RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 PSCAO43653 123 aa3.95□□□□□ -1.78
XRCC4-206ENST00000542685 KIAA0087Q14695 138 aa3.95□□□□□ -1.78
XRCC4-206ENST00000542685 PRR9Q5T870 116 aa3.95□□□□□ -1.78
XRCC4-206ENST00000542685 LINC00337Q8N6G1 96 aa3.95□□□□□ -1.78
XRCC4-206ENST00000542685 Q8N814 137 aa3.95□□□□□ -1.78
XRCC4-206ENST00000542685 C11orf72Q8NBR9 251 aa3.95□□□□□ -1.78
XRCC4-206ENST00000542685 WFDC9Q8NEX5 89 aa3.95□□□□□ -1.78
XRCC4-206ENST00000542685 CDC42SE1Q9NRR8 79 aa3.95□□□□□ -1.78
XRCC4-206ENST00000542685 USP34Q70CQ2 3546 aa3.95□□□□□ -1.78
XRCC4-206ENST00000542685 CADP27708 2225 aa3.94□□□□□ -1.78
XRCC4-206ENST00000542685 SDK1Q7Z5N4 2213 aa3.94□□□□□ -1.78
XRCC4-206ENST00000542685 TRBV10-1A0A0K0K1A3 114 aa3.94□□□□□ -1.78
XRCC4-206ENST00000542685 GNRH2O43555 120 aa3.94□□□□□ -1.78
XRCC4-206ENST00000542685 IGHV4-31P0DP07 118 aa3.94□□□□□ -1.78
XRCC4-206ENST00000542685 DEFB109BQ30KR1 87 aa3.94□□□□□ -1.78
XRCC4-206ENST00000542685 Q5VV11 94 aa3.94□□□□□ -1.78
XRCC4-206ENST00000542685 C1orf64Q8NEQ6 169 aa3.94□□□□□ -1.78
XRCC4-206ENST00000542685 FAM104AQ969W3 186 aa3.94□□□□□ -1.78
XRCC4-206ENST00000542685 Q9BRP9 147 aa3.94□□□□□ -1.78
XRCC4-206ENST00000542685 CDKN2A-AS1Q9UH64 79 aa3.94□□□□□ -1.78
XRCC4-206ENST00000542685 AHCTF1Q8WYP5 2266 aa3.94□□□□□ -1.78
XRCC4-206ENST00000542685 PLCE1Q9P212 2302 aa3.94□□□□□ -1.78
XRCC4-206ENST00000542685 SVILO95425 2214 aa3.93□□□□□ -1.78
XRCC4-206ENST00000542685 LAMA1P25391 3075 aa3.93□□□□□ -1.78
XRCC4-206ENST00000542685 IGKV2-28A0A075B6P5 120 aa3.93□□□□□ -1.78
XRCC4-206ENST00000542685 IGHV1OR15-1A0A075B7D0 117 aa3.93□□□□□ -1.78
XRCC4-206ENST00000542685 LOC101927531A0A1B0GV80 90 aa3.93□□□□□ -1.78
XRCC4-206ENST00000542685 TRBV6-4A0A1B0GX49 114 aa3.93□□□□□ -1.78
XRCC4-206ENST00000542685 C16orf90A8MZG2 172 aa3.93□□□□□ -1.78
XRCC4-206ENST00000542685 IGKV2D-28P01615 120 aa3.93□□□□□ -1.78
XRCC4-206ENST00000542685 HAMPP81172 84 aa3.93□□□□□ -1.78
XRCC4-206ENST00000542685 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
XRCC4-206ENST00000542685 FAM74A4Q5TZK3 123 aa3.93□□□□□ -1.78
XRCC4-206ENST00000542685 C11orf71Q6IPW1 123 aa3.93□□□□□ -1.78
XRCC4-206ENST00000542685 NTM-AS1Q6ZSK4 140 aa3.93□□□□□ -1.78
XRCC4-206ENST00000542685 USMG5Q96IX5 58 aa3.93□□□□□ -1.78
XRCC4-206ENST00000542685 MUC4Q99102 2169 aa3.93□□□□□ -1.78
XRCC4-206ENST00000542685 IGHV3-38A0A0C4DH36 116 aa3.92□□□□□ -1.78
XRCC4-206ENST00000542685 C5orf56Q8N8D9 126 aa3.92□□□□□ -1.78
XRCC4-206ENST00000542685 SPANXA2-OT1Q8N9U9 137 aa3.92□□□□□ -1.78
XRCC4-206ENST00000542685 MUC7Q8TAX7 377 aa3.92□□□□□ -1.78
XRCC4-206ENST00000542685 ZCCHC13Q8WW36 166 aaKnown RBP3.92□□□□□ -1.78
XRCC4-206ENST00000542685 CHCHD7Q9BUK0 85 aa3.92□□□□□ -1.78
XRCC4-206ENST00000542685 S4R3C0 116 aa3.92□□□□□ -1.78
XRCC4-206ENST00000542685 VCANP13611 3396 aa3.92□□□□□ -1.78
XRCC4-206ENST00000542685 FAM186AA6NE01 2351 aa3.91□□□□□ -1.78
XRCC4-206ENST00000542685 SPTBN5Q9NRC6 3674 aaKnown RBP3.91□□□□□ -1.78
XRCC4-206ENST00000542685 IGHV3-16A0A0C4DH30 117 aa3.91□□□□□ -1.78
XRCC4-206ENST00000542685 HCG22E2RYF7 251 aa3.91□□□□□ -1.78
XRCC4-206ENST00000542685 K7EQG2 157 aa3.91□□□□□ -1.78
XRCC4-206ENST00000542685 PSPHP1O15172 72 aa3.91□□□□□ -1.78
XRCC4-206ENST00000542685 A8MTW9 85 aa3.9□□□□□ -1.79
XRCC4-206ENST00000542685 CHKB-CPT1BH3BT56 60 aa3.9□□□□□ -1.79
XRCC4-206ENST00000542685 K7EQD1 137 aa3.9□□□□□ -1.79
XRCC4-206ENST00000542685 IGHV3-23P01764 117 aa3.9□□□□□ -1.79
XRCC4-206ENST00000542685 LINC00242Q5T6M2 205 aa3.9□□□□□ -1.79
XRCC4-206ENST00000542685 WDFY3Q8IZQ1 3526 aa3.9□□□□□ -1.79
XRCC4-206ENST00000542685 H3BPC8 53 aa3.89□□□□□ -1.79
XRCC4-206ENST00000542685 C19orf84I3L1E1 186 aa3.89□□□□□ -1.79
XRCC4-206ENST00000542685 CCL24O00175 119 aa3.89□□□□□ -1.79
XRCC4-206ENST00000542685 CCL18P55774 89 aa3.89□□□□□ -1.79
XRCC4-206ENST00000542685 LINC01554Q52M75 96 aa3.89□□□□□ -1.79
XRCC4-206ENST00000542685 COX7B2Q8TF08 81 aa3.89□□□□□ -1.79
XRCC4-206ENST00000542685 CDC42SE2Q9NRR3 84 aa3.89□□□□□ -1.79
XRCC4-206ENST00000542685 IGKV4-1P06312 121 aa3.88□□□□□ -1.79
XRCC4-206ENST00000542685 COX7BP24311 80 aa3.88□□□□□ -1.79
XRCC4-206ENST00000542685 Q8N377 158 aa3.88□□□□□ -1.79
XRCC4-206ENST00000542685 LINC00467Q9BRT7 94 aa3.88□□□□□ -1.79
XRCC4-206ENST00000542685 SPEGQ15772 3267 aa3.87□□□□□ -1.79
XRCC4-206ENST00000542685 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.87□□□□□ -1.79
XRCC4-206ENST00000542685 IGHV3OR16-12A0A075B7B8 117 aa3.87□□□□□ -1.79
XRCC4-206ENST00000542685 C3orf84H3BNL1 204 aa3.87□□□□□ -1.79
XRCC4-206ENST00000542685 PRM2P04554 102 aa3.87□□□□□ -1.79
XRCC4-206ENST00000542685 PRB4P10163 310 aaPredicted RBP3.87□□□□□ -1.79
XRCC4-206ENST00000542685 MP68P56378 58 aa3.87□□□□□ -1.79
XRCC4-206ENST00000542685 C9orf116Q5BN46 136 aaPredicted RBP3.87□□□□□ -1.79
XRCC4-206ENST00000542685 LINC00575Q6W349 94 aa3.87□□□□□ -1.79
XRCC4-206ENST00000542685 SPTSSBQ8NFR3 76 aa3.87□□□□□ -1.79
XRCC4-206ENST00000542685 HIGD2AQ9BW72 106 aa3.87□□□□□ -1.79
XRCC4-206ENST00000542685 ZNF318Q5VUA4 2279 aa3.87□□□□□ -1.79
XRCC4-206ENST00000542685 IGHV3OR16-8A0A075B7F1 116 aa3.86□□□□□ -1.79
XRCC4-206ENST00000542685 IGHV3-49A0A0A0MS15 119 aa3.86□□□□□ -1.79
XRCC4-206ENST00000542685 IGHV3-35A0A0C4DH35 117 aa3.86□□□□□ -1.79
XRCC4-206ENST00000542685 A6NED7 52 aa3.86□□□□□ -1.79
XRCC4-206ENST00000542685 LYNX1G3V0Z9 82 aa3.86□□□□□ -1.79
XRCC4-206ENST00000542685 G3V318 75 aa3.86□□□□□ -1.79
XRCC4-206ENST00000542685 CDK2AP2O75956 126 aa3.86□□□□□ -1.79
XRCC4-206ENST00000542685 LYNX1P0DP58 116 aa3.86□□□□□ -1.79
XRCC4-206ENST00000542685 LINC00158P58513 81 aa3.86□□□□□ -1.79
XRCC4-206ENST00000542685 COX17Q14061 63 aa3.86□□□□□ -1.79
XRCC4-206ENST00000542685 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.86□□□□□ -1.79
XRCC4-206ENST00000542685 CASC2Q6XLA1 102 aa3.86□□□□□ -1.79
XRCC4-206ENST00000542685 Q6ZTI0 123 aa3.86□□□□□ -1.79
XRCC4-206ENST00000542685 LINC00612Q8N6U2 182 aa3.86□□□□□ -1.79
XRCC4-206ENST00000542685 DEFB124Q8NES8 71 aa3.86□□□□□ -1.79
XRCC4-206ENST00000542685 PRR34Q9NV39 138 aa3.86□□□□□ -1.79
XRCC4-206ENST00000542685 ABCA1O95477 2261 aa3.85□□□□□ -1.79
XRCC4-206ENST00000542685 IGHV4-30-2A0A087WSY4 118 aa3.85□□□□□ -1.79
XRCC4-206ENST00000542685 IGHV3-66A0A0C4DH42 116 aa3.85□□□□□ -1.79
XRCC4-206ENST00000542685 ETDCA0A1B0GVM5 59 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms