RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 LY6G6DO95868 133 aa8.99□□□□□ -0.97
DDX11-223ENST00000542838 IGLV1-51P01701 117 aa8.98□□□□□ -0.97
DDX11-223ENST00000542838 SS18Q15532 418 aa8.98□□□□□ -0.97
DDX11-223ENST00000542838 Q6JHZ5 121 aa8.98□□□□□ -0.97
DDX11-223ENST00000542838 KRTAP1-3Q8IUG1 177 aa8.98□□□□□ -0.97
DDX11-223ENST00000542838 CLPSL2Q6UWE3 100 aa8.97□□□□□ -0.97
DDX11-223ENST00000542838 RPL18AQ02543 176 aaKnown RBP8.97□□□□□ -0.97
DDX11-223ENST00000542838 ZNF462Q96JM2 2506 aa8.97□□□□□ -0.97
DDX11-223ENST00000542838 GYPEP15421 78 aa8.96□□□□□ -0.97
DDX11-223ENST00000542838 ZNF469Q96JG9 3925 aaPredicted RBP8.96□□□□□ -0.97
DDX11-223ENST00000542838 Q8IZM0 81 aa8.96□□□□□ -0.98
DDX11-223ENST00000542838 LINC01006Q8NI28 216 aa8.96□□□□□ -0.98
DDX11-223ENST00000542838 NF1P21359 2839 aa8.95□□□□□ -0.98
DDX11-223ENST00000542838 A0A087WVE0 104 aa8.95□□□□□ -0.98
DDX11-223ENST00000542838 SETD2Q9BYW2 2564 aaPredicted RBP8.95□□□□□ -0.98
DDX11-223ENST00000542838 A0A1B0GX51 115 aa8.95□□□□□ -0.98
DDX11-223ENST00000542838 PRR3P79522 188 aaKnown RBP8.95□□□□□ -0.98
DDX11-223ENST00000542838 NBPF19A0A087WUL8 3843 aa8.94□□□□□ -0.98
DDX11-223ENST00000542838 CRYGAP11844 174 aa8.94□□□□□ -0.98
DDX11-223ENST00000542838 A0A096LPF7 62 aa8.94□□□□□ -0.98
DDX11-223ENST00000542838 hADV29S1A0JD25 119 aa8.94□□□□□ -0.98
DDX11-223ENST00000542838 CCKP06307 115 aa8.94□□□□□ -0.98
DDX11-223ENST00000542838 WFDC11Q8NEX6 87 aa8.94□□□□□ -0.98
DDX11-223ENST00000542838 A0A1B0GUV1 79 aa8.93□□□□□ -0.98
DDX11-223ENST00000542838 KIR2DL5BQ8NHK3 375 aa8.93□□□□□ -0.98
DDX11-223ENST00000542838 ZFYVE26Q68DK2 2539 aa8.93□□□□□ -0.98
DDX11-223ENST00000542838 NANOS2P60321 138 aaKnown RBP8.92□□□□□ -0.98
DDX11-223ENST00000542838 NIPBLQ6KC79 2804 aaeCLIP8.92□□□□□ -0.98
DDX11-223ENST00000542838 LINC01561Q8N1V8 128 aa8.92□□□□□ -0.98
DDX11-223ENST00000542838 Q8N814 137 aa8.92□□□□□ -0.98
DDX11-223ENST00000542838 LINC00167Q96N53 147 aa8.92□□□□□ -0.98
DDX11-223ENST00000542838 BBC3Q96PG8 261 aaPredicted RBP8.92□□□□□ -0.98
DDX11-223ENST00000542838 ITPR3Q14573 2671 aa8.92□□□□□ -0.98
DDX11-223ENST00000542838 JMJD7-PLA2G4BH0Y9G9 81 aa8.91□□□□□ -0.98
DDX11-223ENST00000542838 LOC107984640A0A0U1RRK4 108 aa8.9□□□□□ -0.98
DDX11-223ENST00000542838 SERP2Q8N6R1 65 aa8.9□□□□□ -0.98
DDX11-223ENST00000542838 USP17L23D6RBM5 183 aa8.9□□□□□ -0.99
DDX11-223ENST00000542838 TMEM256-PLSCR3K7ERE1 68 aa8.9□□□□□ -0.99
DDX11-223ENST00000542838 LINC00612Q8N6U2 182 aa8.9□□□□□ -0.99
DDX11-223ENST00000542838 C16orf95Q9H693 158 aa8.9□□□□□ -0.99
DDX11-223ENST00000542838 FN1P02751 2386 aaKnown RBP8.89□□□□□ -0.99
DDX11-223ENST00000542838 CCDC168Q8NDH2 2452 aa8.89□□□□□ -0.99
DDX11-223ENST00000542838 NDUFC2O95298 119 aa8.89□□□□□ -0.99
DDX11-223ENST00000542838 LINC00269Q8N2A0 174 aa8.89□□□□□ -0.99
DDX11-223ENST00000542838 CYSTM1Q9H1C7 97 aa8.89□□□□□ -0.99
DDX11-223ENST00000542838 PRO0255Q9UI72 69 aa8.89□□□□□ -0.99
DDX11-223ENST00000542838 KIAA0087Q14695 138 aa8.89□□□□□ -0.99
DDX11-223ENST00000542838 IGLV10-54A0A075B6I4 117 aa8.88□□□□□ -0.99
DDX11-223ENST00000542838 S100A7L2Q5SY68 101 aa8.88□□□□□ -0.99
DDX11-223ENST00000542838 RNASE1P07998 156 aaKnown RBP8.88□□□□□ -0.99
DDX11-223ENST00000542838 COX17Q14061 63 aa8.88□□□□□ -0.99
DDX11-223ENST00000542838 C9orf116Q5BN46 136 aaPredicted RBP8.88□□□□□ -0.99
DDX11-223ENST00000542838 CD164L2Q6UWJ8 174 aa8.88□□□□□ -0.99
DDX11-223ENST00000542838 UBR5O95071 2799 aaPredicted RBP8.87□□□□□ -0.99
DDX11-223ENST00000542838 J3KT08 172 aa8.87□□□□□ -0.99
DDX11-223ENST00000542838 ZNF843Q8N446 348 aa8.87□□□□□ -0.99
DDX11-223ENST00000542838 CHCHD10Q8WYQ3 142 aaPredicted RBP8.87□□□□□ -0.99
DDX11-223ENST00000542838 APCP25054 2843 aa8.86□□□□□ -0.99
DDX11-223ENST00000542838 C6orf99Q4VX62 202 aa8.86□□□□□ -0.99
DDX11-223ENST00000542838 FLNAP21333 2647 aaKnown RBP8.86□□□□□ -0.99
DDX11-223ENST00000542838 ANGP03950 147 aaKnown RBP8.86□□□□□ -0.99
DDX11-223ENST00000542838 HILS1P60008 231 aa8.86□□□□□ -0.99
DDX11-223ENST00000542838 WFDC9Q8NEX5 89 aa8.86□□□□□ -0.99
DDX11-223ENST00000542838 X6R8D5 127 aa8.86□□□□□ -0.99
DDX11-223ENST00000542838 UPK3BQ9BT76 320 aa8.85□□□□□ -0.99
DDX11-223ENST00000542838 Q8N3U1 123 aa8.85□□□□□ -0.99
DDX11-223ENST00000542838 REG3AQ06141 175 aa8.84□□□□□ -0.99
DDX11-223ENST00000542838 Q8NDZ9 215 aa8.84□□□□□ -0.99
DDX11-223ENST00000542838 IGHV4-28A0A0C4DH34 117 aa8.84□□□□□ -0.99
DDX11-223ENST00000542838 ATP5EP2Q5VTU8 51 aa8.84□□□□□ -0.99
DDX11-223ENST00000542838 USP24Q9UPU5 2620 aa8.83□□□□□ -1
DDX11-223ENST00000542838 ENHOQ6UWT2 76 aa8.82□□□□□ -1
DDX11-223ENST00000542838 FAM19A1Q7Z5A9 133 aa8.82□□□□□ -1
DDX11-223ENST00000542838 UBL5Q9BZL1 73 aa8.82□□□□□ -1
DDX11-223ENST00000542838 SMIM9A6NGZ8 99 aa8.82□□□□□ -1
DDX11-223ENST00000542838 TMEM258P61165 79 aa8.82□□□□□ -1
DDX11-223ENST00000542838 LINC00575Q6W349 94 aa8.82□□□□□ -1
DDX11-223ENST00000542838 TRAV23DV6A0A075B6W5 121 aa8.82□□□□□ -1
DDX11-223ENST00000542838 GHRHP01286 108 aa8.82□□□□□ -1
DDX11-223ENST00000542838 KRTAP1-1Q07627 177 aa8.82□□□□□ -1
DDX11-223ENST00000542838 DEFB4AO15263 64 aa8.81□□□□□ -1
DDX11-223ENST00000542838 FAM19A5Q7Z5A7 132 aaPredicted RBP8.81□□□□□ -1
DDX11-223ENST00000542838 RPS28P62857 69 aaKnown RBP8.81□□□□□ -1
DDX11-223ENST00000542838 LYPD5Q6UWN5 251 aa8.81□□□□□ -1
DDX11-223ENST00000542838 LYRM9A8MSI8 78 aa8.8□□□□□ -1
DDX11-223ENST00000542838 RBM3P98179 157 aaKnown RBP8.8□□□□□ -1
DDX11-223ENST00000542838 UNQ6190/PRO20217Q6UXQ8 127 aa8.8□□□□□ -1
DDX11-223ENST00000542838 C6orf223Q8N319 242 aa8.8□□□□□ -1
DDX11-223ENST00000542838 C10orf25Q5T742 122 aa8.79□□□□□ -1
DDX11-223ENST00000542838 LAMTOR3Q9UHA4 124 aa8.79□□□□□ -1
DDX11-223ENST00000542838 MTORP42345 2549 aa8.79□□□□□ -1
DDX11-223ENST00000542838 ACANP16112 2415 aa8.79□□□□□ -1
DDX11-223ENST00000542838 GCN1Q92616 2671 aaKnown RBP8.79□□□□□ -1
DDX11-223ENST00000542838 LINC00482Q8N8I6 264 aa8.79□□□□□ -1
DDX11-223ENST00000542838 DPH3Q96FX2 82 aa8.79□□□□□ -1
DDX11-223ENST00000542838 SPAG11BQ08648 103 aa8.79□□□□□ -1
DDX11-223ENST00000542838 Q6ZQT0 140 aa8.78□□□□□ -1
DDX11-223ENST00000542838 TRBV10-3A0A0K0K1G6 114 aa8.77□□□□□ -1
DDX11-223ENST00000542838 ZNF561-AS1K7EIQ3 104 aa8.77□□□□□ -1
DDX11-223ENST00000542838 DEFB135Q30KP9 77 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms