RNA–Protein interactions for RNA: ENST00000543190.5

LTBR-211, Transcript of lymphotoxin beta receptor, humanhuman

TSL 3 BASIC

Gene LTBR, Length 785 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-211ENST00000543190 LINC01549A6NIU2 74 aa11.14□□□□□ -0.63
LTBR-211ENST00000543190 F8VRH5 84 aa11.14□□□□□ -0.63
LTBR-211ENST00000543190 CXCL5P42830 114 aa11.14□□□□□ -0.63
LTBR-211ENST00000543190 TOMM6Q96B49 74 aa11.14□□□□□ -0.63
LTBR-211ENST00000543190 LBHQ53QV2 105 aaPredicted RBP11.13□□□□□ -0.63
LTBR-211ENST00000543190 ZC2HC1BQ5TFG8 222 aa11.13□□□□□ -0.63
LTBR-211ENST00000543190 ALKBH7Q9BT30 221 aaPredicted RBP11.13□□□□□ -0.63
LTBR-211ENST00000543190 CDKN2A-AS1Q9UH64 79 aa11.13□□□□□ -0.63
LTBR-211ENST00000543190 C22orf24Q9Y442 160 aa11.13□□□□□ -0.63
LTBR-211ENST00000543190 ERASQ7Z444 233 aa11.12□□□□□ -0.63
LTBR-211ENST00000543190 TRAV9-1A0A075B6T8 112 aa11.11□□□□□ -0.63
LTBR-211ENST00000543190 IGLV5-45A0A087WSX0 123 aa11.11□□□□□ -0.63
LTBR-211ENST00000543190 LINC01546A6NGU7 62 aa11.11□□□□□ -0.63
LTBR-211ENST00000543190 CTDSP1Q9GZU7 261 aa11.1□□□□□ -0.63
LTBR-211ENST00000543190 TOMM7Q9P0U1 55 aa11.1□□□□□ -0.63
LTBR-211ENST00000543190 GEMIN7Q9H840 131 aaKnown RBP11.09□□□□□ -0.63
LTBR-211ENST00000543190 PDZD11Q5EBL8 140 aa11.08□□□□□ -0.64
LTBR-211ENST00000543190 MRPL55Q7Z7F7 128 aaKnown RBP11.08□□□□□ -0.64
LTBR-211ENST00000543190 XAGE1AQ9HD64 81 aa11.08□□□□□ -0.64
LTBR-211ENST00000543190 TINCRA0A1B0GVN0 87 aa11.07□□□□□ -0.64
LTBR-211ENST00000543190 SMIM1B2RUZ4 78 aa11.07□□□□□ -0.64
LTBR-211ENST00000543190 IGLV5-37A0A075B6J1 123 aa11.06□□□□□ -0.64
LTBR-211ENST00000543190 RAB14P61106 215 aa11.06□□□□□ -0.64
LTBR-211ENST00000543190 BCE1O60756 84 aa11.05□□□□□ -0.64
LTBR-211ENST00000543190 RPL28P46779 137 aaKnown RBP11.05□□□□□ -0.64
LTBR-211ENST00000543190 LINC00469Q8N7U9 141 aa11.05□□□□□ -0.64
LTBR-211ENST00000543190 CLLU1Q5K131 121 aa11.03□□□□□ -0.64
LTBR-211ENST00000543190 GNB1LQ9BYB4 327 aa11.03□□□□□ -0.64
LTBR-211ENST00000543190 UQCC3Q6UW78 93 aa11.02□□□□□ -0.65
LTBR-211ENST00000543190 KRTAP13-1Q8IUC0 172 aa11.02□□□□□ -0.65
LTBR-211ENST00000543190 COX7B2Q8TF08 81 aa11.02□□□□□ -0.65
LTBR-211ENST00000543190 SCGB3A1Q96QR1 104 aa11.02□□□□□ -0.65
LTBR-211ENST00000543190 CST9LQ9H4G1 147 aa11.01□□□□□ -0.65
LTBR-211ENST00000543190 CTAG1AP78358 180 aa11□□□□□ -0.65
LTBR-211ENST00000543190 LINC00167Q96N53 147 aa11□□□□□ -0.65
LTBR-211ENST00000543190 MRPL18Q9H0U6 180 aaKnown RBP11□□□□□ -0.65
LTBR-211ENST00000543190 A0A087X002 238 aa10.99□□□□□ -0.65
LTBR-211ENST00000543190 CRYGAP11844 174 aa10.99□□□□□ -0.65
LTBR-211ENST00000543190 ADCYAP1P18509 176 aa10.99□□□□□ -0.65
LTBR-211ENST00000543190 COX19Q49B96 90 aa10.99□□□□□ -0.65
LTBR-211ENST00000543190 PMVKQ15126 192 aa10.98□□□□□ -0.65
LTBR-211ENST00000543190 PRR4Q16378 134 aa10.98□□□□□ -0.65
LTBR-211ENST00000543190 KIAA1644Q3SXP7 199 aa10.98□□□□□ -0.65
LTBR-211ENST00000543190 MUC2Q02817 5179 aa10.98□□□□□ -0.65
LTBR-211ENST00000543190 FAM229BQ4G0N7 80 aa10.97□□□□□ -0.65
LTBR-211ENST00000543190 IGLV5-39A0A0G2JS06 123 aa10.96□□□□□ -0.65
LTBR-211ENST00000543190 TMEM218A2RU14 115 aa10.96□□□□□ -0.65
LTBR-211ENST00000543190 SEC11CQ9BY50 192 aa10.95□□□□□ -0.66
LTBR-211ENST00000543190 H3BRM9 83 aa10.94□□□□□ -0.66
LTBR-211ENST00000543190 IGLC3P0DOY3 106 aa10.93□□□□□ -0.66
LTBR-211ENST00000543190 TYMSOSQ8TAI1 123 aa10.93□□□□□ -0.66
LTBR-211ENST00000543190 RPL37AP8A6NKH3 93 aa10.92□□□□□ -0.66
LTBR-211ENST00000543190 ATP5LO75964 103 aa10.92□□□□□ -0.66
LTBR-211ENST00000543190 SPINK8P0C7L1 97 aa10.92□□□□□ -0.66
LTBR-211ENST00000543190 S100PP25815 95 aa10.92□□□□□ -0.66
LTBR-211ENST00000543190 COX17Q14061 63 aa10.92□□□□□ -0.66
LTBR-211ENST00000543190 NKAPP1Q8N9T2 125 aa10.92□□□□□ -0.66
LTBR-211ENST00000543190 KRTAP13-2Q52LG2 175 aa10.9□□□□□ -0.66
LTBR-211ENST00000543190 A0A0U1RQV1 116 aa10.89□□□□□ -0.67
LTBR-211ENST00000543190 SFTA2Q6UW10 78 aa10.89□□□□□ -0.67
LTBR-211ENST00000543190 FA2HQ7L5A8 372 aa10.89□□□□□ -0.67
LTBR-211ENST00000543190 A0A096LNJ9 63 aa10.88□□□□□ -0.67
LTBR-211ENST00000543190 VPREB1P12018 145 aa10.88□□□□□ -0.67
LTBR-211ENST00000543190 C10orf91Q5T1B1 145 aa10.88□□□□□ -0.67
LTBR-211ENST00000543190 TSPAN13O95857 204 aa10.87□□□□□ -0.67
LTBR-211ENST00000543190 RAB5BP61020 215 aa10.87□□□□□ -0.67
LTBR-211ENST00000543190 SMCO4Q9NRQ5 59 aa10.87□□□□□ -0.67
LTBR-211ENST00000543190 GAGE10A6NGK3 116 aa10.86□□□□□ -0.67
LTBR-211ENST00000543190 UBE2AP49459 152 aa10.86□□□□□ -0.67
LTBR-211ENST00000543190 ZNF22P17026 224 aaPredicted RBP10.85□□□□□ -0.67
LTBR-211ENST00000543190 SND1-IT1Q9HBX3 110 aa10.85□□□□□ -0.67
LTBR-211ENST00000543190 RPL24P83731 157 aaKnown RBP10.84□□□□□ -0.67
LTBR-211ENST00000543190 IFITM2Q01629 132 aa10.84□□□□□ -0.67
LTBR-211ENST00000543190 FABP9Q0Z7S8 132 aa10.84□□□□□ -0.67
LTBR-211ENST00000543190 RHEBQ15382 184 aa10.84□□□□□ -0.67
LTBR-211ENST00000543190 TMEM126AQ9H061 195 aa10.84□□□□□ -0.67
LTBR-211ENST00000543190 ERG28Q9UKR5 140 aa10.84□□□□□ -0.67
LTBR-211ENST00000543190 TPRXLQ17RH7 258 aa10.83□□□□□ -0.68
LTBR-211ENST00000543190 LINC00304Q8N9R0 145 aa10.83□□□□□ -0.68
LTBR-211ENST00000543190 URB1-AS1Q96HZ7 61 aa10.83□□□□□ -0.68
LTBR-211ENST00000543190 IGKV2-28A0A075B6P5 120 aa10.82□□□□□ -0.68
LTBR-211ENST00000543190 IGKV2D-28P01615 120 aa10.82□□□□□ -0.68
LTBR-211ENST00000543190 LINC00614P0C842 121 aa10.82□□□□□ -0.68
LTBR-211ENST00000543190 C18orf32Q8TCD1 76 aa10.82□□□□□ -0.68
LTBR-211ENST00000543190 ANAPC11Q9NYG5 84 aa10.82□□□□□ -0.68
LTBR-211ENST00000543190 HBDP02042 147 aa10.81□□□□□ -0.68
LTBR-211ENST00000543190 PFN2P35080 140 aa10.81□□□□□ -0.68
LTBR-211ENST00000543190 ZNF625Q96I27 306 aaPredicted RBP10.81□□□□□ -0.68
LTBR-211ENST00000543190 M0R378 163 aa10.8□□□□□ -0.68
LTBR-211ENST00000543190 PLEKHB2Q96CS7 222 aa10.8□□□□□ -0.68
LTBR-211ENST00000543190 IGKV2D-26A0A0A0MRZ7 120 aa10.79□□□□□ -0.68
LTBR-211ENST00000543190 LCE2AQ5TA79 106 aaPredicted RBP10.79□□□□□ -0.68
LTBR-211ENST00000543190 SCO1O75880 301 aa10.78□□□□□ -0.68
LTBR-211ENST00000543190 PRLHP81277 87 aa10.78□□□□□ -0.68
LTBR-211ENST00000543190 C11orf86A6NJI1 115 aa10.77□□□□□ -0.69
LTBR-211ENST00000543190 FAM19A1Q7Z5A9 133 aa10.77□□□□□ -0.69
LTBR-211ENST00000543190 Q8NDZ9 215 aa10.77□□□□□ -0.69
LTBR-211ENST00000543190 TMEM238C9JI98 176 aa10.76□□□□□ -0.69
LTBR-211ENST00000543190 RPS10P5Q9NQ39 176 aa10.75□□□□□ -0.69
LTBR-211ENST00000543190 NDUFA6P56556 154 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms