RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 NXT2Q9NPJ8 142 aaKnown RBP11.8□□□□□ -0.52
DDX11-220ENST00000542244 SMIM1B2RUZ4 78 aa11.78□□□□□ -0.52
DDX11-220ENST00000542244 NPSP0C0P6 89 aa11.78□□□□□ -0.52
DDX11-220ENST00000542244 HERVK_113P63121 156 aa11.78□□□□□ -0.52
DDX11-220ENST00000542244 TIMM17AQ99595 171 aa11.78□□□□□ -0.52
DDX11-220ENST00000542244 A0A087X002 238 aa11.77□□□□□ -0.53
DDX11-220ENST00000542244 F8VRH5 84 aa11.77□□□□□ -0.53
DDX11-220ENST00000542244 K7EMI3 77 aa11.77□□□□□ -0.53
DDX11-220ENST00000542244 PRR4Q16378 134 aa11.77□□□□□ -0.53
DDX11-220ENST00000542244 GEMIN7Q9H840 131 aaKnown RBP11.77□□□□□ -0.53
DDX11-220ENST00000542244 RPL37AP8A6NKH3 93 aa11.75□□□□□ -0.53
DDX11-220ENST00000542244 SCGB3A1Q96QR1 104 aa11.75□□□□□ -0.53
DDX11-220ENST00000542244 ANAPC11Q9NYG5 84 aa11.75□□□□□ -0.53
DDX11-220ENST00000542244 TSPAN13O95857 204 aa11.74□□□□□ -0.53
DDX11-220ENST00000542244 MRPL55Q7Z7F7 128 aaKnown RBP11.74□□□□□ -0.53
DDX11-220ENST00000542244 LINC00167Q96N53 147 aa11.74□□□□□ -0.53
DDX11-220ENST00000542244 GAGE10A6NGK3 116 aa11.73□□□□□ -0.53
DDX11-220ENST00000542244 NUPR1O60356 82 aa11.73□□□□□ -0.53
DDX11-220ENST00000542244 SCO1O75880 301 aa11.73□□□□□ -0.53
DDX11-220ENST00000542244 SPINK8P0C7L1 97 aa11.73□□□□□ -0.53
DDX11-220ENST00000542244 ERASQ7Z444 233 aa11.73□□□□□ -0.53
DDX11-220ENST00000542244 CARHSP1Q9Y2V2 147 aaKnown RBP11.73□□□□□ -0.53
DDX11-220ENST00000542244 MUC2Q02817 5179 aa11.72□□□□□ -0.53
DDX11-220ENST00000542244 IGLV5-45A0A087WSX0 123 aa11.72□□□□□ -0.53
DDX11-220ENST00000542244 RPL13AP40429 203 aaKnown RBP11.72□□□□□ -0.53
DDX11-220ENST00000542244 RAB14P61106 215 aa11.72□□□□□ -0.53
DDX11-220ENST00000542244 LBHQ53QV2 105 aaPredicted RBP11.72□□□□□ -0.53
DDX11-220ENST00000542244 COX7B2Q8TF08 81 aa11.72□□□□□ -0.53
DDX11-220ENST00000542244 TINCRA0A1B0GVN0 87 aa11.71□□□□□ -0.53
DDX11-220ENST00000542244 RAB5BP61020 215 aa11.71□□□□□ -0.53
DDX11-220ENST00000542244 SEC11AP67812 179 aa11.71□□□□□ -0.53
DDX11-220ENST00000542244 CST9LQ9H4G1 147 aa11.71□□□□□ -0.53
DDX11-220ENST00000542244 TP73-AS1Q9UF72 201 aa11.71□□□□□ -0.53
DDX11-220ENST00000542244 LINC01546A6NGU7 62 aa11.7□□□□□ -0.54
DDX11-220ENST00000542244 BCE1O60756 84 aa11.7□□□□□ -0.54
DDX11-220ENST00000542244 PDZD11Q5EBL8 140 aa11.7□□□□□ -0.54
DDX11-220ENST00000542244 CLLU1Q5K131 121 aa11.7□□□□□ -0.54
DDX11-220ENST00000542244 PAPPA-AS1Q5QFB9 102 aa11.7□□□□□ -0.54
DDX11-220ENST00000542244 LCE2DQ5TA82 110 aaPredicted RBP11.69□□□□□ -0.54
DDX11-220ENST00000542244 TMEM218A2RU14 115 aa11.67□□□□□ -0.54
DDX11-220ENST00000542244 CXCL5P42830 114 aa11.67□□□□□ -0.54
DDX11-220ENST00000542244 IFITM2Q01629 132 aa11.67□□□□□ -0.54
DDX11-220ENST00000542244 KRTAP13-2Q52LG2 175 aa11.67□□□□□ -0.54
DDX11-220ENST00000542244 KRTAP13-1Q8IUC0 172 aa11.67□□□□□ -0.54
DDX11-220ENST00000542244 G0S2P27469 103 aa11.65□□□□□ -0.54
DDX11-220ENST00000542244 RPL28P46779 137 aaKnown RBP11.65□□□□□ -0.54
DDX11-220ENST00000542244 IGLV5-37A0A075B6J1 123 aa11.64□□□□□ -0.55
DDX11-220ENST00000542244 GNB1LQ9BYB4 327 aa11.64□□□□□ -0.55
DDX11-220ENST00000542244 A0A096LNJ9 63 aa11.63□□□□□ -0.55
DDX11-220ENST00000542244 PMVKQ15126 192 aa11.63□□□□□ -0.55
DDX11-220ENST00000542244 Q8NDZ9 215 aa11.63□□□□□ -0.55
DDX11-220ENST00000542244 URB1-AS1Q96HZ7 61 aa11.63□□□□□ -0.55
DDX11-220ENST00000542244 TRAV9-1A0A075B6T8 112 aa11.62□□□□□ -0.55
DDX11-220ENST00000542244 TYMSOSQ8TAI1 123 aa11.62□□□□□ -0.55
DDX11-220ENST00000542244 IGKV2-28A0A075B6P5 120 aa11.61□□□□□ -0.55
DDX11-220ENST00000542244 IGKV2D-28P01615 120 aa11.61□□□□□ -0.55
DDX11-220ENST00000542244 CRYGAP11844 174 aa11.61□□□□□ -0.55
DDX11-220ENST00000542244 MRPL18Q9H0U6 180 aaKnown RBP11.61□□□□□ -0.55
DDX11-220ENST00000542244 PFN2P35080 140 aa11.6□□□□□ -0.55
DDX11-220ENST00000542244 UQCC3Q6UW78 93 aa11.59□□□□□ -0.55
DDX11-220ENST00000542244 FA2HQ7L5A8 372 aa11.59□□□□□ -0.55
DDX11-220ENST00000542244 RETNLBQ9BQ08 111 aa11.59□□□□□ -0.55
DDX11-220ENST00000542244 IGLV5-39A0A0G2JS06 123 aa11.58□□□□□ -0.56
DDX11-220ENST00000542244 TMEM238C9JI98 176 aa11.58□□□□□ -0.56
DDX11-220ENST00000542244 IGLC3P0DOY3 106 aa11.58□□□□□ -0.56
DDX11-220ENST00000542244 ZNF22P17026 224 aaPredicted RBP11.58□□□□□ -0.56
DDX11-220ENST00000542244 PRLHP81277 87 aa11.58□□□□□ -0.56
DDX11-220ENST00000542244 FABP9Q0Z7S8 132 aa11.58□□□□□ -0.56
DDX11-220ENST00000542244 VPREB1P12018 145 aa11.57□□□□□ -0.56
DDX11-220ENST00000542244 UBE2AP49459 152 aa11.57□□□□□ -0.56
DDX11-220ENST00000542244 PMCHL1Q16048 86 aa11.57□□□□□ -0.56
DDX11-220ENST00000542244 NKAPP1Q8N9T2 125 aa11.57□□□□□ -0.56
DDX11-220ENST00000542244 SEC11CQ9BY50 192 aa11.57□□□□□ -0.56
DDX11-220ENST00000542244 S100PP25815 95 aa11.56□□□□□ -0.56
DDX11-220ENST00000542244 ZNF625Q96I27 306 aaPredicted RBP11.56□□□□□ -0.56
DDX11-220ENST00000542244 SND1-IT1Q9HBX3 110 aa11.56□□□□□ -0.56
DDX11-220ENST00000542244 ATP5LO75964 103 aa11.55□□□□□ -0.56
DDX11-220ENST00000542244 NDUFA6P56556 154 aa11.55□□□□□ -0.56
DDX11-220ENST00000542244 SMCO4Q9NRQ5 59 aa11.55□□□□□ -0.56
DDX11-220ENST00000542244 H3BRM9 83 aa11.53□□□□□ -0.56
DDX11-220ENST00000542244 COMMD7Q86VX2 200 aa11.53□□□□□ -0.56
DDX11-220ENST00000542244 ERG28Q9UKR5 140 aa11.53□□□□□ -0.56
DDX11-220ENST00000542244 LINC01549A6NIU2 74 aa11.52□□□□□ -0.57
DDX11-220ENST00000542244 C18orf32Q8TCD1 76 aa11.52□□□□□ -0.57
DDX11-220ENST00000542244 C11orf86A6NJI1 115 aa11.51□□□□□ -0.57
DDX11-220ENST00000542244 M0R378 163 aa11.51□□□□□ -0.57
DDX11-220ENST00000542244 C10orf91Q5T1B1 145 aa11.51□□□□□ -0.57
DDX11-220ENST00000542244 TMEM126AQ9H061 195 aa11.51□□□□□ -0.57
DDX11-220ENST00000542244 RPS10P5Q9NQ39 176 aa11.51□□□□□ -0.57
DDX11-220ENST00000542244 FAM19A1Q7Z5A9 133 aa11.5□□□□□ -0.57
DDX11-220ENST00000542244 FAM229BQ4G0N7 80 aa11.49□□□□□ -0.57
DDX11-220ENST00000542244 C3orf22Q8N5N4 141 aa11.49□□□□□ -0.57
DDX11-220ENST00000542244 LINC00304Q8N9R0 145 aa11.49□□□□□ -0.57
DDX11-220ENST00000542244 LINC00614P0C842 121 aa11.48□□□□□ -0.57
DDX11-220ENST00000542244 COX19Q49B96 90 aa11.48□□□□□ -0.57
DDX11-220ENST00000542244 MUC17Q685J3 4493 aa11.47□□□□□ -0.57
DDX11-220ENST00000542244 HBDP02042 147 aa11.46□□□□□ -0.57
DDX11-220ENST00000542244 BAGE3Q86Y29 109 aa11.46□□□□□ -0.57
DDX11-220ENST00000542244 PLEKHB2Q96CS7 222 aa11.46□□□□□ -0.57
DDX11-220ENST00000542244 TRAPPC1Q9Y5R8 145 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms