RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 CELA1Q9UNI1 258 aa9.63□□□□□ -0.87
MSH2-206ENST00000543555 LST1O00453 97 aa9.62□□□□□ -0.87
MSH2-206ENST00000543555 SS18Q15532 418 aa9.62□□□□□ -0.87
MSH2-206ENST00000543555 MIR7-3HGQ8N6C7 128 aa9.62□□□□□ -0.87
MSH2-206ENST00000543555 IGHV4-30-4P0DP06 118 aa9.61□□□□□ -0.87
MSH2-206ENST00000543555 ATP5G1P05496 136 aa9.61□□□□□ -0.87
MSH2-206ENST00000543555 XCL1P47992 114 aa9.61□□□□□ -0.87
MSH2-206ENST00000543555 CLPSL2Q6UWE3 100 aa9.61□□□□□ -0.87
MSH2-206ENST00000543555 SHISA2Q6UWI4 295 aa9.6□□□□□ -0.87
MSH2-206ENST00000543555 TRAV26-1A0A087WT03 109 aa9.59□□□□□ -0.87
MSH2-206ENST00000543555 IBA57-AS1B1ANH7 110 aa9.59□□□□□ -0.87
MSH2-206ENST00000543555 SPART-AS1P0CW21 52 aa9.59□□□□□ -0.87
MSH2-206ENST00000543555 LINC00158P58513 81 aa9.59□□□□□ -0.87
MSH2-206ENST00000543555 NTN5Q8WTR8 489 aaPredicted RBP9.59□□□□□ -0.87
MSH2-206ENST00000543555 CDIP1Q9H305 208 aa9.59□□□□□ -0.87
MSH2-206ENST00000543555 H3BT86 120 aa9.58□□□□□ -0.88
MSH2-206ENST00000543555 COX7A2LO14548 114 aa9.58□□□□□ -0.88
MSH2-206ENST00000543555 C2orf82Q6UX34 121 aa9.58□□□□□ -0.88
MSH2-206ENST00000543555 C6orf226Q5I0X4 101 aa9.57□□□□□ -0.88
MSH2-206ENST00000543555 LINC01561Q8N1V8 128 aa9.57□□□□□ -0.88
MSH2-206ENST00000543555 LINC00269Q8N2A0 174 aa9.57□□□□□ -0.88
MSH2-206ENST00000543555 SND1-IT1Q9HBX3 110 aa9.57□□□□□ -0.88
MSH2-206ENST00000543555 TRAV13-2A0A0B4J235 113 aa9.56□□□□□ -0.88
MSH2-206ENST00000543555 Q8IZM0 81 aa9.56□□□□□ -0.88
MSH2-206ENST00000543555 Q8N3U1 123 aa9.56□□□□□ -0.88
MSH2-206ENST00000543555 C11orf68Q9H3H3 251 aaKnown RBP9.56□□□□□ -0.88
MSH2-206ENST00000543555 CRPP02741 224 aa9.56□□□□□ -0.88
MSH2-206ENST00000543555 HTN3P15516 51 aa9.56□□□□□ -0.88
MSH2-206ENST00000543555 PFN2P35080 140 aa9.56□□□□□ -0.88
MSH2-206ENST00000543555 CCL18P55774 89 aa9.56□□□□□ -0.88
MSH2-206ENST00000543555 MRPL23Q16540 153 aaKnown RBP9.56□□□□□ -0.88
MSH2-206ENST00000543555 IGKV2-28A0A075B6P5 120 aa9.55□□□□□ -0.88
MSH2-206ENST00000543555 IGKV2D-28P01615 120 aa9.55□□□□□ -0.88
MSH2-206ENST00000543555 TEX49A0A1B0GTD5 131 aa9.55□□□□□ -0.88
MSH2-206ENST00000543555 ANGP03950 147 aaKnown RBP9.55□□□□□ -0.88
MSH2-206ENST00000543555 LINC00337Q8N6G1 96 aa9.55□□□□□ -0.88
MSH2-206ENST00000543555 KRTAP10-11P60412 298 aa9.54□□□□□ -0.88
MSH2-206ENST00000543555 CD164L2Q6UWJ8 174 aa9.54□□□□□ -0.88
MSH2-206ENST00000543555 UBE2WQ96B02 151 aa9.54□□□□□ -0.88
MSH2-206ENST00000543555 REG3AQ06141 175 aa9.54□□□□□ -0.88
MSH2-206ENST00000543555 SCGB1A1P11684 91 aa9.53□□□□□ -0.88
MSH2-206ENST00000543555 CHCHD10Q8WYQ3 142 aaPredicted RBP9.53□□□□□ -0.88
MSH2-206ENST00000543555 IGLV10-54A0A075B6I4 117 aa9.52□□□□□ -0.89
MSH2-206ENST00000543555 RPL28P46779 137 aaKnown RBP9.52□□□□□ -0.89
MSH2-206ENST00000543555 LELP1Q5T871 98 aa9.52□□□□□ -0.89
MSH2-206ENST00000543555 XGP55808 180 aa9.5□□□□□ -0.89
MSH2-206ENST00000543555 CKS1BP61024 79 aa9.5□□□□□ -0.89
MSH2-206ENST00000543555 KIAA0087Q14695 138 aa9.5□□□□□ -0.89
MSH2-206ENST00000543555 TRACP01848 142 aa9.5□□□□□ -0.89
MSH2-206ENST00000543555 TENM3Q9P273 2699 aa9.5□□□□□ -0.89
MSH2-206ENST00000543555 FAM218AQ96MZ4 157 aa9.49□□□□□ -0.89
MSH2-206ENST00000543555 MT-ATP8P03928 68 aa9.49□□□□□ -0.89
MSH2-206ENST00000543555 MALP21145 153 aa9.49□□□□□ -0.89
MSH2-206ENST00000543555 CXCL5P42830 114 aa9.48□□□□□ -0.89
MSH2-206ENST00000543555 CFAP161Q6P656 301 aa9.48□□□□□ -0.89
MSH2-206ENST00000543555 SMIM11BQ8TCY0 68 aa9.48□□□□□ -0.89
MSH2-206ENST00000543555 RETNQ9HD89 108 aa9.48□□□□□ -0.89
MSH2-206ENST00000543555 TRAV8-4A0A0B4J246 113 aa9.47□□□□□ -0.89
MSH2-206ENST00000543555 DEFB121Q5J5C9 76 aa9.47□□□□□ -0.89
MSH2-206ENST00000543555 EGFEM1PQ0D2K5 195 aa9.46□□□□□ -0.9
MSH2-206ENST00000543555 COX17Q14061 63 aa9.46□□□□□ -0.9
MSH2-206ENST00000543555 LYPD5Q6UWN5 251 aa9.46□□□□□ -0.9
MSH2-206ENST00000543555 PRR34Q9NV39 138 aa9.46□□□□□ -0.9
MSH2-206ENST00000543555 KLK12Q9UKR0 248 aa9.45□□□□□ -0.9
MSH2-206ENST00000543555 OR13C6PQ8NH95 151 aa9.44□□□□□ -0.9
MSH2-206ENST00000543555 BAALC-AS2P0C853 105 aa9.44□□□□□ -0.9
MSH2-206ENST00000543555 MRAPQ8TCY5 172 aa9.44□□□□□ -0.9
MSH2-206ENST00000543555 KLK5Q9Y337 293 aaPredicted RBP9.43□□□□□ -0.9
MSH2-206ENST00000543555 H0YGX0 51 aa9.43□□□□□ -0.9
MSH2-206ENST00000543555 H3BNG1 76 aa9.43□□□□□ -0.9
MSH2-206ENST00000543555 ENHOQ6UWT2 76 aa9.43□□□□□ -0.9
MSH2-206ENST00000543555 C9orf116Q5BN46 136 aaPredicted RBP9.42□□□□□ -0.9
MSH2-206ENST00000543555 A0A087WYN8 130 aa9.42□□□□□ -0.9
MSH2-206ENST00000543555 SPAG11BQ08648 103 aa9.42□□□□□ -0.9
MSH2-206ENST00000543555 KPRPQ5T749 579 aaPredicted RBP9.42□□□□□ -0.9
MSH2-206ENST00000543555 Q9HAA7 133 aa9.42□□□□□ -0.9
MSH2-206ENST00000543555 NDUFC2O95298 119 aa9.41□□□□□ -0.9
MSH2-206ENST00000543555 Q6ZTC4 211 aa9.41□□□□□ -0.9
MSH2-206ENST00000543555 C22orf24Q9Y442 160 aa9.41□□□□□ -0.9
MSH2-206ENST00000543555 FAM240AA0A1B0GVK7 77 aa9.41□□□□□ -0.9
MSH2-206ENST00000543555 COL7A1Q02388 2944 aa9.4□□□□□ -0.9
MSH2-206ENST00000543555 C6orf223Q8N319 242 aa9.4□□□□□ -0.9
MSH2-206ENST00000543555 MEGF8Q7Z7M0 2845 aa9.39□□□□□ -0.91
MSH2-206ENST00000543555 DNAL4O96015 105 aa9.39□□□□□ -0.91
MSH2-206ENST00000543555 PRR3P79522 188 aaKnown RBP9.39□□□□□ -0.91
MSH2-206ENST00000543555 C10orf25Q5T742 122 aa9.39□□□□□ -0.91
MSH2-206ENST00000543555 UNQ6190/PRO20217Q6UXQ8 127 aa9.39□□□□□ -0.91
MSH2-206ENST00000543555 DNAH3Q8TD57 4116 aa9.39□□□□□ -0.91
MSH2-206ENST00000543555 WFDC10BQ8IUB3 73 aa9.39□□□□□ -0.91
MSH2-206ENST00000543555 LINC00526Q96FQ7 95 aa9.38□□□□□ -0.91
MSH2-206ENST00000543555 SNCGO76070 127 aa9.37□□□□□ -0.91
MSH2-206ENST00000543555 NANOS2P60321 138 aaKnown RBP9.37□□□□□ -0.91
MSH2-206ENST00000543555 A0A0J9YWU9 116 aa9.37□□□□□ -0.91
MSH2-206ENST00000543555 MUC7Q8TAX7 377 aa9.37□□□□□ -0.91
MSH2-206ENST00000543555 LECT2O14960 151 aa9.37□□□□□ -0.91
MSH2-206ENST00000543555 C15orf53Q8NAA6 179 aa9.37□□□□□ -0.91
MSH2-206ENST00000543555 Q8NDZ9 215 aa9.36□□□□□ -0.91
MSH2-206ENST00000543555 TMEM126AQ9H061 195 aa9.36□□□□□ -0.91
MSH2-206ENST00000543555 ACYP1P07311 99 aa9.34□□□□□ -0.91
MSH2-206ENST00000543555 K7EIL1 84 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms