 aa12.8□□□□□ -0.36
SCARB1-210ENST00000545493 CKS1BP61024 79 aa12.79□□□□□ -0.36
SCARB1-210ENST00000545493 UBE2BP63146 152 aa12.79□□□□□ -0.36
SCARB1-210ENST00000545493 SEC11AP67812 179 aa12.78□□□□□ -0.36
SCARB1-210ENST00000545493 LINC00469Q8N7U9 141 aa12.78□□□□□ -0.36
SCARB1-210ENST00000545493 ALKBH7Q9BT30 221 aaPredicted RBP12.78□□□□□ -0.36
SCARB1-210ENST00000545493 SEC11CQ9BY50 192 aa12.78□□□□□ -0.36
SCARB1-210ENST00000545493 LINC01546A6NGU7 62 aa12.77□□□□□ -0.37
SCARB1-210ENST00000545493 G0S2P27469 103 aa12.77□□□□□ -0.37
SCARB1-210ENST00000545493 C6orf226Q5I0X4 101 aa12.77□□□□□ -0.37
SCARB1-210ENST00000545493 GEMIN7Q9H840 131 aaKnown RBP12.77□□□□□ -0.37
SCARB1-210ENST00000545493 SMIM1B2RUZ4 78 aa12.76□□□□□ -0.37
SCARB1-210ENST00000545493 ERASQ7Z444 233 aa12.76□□□□□ -0.37
SCARB1-210ENST00000545493 PRR26Q8N8Z3 221 aa12.76□□□□□ -0.37
SCARB1-210ENST00000545493 SCGB3A1Q96QR1 104 aa12.76□□□□□ -0.37
SCARB1-210ENST00000545493 GNB1LQ9BYB4 327 aa12.76□□□□□ -0.37
SCARB1-210ENST00000545493 F8VRH5 84 aa12.75□□□□□ -0.37
SCARB1-210ENST00000545493 KRTAP1-4P0C5Y4 121 aa12.75□□□□□ -0.37
SCARB1-210ENST00000545493 XAGE1AQ9HD64 81 aa12.75□□□□□ -0.37
SCARB1-210ENST00000545493 IGLV5-45A0A087WSX0 123 aa12.74□□□□□ -0.37
SCARB1-210ENST00000545493 S100PP25815 95 aa12.74□□□□□ -0.37
SCARB1-210ENST00000545493 COMMD7Q86VX2 200 aa12.73□□□□□ -0.37
SCARB1-210ENST00000545493 TINCRA0A1B0GVN0 87 aa12.72□□□□□ -0.37
SCARB1-210ENST00000545493 CXCL5P42830 114 aa12.72□□□□□ -0.37
SCARB1-210ENST00000545493 C22orf24Q9Y442 160 aa12.72□□□□□ -0.37
SCARB1-210ENST00000545493 MRPL18Q9H0U6 180 aaKnown RBP12.7□□□□□ -0.38
SCARB1-210ENST00000545493 PDZD11Q5EBL8 140 aa12.69□□□□□ -0.38
SCARB1-210ENST00000545493 C10orf91Q5T1B1 145 aa12.69□□□□□ -0.38
SCARB1-210ENST00000545493 COX7B2Q8TF08 81 aa12.69□□□□□ -0.38
SCARB1-210ENST00000545493 CST9LQ9H4G1 147 aa12.69□□□□□ -0.38
SCARB1-210ENST00000545493 LINC01549A6NIU2 74 aa12.68□□□□□ -0.38
SCARB1-210ENST00000545493 COX19Q49B96 90 aa12.68□□□□□ -0.38
SCARB1-210ENST00000545493 IGLV1-50A0A075B6I6 118 aa12.67□□□□□ -0.38
SCARB1-210ENST00000545493 SPINK8P0C7L1 97 aa12.67□□□□□ -0.38
SCARB1-210ENST00000545493 RHEBQ15382 184 aa12.67□□□□□ -0.38
SCARB1-210ENST00000545493 FA2HQ7L5A8 372 aa12.67□□□□□ -0.38
SCARB1-210ENST00000545493 CARHSP1Q9Y2V2 147 aaKnown RBP12.67□□□□□ -0.38
SCARB1-210ENST00000545493 NUPR1O60356 82 aa12.66□□□□□ -0.38
SCARB1-210ENST00000545493 FABP9Q0Z7S8 132 aa12.66□□□□□ -0.38
SCARB1-210ENST00000545493 PMVKQ15126 192 aa12.66□□□□□ -0.38
SCARB1-210ENST00000545493 A0A096LNJ9 63 aa12.65□□□□□ -0.38
SCARB1-210ENST00000545493 ZNF861PO60384 105 aa12.65□□□□□ -0.38
SCARB1-210ENST00000545493 SMCO4Q9NRQ5 59 aa12.65□□□□□ -0.38
SCARB1-210ENST00000545493 TP73-AS1Q9UF72 201 aa12.65□□□□□ -0.38
SCARB1-210ENST00000545493 LBHQ53QV2 105 aaPredicted RBP12.64□□□□□ -0.39
SCARB1-210ENST00000545493 MRPL55Q7Z7F7 128 aaKnown RBP12.64□□□□□ -0.39
SCARB1-210ENST00000545493 URB1-AS1Q96HZ7 61 aa12.64□□□□□ -0.39
SCARB1-210ENST00000545493 RPS10P5Q9NQ39 176 aa12.64□□□□□ -0.39
SCARB1-210ENST00000545493 IGLC3P0DOY3 106 aa12.62□□□□□ -0.39
SCARB1-210ENST00000545493 C18orf32Q8TCD1 76 aa12.6□□□□□ -0.39
SCARB1-210ENST00000545493 LINC00167Q96N53 147 aa12.59□□□□□ -0.39
SCARB1-210ENST00000545493 IGLV5-37A0A075B6J1 123 aa12.58□□□□□ -0.4
SCARB1-210ENST00000545493 IGLV5-39A0A0G2JS06 123 aa12.58□□□□□ -0.4
SCARB1-210ENST00000545493 H3BRM9 83 aa12.58□□□□□ -0.4
SCARB1-210ENST00000545493 BCE1O60756 84 aa12.58□□□□□ -0.4
SCARB1-210ENST00000545493 RPL13AP40429 203 aaKnown RBP12.58□□□□□ -0.4
SCARB1-210ENST00000545493 ZNF22P17026 224 aaPredicted RBP12.57□□□□□ -0.4
SCARB1-210ENST00000545493 RAB5BP61020 215 aa12.57□□□□□ -0.4
SCARB1-210ENST00000545493 RPL37AP8A6NKH3 93 aa12.56□□□□□ -0.4
SCARB1-210ENST00000545493 HBDP02042 147 aa12.56□□□□□ -0.4
SCARB1-210ENST00000545493 PMCHL1Q16048 86 aa12.56□□□□□ -0.4
SCARB1-210ENST00000545493 TRAPPC1Q9Y5R8 145 aa12.56□□□□□ -0.4
SCARB1-210ENST00000545493 GAGE10A6NGK3 116 aa12.55□□□□□ -0.4
SCARB1-210ENST00000545493 ATP5LO75964 103 aa12.54□□□□□ -0.4
SCARB1-210ENST00000545493 LINC00614P0C842 121 aa12.53□□□□□ -0.4
SCARB1-210ENST00000545493 RPL28P46779 137 aaKnown RBP12.53□□□□□ -0.4
SCARB1-210ENST00000545493 NDUFA6P56556 154 aa12.53□□□□□ -0.4
SCARB1-210ENST00000545493 A0A087X002 238 aa12.52□□□□□ -0.41
SCARB1-210ENST00000545493 SCO1O75880 301 aa12.52□□□□□ -0.41
SCARB1-210ENST00000545493 KRTAP13-1Q8IUC0 172 aa12.52□□□□□ -0.41
SCARB1-210ENST00000545493 NKAPP1Q8N9T2 125 aa12.51□□□□□ -0.41
SCARB1-210ENST00000545493 C11orf86A6NJI1 115 aa12.5□□□□□ -0.41
SCARB1-210ENST00000545493 APOC3P02656 99 aa12.5□□□□□ -0.41
SCARB1-210ENST00000545493 PFN2P35080 140 aa12.5□□□□□ -0.41
SCARB1-210ENST00000545493 ERG28Q9UKR5 140 aa12.49□□□□□ -0.41
SCARB1-210ENST00000545493 IGKV2-28A0A075B6P5 120 aa12.48□□□□□ -0.41
SCARB1-210ENST00000545493 IGKV2D-28P01615 120 aa12.48□□□□□ -0.41
SCARB1-210ENST00000545493 MUC2Q02817 5179 aa12.47□□□□□ -0.41
SCARB1-210ENST00000545493 VPREB1P12018 145 aa12.47□□□□□ -0.41
SCARB1-210ENST00000545493 SND1-IT1Q9HBX3 110 aa12.47□□□□□ -0.41
SCARB1-210ENST00000545493 BAGE3Q86Y29 109 aa12.46□□□□□ -0.41
SCARB1-210ENST00000545493 Q8NDZ9 215 aa12.46□□□□□ -0.41
SCARB1-210ENST00000545493 SNAPINO95295 136 aa12.45□□□□□ -0.42
SCARB1-210ENST00000545493 SVBPQ8N300 66 aa12.45□□□□□ -0.42
SCARB1-210ENST00000545493 ZNF625Q96I27 306 aaPredicted RBP12.45□□□□□ -0.42
SCARB1-210ENST00000545493 YPEL4Q96NS1 127 aa12.45□□□□□ -0.42
SCARB1-210ENST00000545493 UBE2AP49459 152 aa12.44□□□□□ -0.42
SCARB1-210ENST00000545493 TMEM170BQ5T4T1 132 aa12.44□□□□□ -0.42
SCARB1-210ENST00000545493 COX17Q14061 63 aa12.43□□□□□ -0.42
SCARB1-210ENST00000545493 PRR4Q16378 134 aa12.43□□□□□ -0.42
SCARB1-210ENST00000545493 ANAPC11Q9NYG5 84 aa12.43□□□□□ -0.42
SCARB1-210ENST00000545493 CRYGAP11844 174 aa12.42□□□□□ -0.42
SCARB1-210ENST00000545493 NDUFA5Q16718 116 aa12.42□□□□□ -0.42
SCARB1-210ENST00000545493 PRLHP81277 87 aa12.41□□□□□ -0.42
SCARB1-210ENST00000545493 KRTAP13-2Q52LG2 175 aa12.41□□□□□ -0.42
SCARB1-210ENST00000545493 CHTOPQ9Y3Y2 248 aaKnown RBP12.41□□□□□ -0.42
SCARB1-210ENST00000545493 TMEM238C9JI98 176 aa12.4□□□□□ -0.42
SCARB1-210ENST00000545493 TYMSOSQ8TAI1 123 aa12.4□□□□□ -0.42
SCARB1-210ENST00000545493 TMEM126AQ9H061 195 aa12.4□□□□□ -0.42
SCARB1-210ENST00000545493 TSPAN13O95857 204 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 234.5 ms