RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 K7EP34 96 aa8.63□□□□□ -1.03
PAAF1-214ENST00000544552 IGHV3-33P01772 117 aa8.63□□□□□ -1.03
PAAF1-214ENST00000544552 PGPEP1Q9NXJ5 209 aa8.63□□□□□ -1.03
PAAF1-214ENST00000544552 IGLV10-54A0A075B6I4 117 aa8.62□□□□□ -1.03
PAAF1-214ENST00000544552 CXCL5P42830 114 aa8.62□□□□□ -1.03
PAAF1-214ENST00000544552 LINC00308Q8TCZ7 52 aa8.62□□□□□ -1.03
PAAF1-214ENST00000544552 KLK5Q9Y337 293 aaPredicted RBP8.62□□□□□ -1.03
PAAF1-214ENST00000544552 EIF4EBP3O60516 100 aaPredicted RBP8.62□□□□□ -1.03
PAAF1-214ENST00000544552 CRPP02741 224 aa8.62□□□□□ -1.03
PAAF1-214ENST00000544552 MALP21145 153 aa8.62□□□□□ -1.03
PAAF1-214ENST00000544552 KIAA0087Q14695 138 aa8.62□□□□□ -1.03
PAAF1-214ENST00000544552 SPCS1Q9Y6A9 102 aa8.62□□□□□ -1.03
PAAF1-214ENST00000544552 GAGE12HA6NDE8 117 aa8.61□□□□□ -1.03
PAAF1-214ENST00000544552 TSPAN13O95857 204 aa8.61□□□□□ -1.03
PAAF1-214ENST00000544552 DAND5Q8N907 189 aa8.61□□□□□ -1.03
PAAF1-214ENST00000544552 DNAH10OSP0CZ25 163 aa8.6□□□□□ -1.03
PAAF1-214ENST00000544552 UBE2WQ96B02 151 aa8.6□□□□□ -1.03
PAAF1-214ENST00000544552 FBN3Q75N90 2809 aa8.59□□□□□ -1.03
PAAF1-214ENST00000544552 ERG28Q9UKR5 140 aa8.59□□□□□ -1.03
PAAF1-214ENST00000544552 A0A0U1RRA0 63 aa8.58□□□□□ -1.04
PAAF1-214ENST00000544552 CCL18P55774 89 aa8.58□□□□□ -1.04
PAAF1-214ENST00000544552 CKS1BP61024 79 aa8.58□□□□□ -1.04
PAAF1-214ENST00000544552 LYRM7Q5U5X0 104 aa8.58□□□□□ -1.04
PAAF1-214ENST00000544552 CFAP161Q6P656 301 aa8.58□□□□□ -1.04
PAAF1-214ENST00000544552 SOSTDC1Q6X4U4 206 aa8.58□□□□□ -1.04
PAAF1-214ENST00000544552 LINC00158P58513 81 aa8.58□□□□□ -1.04
PAAF1-214ENST00000544552 NPC2P61916 151 aa8.58□□□□□ -1.04
PAAF1-214ENST00000544552 COX17Q14061 63 aa8.58□□□□□ -1.04
PAAF1-214ENST00000544552 KRTAP26-1Q6PEX3 210 aa8.58□□□□□ -1.04
PAAF1-214ENST00000544552 MIR7-3HGQ8N6C7 128 aa8.58□□□□□ -1.04
PAAF1-214ENST00000544552 LINC00588Q9Y4M8 146 aa8.57□□□□□ -1.04
PAAF1-214ENST00000544552 C2orf82Q6UX34 121 aa8.56□□□□□ -1.04
PAAF1-214ENST00000544552 UPK3BQ9BT76 320 aa8.56□□□□□ -1.04
PAAF1-214ENST00000544552 LOC107984156A0A0G2JMH3 177 aa8.55□□□□□ -1.04
PAAF1-214ENST00000544552 ARL17AQ8IVW1 177 aa8.55□□□□□ -1.04
PAAF1-214ENST00000544552 MUC7Q8TAX7 377 aa8.55□□□□□ -1.04
PAAF1-214ENST00000544552 HUWE1Q7Z6Z7 4374 aaKnown RBP8.55□□□□□ -1.04
PAAF1-214ENST00000544552 TRBV20-1A0A075B6N2 111 aa8.54□□□□□ -1.04
PAAF1-214ENST00000544552 TRBV30A0A0K0K1B3 111 aa8.54□□□□□ -1.04
PAAF1-214ENST00000544552 SPAG11BQ08648 103 aa8.54□□□□□ -1.04
PAAF1-214ENST00000544552 PFN2P35080 140 aa8.54□□□□□ -1.04
PAAF1-214ENST00000544552 C1orf43Q9BWL3 253 aa8.54□□□□□ -1.04
PAAF1-214ENST00000544552 GVQW2A0A096LPI5 108 aaPredicted RBP8.52□□□□□ -1.05
PAAF1-214ENST00000544552 NTN5Q8WTR8 489 aaPredicted RBP8.52□□□□□ -1.05
PAAF1-214ENST00000544552 SND1-IT1Q9HBX3 110 aa8.52□□□□□ -1.05
PAAF1-214ENST00000544552 SCGB1C2P0DMR2 95 aa8.51□□□□□ -1.05
PAAF1-214ENST00000544552 PSMB2P49721 201 aa8.51□□□□□ -1.05
PAAF1-214ENST00000544552 Q1RN00 199 aa8.51□□□□□ -1.05
PAAF1-214ENST00000544552 TRAV13-2A0A0B4J235 113 aa8.51□□□□□ -1.05
PAAF1-214ENST00000544552 F8W1H4 67 aa8.51□□□□□ -1.05
PAAF1-214ENST00000544552 F8WDY8 70 aa8.51□□□□□ -1.05
PAAF1-214ENST00000544552 H3BMG7 143 aa8.51□□□□□ -1.05
PAAF1-214ENST00000544552 H7C2G1 150 aa8.51□□□□□ -1.05
PAAF1-214ENST00000544552 RPL13AP40429 203 aaKnown RBP8.51□□□□□ -1.05
PAAF1-214ENST00000544552 COX6CP09669 75 aa8.5□□□□□ -1.05
PAAF1-214ENST00000544552 UNQ6190/PRO20217Q6UXQ8 127 aa8.5□□□□□ -1.05
PAAF1-214ENST00000544552 APLNQ9ULZ1 77 aa8.5□□□□□ -1.05
PAAF1-214ENST00000544552 TRIAP1O43715 76 aa8.49□□□□□ -1.05
PAAF1-214ENST00000544552 C6orf223Q8N319 242 aa8.49□□□□□ -1.05
PAAF1-214ENST00000544552 IGKV2-28A0A075B6P5 120 aa8.48□□□□□ -1.05
PAAF1-214ENST00000544552 IGKV2D-24A0A075B6R9 120 aa8.48□□□□□ -1.05
PAAF1-214ENST00000544552 ZNF561-AS1K7EIQ3 104 aa8.48□□□□□ -1.05
PAAF1-214ENST00000544552 TCL1BO95988 128 aa8.48□□□□□ -1.05
PAAF1-214ENST00000544552 IGKV2D-28P01615 120 aa8.48□□□□□ -1.05
PAAF1-214ENST00000544552 C10orf25Q5T742 122 aa8.48□□□□□ -1.05
PAAF1-214ENST00000544552 C2orf48Q96LS8 159 aa8.48□□□□□ -1.05
PAAF1-214ENST00000544552 NDUFC2O95298 119 aa8.47□□□□□ -1.05
PAAF1-214ENST00000544552 C15orf56Q8N910 161 aa8.47□□□□□ -1.05
PAAF1-214ENST00000544552 RMI2Q96E14 147 aa8.47□□□□□ -1.05
PAAF1-214ENST00000544552 PRO0461Q9UI25 63 aa8.47□□□□□ -1.05
PAAF1-214ENST00000544552 C9orf116Q5BN46 136 aaPredicted RBP8.47□□□□□ -1.05
PAAF1-214ENST00000544552 LINC00526Q96FQ7 95 aa8.47□□□□□ -1.05
PAAF1-214ENST00000544552 DNAH9Q9NYC9 4486 aa8.46□□□□□ -1.06
PAAF1-214ENST00000544552 NUPR2A6NF83 97 aa8.46□□□□□ -1.06
PAAF1-214ENST00000544552 LINC00337Q8N6G1 96 aa8.46□□□□□ -1.06
PAAF1-214ENST00000544552 STAB2Q8WWQ8 2551 aa8.46□□□□□ -1.06
PAAF1-214ENST00000544552 CAMK2N2Q96S95 79 aa8.45□□□□□ -1.06
PAAF1-214ENST00000544552 Q9HAA7 133 aa8.45□□□□□ -1.06
PAAF1-214ENST00000544552 C6orf48Q9UBA6 75 aa8.45□□□□□ -1.06
PAAF1-214ENST00000544552 RPL28P46779 137 aaKnown RBP8.44□□□□□ -1.06
PAAF1-214ENST00000544552 ATXN8Q156A1 80 aa8.44□□□□□ -1.06
PAAF1-214ENST00000544552 PRKDCP78527 4128 aaKnown RBP8.44□□□□□ -1.06
PAAF1-214ENST00000544552 HIGD2BQ4VC39 106 aa8.43□□□□□ -1.06
PAAF1-214ENST00000544552 WWC2-AS2Q96NR7 200 aa8.43□□□□□ -1.06
PAAF1-214ENST00000544552 COL7A1Q02388 2944 aa8.43□□□□□ -1.06
PAAF1-214ENST00000544552 WFDC2Q14508 124 aa8.43□□□□□ -1.06
PAAF1-214ENST00000544552 LINC01600Q96MT4 127 aa8.42□□□□□ -1.06
PAAF1-214ENST00000544552 M0QXV9 152 aa8.41□□□□□ -1.06
PAAF1-214ENST00000544552 Q6ZRU5 148 aa8.41□□□□□ -1.06
PAAF1-214ENST00000544552 LST1O00453 97 aa8.4□□□□□ -1.06
PAAF1-214ENST00000544552 RNF151Q2KHN1 245 aa8.4□□□□□ -1.06
PAAF1-214ENST00000544552 LINC01620Q4KN68 170 aa8.4□□□□□ -1.06
PAAF1-214ENST00000544552 UBE2DNLQ8IWF7 75 aa8.4□□□□□ -1.06
PAAF1-214ENST00000544552 SMCPP49901 116 aaPredicted RBP8.4□□□□□ -1.07
PAAF1-214ENST00000544552 SYCNQ0VAF6 134 aa8.4□□□□□ -1.07
PAAF1-214ENST00000544552 OCIAD2Q56VL3 154 aa8.4□□□□□ -1.07
PAAF1-214ENST00000544552 SMIM11BQ8TCY0 68 aa8.4□□□□□ -1.07
PAAF1-214ENST00000544552 OR13C6PQ8NH95 151 aa8.39□□□□□ -1.07
PAAF1-214ENST00000544552 TMEM126AQ9H061 195 aa8.39□□□□□ -1.07
PAAF1-214ENST00000544552 TRBV10-2A0A0K0K1G8 114 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms