RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 H3BNG1 76 aa11.69□□□□□ -0.54
TMEM50B-210ENST00000542230 CIRBPQ14011 172 aaKnown RBP11.69□□□□□ -0.54
TMEM50B-210ENST00000542230 CD164L2Q6UWJ8 174 aa11.69□□□□□ -0.54
TMEM50B-210ENST00000542230 PRKDCP78527 4128 aaKnown RBP11.68□□□□□ -0.54
TMEM50B-210ENST00000542230 FOXI1Q12951 378 aa11.68□□□□□ -0.54
TMEM50B-210ENST00000542230 C6orf226Q5I0X4 101 aa11.68□□□□□ -0.54
TMEM50B-210ENST00000542230 CSMD3Q7Z407 3707 aa11.68□□□□□ -0.54
TMEM50B-210ENST00000542230 A0A0B4J2C4 111 aa11.68□□□□□ -0.54
TMEM50B-210ENST00000542230 LINC00526Q96FQ7 95 aa11.68□□□□□ -0.54
TMEM50B-210ENST00000542230 PFN2P35080 140 aa11.67□□□□□ -0.54
TMEM50B-210ENST00000542230 HERV-K104P63124 156 aa11.67□□□□□ -0.54
TMEM50B-210ENST00000542230 UBE2WQ96B02 151 aa11.67□□□□□ -0.54
TMEM50B-210ENST00000542230 PRR34Q9NV39 138 aa11.67□□□□□ -0.54
TMEM50B-210ENST00000542230 GAGE12HA6NDE8 117 aa11.67□□□□□ -0.54
TMEM50B-210ENST00000542230 COX7A2LO14548 114 aa11.67□□□□□ -0.54
TMEM50B-210ENST00000542230 MIR7-3HGQ8N6C7 128 aa11.67□□□□□ -0.54
TMEM50B-210ENST00000542230 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.65□□□□□ -0.54
TMEM50B-210ENST00000542230 KIAA0087Q14695 138 aa11.65□□□□□ -0.54
TMEM50B-210ENST00000542230 ERG28Q9UKR5 140 aa11.65□□□□□ -0.54
TMEM50B-210ENST00000542230 IFITM1P13164 125 aa11.64□□□□□ -0.55
TMEM50B-210ENST00000542230 LINC00158P58513 81 aa11.64□□□□□ -0.55
TMEM50B-210ENST00000542230 C6orf223Q8N319 242 aa11.64□□□□□ -0.55
TMEM50B-210ENST00000542230 MEGF8Q7Z7M0 2845 aa11.64□□□□□ -0.55
TMEM50B-210ENST00000542230 MALP21145 153 aa11.63□□□□□ -0.55
TMEM50B-210ENST00000542230 PSMB2P49721 201 aa11.63□□□□□ -0.55
TMEM50B-210ENST00000542230 Q1RN00 199 aa11.63□□□□□ -0.55
TMEM50B-210ENST00000542230 C9orf116Q5BN46 136 aaPredicted RBP11.63□□□□□ -0.55
TMEM50B-210ENST00000542230 Q8IZM0 81 aa11.63□□□□□ -0.55
TMEM50B-210ENST00000542230 TCL1BO95988 128 aa11.62□□□□□ -0.55
TMEM50B-210ENST00000542230 WFDC2Q14508 124 aa11.61□□□□□ -0.55
TMEM50B-210ENST00000542230 DNAH7Q8WXX0 4024 aa11.6□□□□□ -0.55
TMEM50B-210ENST00000542230 TRAV10A0A0B4J240 114 aa11.6□□□□□ -0.55
TMEM50B-210ENST00000542230 TRIAP1O43715 76 aa11.6□□□□□ -0.55
TMEM50B-210ENST00000542230 SCGB1C2P0DMR2 95 aa11.6□□□□□ -0.55
TMEM50B-210ENST00000542230 RPL13AP40429 203 aaKnown RBP11.6□□□□□ -0.55
TMEM50B-210ENST00000542230 C10orf25Q5T742 122 aa11.6□□□□□ -0.55
TMEM50B-210ENST00000542230 DNAH1Q9P2D7 4330 aa11.59□□□□□ -0.55
TMEM50B-210ENST00000542230 CRPP02741 224 aa11.59□□□□□ -0.55
TMEM50B-210ENST00000542230 IBA57-AS1B1ANH7 110 aa11.59□□□□□ -0.55
TMEM50B-210ENST00000542230 CCL18P55774 89 aa11.59□□□□□ -0.55
TMEM50B-210ENST00000542230 CKS1BP61024 79 aa11.59□□□□□ -0.55
TMEM50B-210ENST00000542230 PRO0461Q9UI25 63 aa11.59□□□□□ -0.55
TMEM50B-210ENST00000542230 LINC01561Q8N1V8 128 aa11.57□□□□□ -0.56
TMEM50B-210ENST00000542230 LINC00588Q9Y4M8 146 aa11.57□□□□□ -0.56
TMEM50B-210ENST00000542230 KRTAP26-1Q6PEX3 210 aa11.57□□□□□ -0.56
TMEM50B-210ENST00000542230 UNQ6190/PRO20217Q6UXQ8 127 aa11.57□□□□□ -0.56
TMEM50B-210ENST00000542230 IGKV2-28A0A075B6P5 120 aa11.56□□□□□ -0.56
TMEM50B-210ENST00000542230 IGKV2D-28P01615 120 aa11.56□□□□□ -0.56
TMEM50B-210ENST00000542230 CFAP161Q6P656 301 aa11.56□□□□□ -0.56
TMEM50B-210ENST00000542230 PLECQ15149 4684 aaKnown RBP11.55□□□□□ -0.56
TMEM50B-210ENST00000542230 SMCPP49901 116 aaPredicted RBP11.55□□□□□ -0.56
TMEM50B-210ENST00000542230 SPAG11BQ08648 103 aa11.55□□□□□ -0.56
TMEM50B-210ENST00000542230 SND1-IT1Q9HBX3 110 aa11.55□□□□□ -0.56
TMEM50B-210ENST00000542230 DNAH10Q8IVF4 4471 aa11.55□□□□□ -0.56
TMEM50B-210ENST00000542230 LINC00337Q8N6G1 96 aa11.54□□□□□ -0.56
TMEM50B-210ENST00000542230 KLK5Q9Y337 293 aaPredicted RBP11.54□□□□□ -0.56
TMEM50B-210ENST00000542230 LINC01556Q5JQF7 62 aa11.54□□□□□ -0.56
TMEM50B-210ENST00000542230 HIGD2BQ4VC39 106 aa11.53□□□□□ -0.56
TMEM50B-210ENST00000542230 OCIAD2Q56VL3 154 aa11.53□□□□□ -0.56
TMEM50B-210ENST00000542230 CLEC2BQ92478 149 aa11.53□□□□□ -0.56
TMEM50B-210ENST00000542230 TRBV30A0A0K0K1B3 111 aa11.53□□□□□ -0.56
TMEM50B-210ENST00000542230 PRR3P79522 188 aaKnown RBP11.53□□□□□ -0.56
TMEM50B-210ENST00000542230 Q9HAA7 133 aa11.53□□□□□ -0.56
TMEM50B-210ENST00000542230 TRAV8-4A0A0B4J246 113 aa11.52□□□□□ -0.57
TMEM50B-210ENST00000542230 DYNC2H1Q8NCM8 4307 aaKnown RBP11.52□□□□□ -0.57
TMEM50B-210ENST00000542230 ETDBQ3ZM63 59 aa11.52□□□□□ -0.57
TMEM50B-210ENST00000542230 F8W1H4 67 aa11.51□□□□□ -0.57
TMEM50B-210ENST00000542230 Q8NDZ9 215 aa11.5□□□□□ -0.57
TMEM50B-210ENST00000542230 C15orf53Q8NAA6 179 aa11.5□□□□□ -0.57
TMEM50B-210ENST00000542230 IGKV2D-24A0A075B6R9 120 aa11.49□□□□□ -0.57
TMEM50B-210ENST00000542230 COPS9Q8WXC6 57 aa11.49□□□□□ -0.57
TMEM50B-210ENST00000542230 B9D2Q9BPU9 175 aa11.49□□□□□ -0.57
TMEM50B-210ENST00000542230 TRBV20-1A0A075B6N2 111 aa11.49□□□□□ -0.57
TMEM50B-210ENST00000542230 DNAH10OSP0CZ25 163 aa11.49□□□□□ -0.57
TMEM50B-210ENST00000542230 LYRM7Q5U5X0 104 aa11.48□□□□□ -0.57
TMEM50B-210ENST00000542230 STARD9Q9P2P6 4700 aa11.48□□□□□ -0.57
TMEM50B-210ENST00000542230 C15orf56Q8N910 161 aa11.48□□□□□ -0.57
TMEM50B-210ENST00000542230 CXCL5P42830 114 aa11.47□□□□□ -0.57
TMEM50B-210ENST00000542230 CASC10Q5T4H9 136 aa11.47□□□□□ -0.57
TMEM50B-210ENST00000542230 NTN5Q8WTR8 489 aaPredicted RBP11.47□□□□□ -0.57
TMEM50B-210ENST00000542230 C1orf43Q9BWL3 253 aa11.47□□□□□ -0.57
TMEM50B-210ENST00000542230 C6orf48Q9UBA6 75 aa11.47□□□□□ -0.57
TMEM50B-210ENST00000542230 C9JAW5 83 aa11.46□□□□□ -0.57
TMEM50B-210ENST00000542230 PPDPFQ9H3Y8 114 aa11.45□□□□□ -0.58
TMEM50B-210ENST00000542230 RNF151Q2KHN1 245 aa11.45□□□□□ -0.58
TMEM50B-210ENST00000542230 COX17Q14061 63 aa11.43□□□□□ -0.58
TMEM50B-210ENST00000542230 ATXN8Q156A1 80 aa11.43□□□□□ -0.58
TMEM50B-210ENST00000542230 LINC01620Q4KN68 170 aa11.43□□□□□ -0.58
TMEM50B-210ENST00000542230 TRAV13-2A0A0B4J235 113 aa11.42□□□□□ -0.58
TMEM50B-210ENST00000542230 ZNF561-AS1K7EIQ3 104 aa11.42□□□□□ -0.58
TMEM50B-210ENST00000542230 SMIM11BQ8TCY0 68 aa11.42□□□□□ -0.58
TMEM50B-210ENST00000542230 COX6CP09669 75 aa11.42□□□□□ -0.58
TMEM50B-210ENST00000542230 OR13C6PQ8NH95 151 aa11.42□□□□□ -0.58
TMEM50B-210ENST00000542230 FAM218AQ96MZ4 157 aa11.42□□□□□ -0.58
TMEM50B-210ENST00000542230 Q6ZRU5 148 aa11.41□□□□□ -0.58
TMEM50B-210ENST00000542230 XAGE1AQ9HD64 81 aa11.41□□□□□ -0.58
TMEM50B-210ENST00000542230 SLC25A20O43772 301 aa11.41□□□□□ -0.58
TMEM50B-210ENST00000542230 TGP01266 2768 aa11.4□□□□□ -0.58
TMEM50B-210ENST00000542230 LST1O00453 97 aa11.4□□□□□ -0.58
TMEM50B-210ENST00000542230 CAMK2N2Q96S95 79 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms