RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 CKS1BP61024 79 aa10.07□□□□□ -0.8
CCND1-205ENST00000542367 KRTAP7-1Q8IUC3 87 aa10.07□□□□□ -0.8
CCND1-205ENST00000542367 Q8IZM0 81 aa10.07□□□□□ -0.8
CCND1-205ENST00000542367 RPS10P5Q9NQ39 176 aa10.07□□□□□ -0.8
CCND1-205ENST00000542367 LINC01546A6NGU7 62 aa10.06□□□□□ -0.8
CCND1-205ENST00000542367 KRTAP10-8P60410 259 aa10.06□□□□□ -0.8
CCND1-205ENST00000542367 FABP9Q0Z7S8 132 aa10.06□□□□□ -0.8
CCND1-205ENST00000542367 KRTAP11-1Q8IUC1 163 aa10.06□□□□□ -0.8
CCND1-205ENST00000542367 MRPL18Q9H0U6 180 aaKnown RBP10.06□□□□□ -0.8
CCND1-205ENST00000542367 CARHSP1Q9Y2V2 147 aaKnown RBP10.06□□□□□ -0.8
CCND1-205ENST00000542367 RHEBQ15382 184 aa10.05□□□□□ -0.8
CCND1-205ENST00000542367 C9orf129Q5T035 196 aaKnown RBP10.05□□□□□ -0.8
CCND1-205ENST00000542367 LINC01549A6NIU2 74 aa10.04□□□□□ -0.8
CCND1-205ENST00000542367 ODF1Q14990 250 aa10.04□□□□□ -0.8
CCND1-205ENST00000542367 FA2HQ7L5A8 372 aa10.04□□□□□ -0.8
CCND1-205ENST00000542367 M0QXV9 152 aa10.03□□□□□ -0.8
CCND1-205ENST00000542367 IGLV7-43P04211 117 aa10.03□□□□□ -0.8
CCND1-205ENST00000542367 LINC00469Q8N7U9 141 aa10.03□□□□□ -0.8
CCND1-205ENST00000542367 SMCO4Q9NRQ5 59 aa10.03□□□□□ -0.8
CCND1-205ENST00000542367 TINCRA0A1B0GVN0 87 aa10.02□□□□□ -0.81
CCND1-205ENST00000542367 CST9LQ9H4G1 147 aa10.02□□□□□ -0.81
CCND1-205ENST00000542367 F8VRH5 84 aa10.01□□□□□ -0.81
CCND1-205ENST00000542367 UBE2BP63146 152 aa10.01□□□□□ -0.81
CCND1-205ENST00000542367 SMIM1B2RUZ4 78 aa10□□□□□ -0.81
CCND1-205ENST00000542367 PMVKQ15126 192 aa10□□□□□ -0.81
CCND1-205ENST00000542367 IGLV5-45A0A087WSX0 123 aa9.99□□□□□ -0.81
CCND1-205ENST00000542367 PDZD11Q5EBL8 140 aa9.99□□□□□ -0.81
CCND1-205ENST00000542367 DIRC1Q969H9 104 aa9.99□□□□□ -0.81
CCND1-205ENST00000542367 XAGE1AQ9HD64 81 aa9.99□□□□□ -0.81
CCND1-205ENST00000542367 TRAPPC1Q9Y5R8 145 aa9.99□□□□□ -0.81
CCND1-205ENST00000542367 CXCL5P42830 114 aa9.98□□□□□ -0.81
CCND1-205ENST00000542367 COX7B2Q8TF08 81 aa9.98□□□□□ -0.81
CCND1-205ENST00000542367 APOC3P02656 99 aa9.97□□□□□ -0.81
CCND1-205ENST00000542367 C22orf24Q9Y442 160 aa9.97□□□□□ -0.81
CCND1-205ENST00000542367 SPINK8P0C7L1 97 aa9.96□□□□□ -0.82
CCND1-205ENST00000542367 LINC00614P0C842 121 aa9.96□□□□□ -0.82
CCND1-205ENST00000542367 C18orf32Q8TCD1 76 aa9.96□□□□□ -0.82
CCND1-205ENST00000542367 URB1-AS1Q96HZ7 61 aa9.96□□□□□ -0.82
CCND1-205ENST00000542367 UBR4Q5T4S7 5183 aa9.96□□□□□ -0.82
CCND1-205ENST00000542367 A0A096LNJ9 63 aa9.95□□□□□ -0.82
CCND1-205ENST00000542367 H0Y9J4 135 aa9.95□□□□□ -0.82
CCND1-205ENST00000542367 SNAPINO95295 136 aa9.94□□□□□ -0.82
CCND1-205ENST00000542367 NDUFA6P56556 154 aa9.94□□□□□ -0.82
CCND1-205ENST00000542367 H3BRM9 83 aa9.93□□□□□ -0.82
CCND1-205ENST00000542367 RAB5BP61020 215 aa9.93□□□□□ -0.82
CCND1-205ENST00000542367 NDUFA5Q16718 116 aa9.93□□□□□ -0.82
CCND1-205ENST00000542367 LBHQ53QV2 105 aaPredicted RBP9.93□□□□□ -0.82
CCND1-205ENST00000542367 SVBPQ8N300 66 aa9.93□□□□□ -0.82
CCND1-205ENST00000542367 HBDP02042 147 aa9.92□□□□□ -0.82
CCND1-205ENST00000542367 IGLC3P0DOY3 106 aa9.92□□□□□ -0.82
CCND1-205ENST00000542367 PMCHL1Q16048 86 aa9.92□□□□□ -0.82
CCND1-205ENST00000542367 PRR26Q8N8Z3 221 aa9.92□□□□□ -0.82
CCND1-205ENST00000542367 NUPR1O60356 82 aa9.9□□□□□ -0.82
CCND1-205ENST00000542367 MRPL55Q7Z7F7 128 aaKnown RBP9.9□□□□□ -0.82
CCND1-205ENST00000542367 TP73-AS1Q9UF72 201 aa9.9□□□□□ -0.82
CCND1-205ENST00000542367 LRP2P98164 4655 aa9.88□□□□□ -0.83
CCND1-205ENST00000542367 ZNF861PO60384 105 aa9.88□□□□□ -0.83
CCND1-205ENST00000542367 ATP5LO75964 103 aa9.88□□□□□ -0.83
CCND1-205ENST00000542367 KRTAP1-4P0C5Y4 121 aa9.88□□□□□ -0.83
CCND1-205ENST00000542367 ZNF22P17026 224 aaPredicted RBP9.88□□□□□ -0.83
CCND1-205ENST00000542367 BAGE3Q86Y29 109 aa9.88□□□□□ -0.83
CCND1-205ENST00000542367 IGLV5-39A0A0G2JS06 123 aa9.87□□□□□ -0.83
CCND1-205ENST00000542367 LINC00167Q96N53 147 aa9.87□□□□□ -0.83
CCND1-205ENST00000542367 RPL37AP8A6NKH3 93 aa9.86□□□□□ -0.83
CCND1-205ENST00000542367 YPEL4Q96NS1 127 aa9.86□□□□□ -0.83
CCND1-205ENST00000542367 IGLV1-50A0A075B6I6 118 aa9.85□□□□□ -0.83
CCND1-205ENST00000542367 C11orf86A6NJI1 115 aa9.85□□□□□ -0.83
CCND1-205ENST00000542367 PFN2P35080 140 aa9.85□□□□□ -0.83
CCND1-205ENST00000542367 GAGE10A6NGK3 116 aa9.84□□□□□ -0.83
CCND1-205ENST00000542367 IGLV5-37A0A075B6J1 123 aa9.83□□□□□ -0.84
CCND1-205ENST00000542367 BCE1O60756 84 aa9.83□□□□□ -0.84
CCND1-205ENST00000542367 TMEM170BQ5T4T1 132 aa9.83□□□□□ -0.84
CCND1-205ENST00000542367 NKAPP1Q8N9T2 125 aa9.83□□□□□ -0.84
CCND1-205ENST00000542367 CHCHD1Q96BP2 118 aaKnown RBP9.82□□□□□ -0.84
CCND1-205ENST00000542367 ZNF625Q96I27 306 aaPredicted RBP9.82□□□□□ -0.84
CCND1-205ENST00000542367 CHTOPQ9Y3Y2 248 aaKnown RBP9.82□□□□□ -0.84
CCND1-205ENST00000542367 RPL28P46779 137 aaKnown RBP9.81□□□□□ -0.84
CCND1-205ENST00000542367 ERG28Q9UKR5 140 aa9.81□□□□□ -0.84
CCND1-205ENST00000542367 SCO1O75880 301 aa9.8□□□□□ -0.84
CCND1-205ENST00000542367 SND1-IT1Q9HBX3 110 aa9.8□□□□□ -0.84
CCND1-205ENST00000542367 RPL13AP40429 203 aaKnown RBP9.79□□□□□ -0.84
CCND1-205ENST00000542367 COX17Q14061 63 aa9.79□□□□□ -0.84
CCND1-205ENST00000542367 CBLN2Q8IUK8 224 aa9.79□□□□□ -0.84
CCND1-205ENST00000542367 IFI27L1Q96BM0 104 aa9.79□□□□□ -0.84
CCND1-205ENST00000542367 IGKV2-28A0A075B6P5 120 aa9.77□□□□□ -0.85
CCND1-205ENST00000542367 TRAV12-1A0A0B4J245 112 aa9.77□□□□□ -0.85
CCND1-205ENST00000542367 IGKV2D-28P01615 120 aa9.77□□□□□ -0.85
CCND1-205ENST00000542367 VPREB1P12018 145 aa9.77□□□□□ -0.85
CCND1-205ENST00000542367 SFTA2Q6UW10 78 aa9.77□□□□□ -0.85
CCND1-205ENST00000542367 LPAP08519 4548 aa9.76□□□□□ -0.85
CCND1-205ENST00000542367 TMEM223A0PJW6 202 aa9.76□□□□□ -0.85
CCND1-205ENST00000542367 HSBP1O75506 76 aa9.76□□□□□ -0.85
CCND1-205ENST00000542367 FAM19A2Q8N3H0 131 aa9.76□□□□□ -0.85
CCND1-205ENST00000542367 UBE2AP49459 152 aa9.75□□□□□ -0.85
CCND1-205ENST00000542367 RPL24P83731 157 aaKnown RBP9.75□□□□□ -0.85
CCND1-205ENST00000542367 TRGC2P03986 189 aa9.74□□□□□ -0.85
CCND1-205ENST00000542367 KRTAP13-1Q8IUC0 172 aa9.74□□□□□ -0.85
CCND1-205ENST00000542367 LINC00158P58513 81 aa9.73□□□□□ -0.85
CCND1-205ENST00000542367 Q8NDZ9 215 aa9.73□□□□□ -0.85
CCND1-205ENST00000542367 A0A087X002 238 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms