RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 NUP188Q5SRE5 1749 aa1.43□□□□□ -2.18
LEMD3-204ENST00000542032 CRYBG1Q9Y4K1 1723 aa1.43□□□□□ -2.18
LEMD3-204ENST00000542032 EEA1Q15075 1411 aa1.43□□□□□ -2.18
LEMD3-204ENST00000542032 A0A1B0GUT8 65 aa1.43□□□□□ -2.18
LEMD3-204ENST00000542032 H3BVH4 76 aa1.43□□□□□ -2.18
LEMD3-204ENST00000542032 SFTA3P0C7M3 94 aa1.43□□□□□ -2.18
LEMD3-204ENST00000542032 SPINK7P58062 85 aa1.43□□□□□ -2.18
LEMD3-204ENST00000542032 C10orf113Q5VZT2 155 aa1.43□□□□□ -2.18
LEMD3-204ENST00000542032 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.43□□□□□ -2.18
LEMD3-204ENST00000542032 Q6ZRX8 168 aa1.43□□□□□ -2.18
LEMD3-204ENST00000542032 PLAC4Q8WY50 150 aa1.43□□□□□ -2.18
LEMD3-204ENST00000542032 TOP2AP11388 1531 aaKnown RBP1.43□□□□□ -2.18
LEMD3-204ENST00000542032 CACNA1GO43497 2377 aa1.43□□□□□ -2.18
LEMD3-204ENST00000542032 SHPRHQ149N8 1683 aa1.42□□□□□ -2.18
LEMD3-204ENST00000542032 BAHCC1Q9P281 2608 aa1.42□□□□□ -2.18
LEMD3-204ENST00000542032 A0A096LNT2 108 aa1.42□□□□□ -2.18
LEMD3-204ENST00000542032 SMIM11BQ8TCY0 68 aa1.42□□□□□ -2.18
LEMD3-204ENST00000542032 ITSN1Q15811 1721 aa1.42□□□□□ -2.18
LEMD3-204ENST00000542032 COL4A1P02462 1669 aa1.42□□□□□ -2.18
LEMD3-204ENST00000542032 ASXL1Q8IXJ9 1541 aa1.41□□□□□ -2.18
LEMD3-204ENST00000542032 GVQW2A0A096LPI5 108 aaPredicted RBP1.41□□□□□ -2.18
LEMD3-204ENST00000542032 TRBV7-4A0A0J9YYF1 115 aa1.41□□□□□ -2.18
LEMD3-204ENST00000542032 S100A3P33764 101 aa1.41□□□□□ -2.18
LEMD3-204ENST00000542032 KRTAP12-1P59990 96 aa1.41□□□□□ -2.18
LEMD3-204ENST00000542032 SPINK13Q1W4C9 94 aa1.41□□□□□ -2.18
LEMD3-204ENST00000542032 LINC00575Q6W349 94 aa1.41□□□□□ -2.18
LEMD3-204ENST00000542032 ABCC8Q09428 1581 aa1.41□□□□□ -2.18
LEMD3-204ENST00000542032 ABCA1O95477 2261 aa1.41□□□□□ -2.18
LEMD3-204ENST00000542032 MYO7AQ13402 2215 aa1.4□□□□□ -2.18
LEMD3-204ENST00000542032 NKTRP30414 1462 aaKnown RBP1.4□□□□□ -2.19
LEMD3-204ENST00000542032 ATP7BP35670 1465 aa1.4□□□□□ -2.19
LEMD3-204ENST00000542032 LY6G6CO95867 125 aa1.4□□□□□ -2.19
LEMD3-204ENST00000542032 C3orf79P0CE67 100 aa1.4□□□□□ -2.19
LEMD3-204ENST00000542032 GNG13Q9P2W3 67 aa1.4□□□□□ -2.19
LEMD3-204ENST00000542032 C5P01031 1676 aa1.39□□□□□ -2.19
LEMD3-204ENST00000542032 C1orf167Q5SNV9 1468 aa1.39□□□□□ -2.19
LEMD3-204ENST00000542032 PRXQ9BXM0 1461 aa1.39□□□□□ -2.19
LEMD3-204ENST00000542032 MAP2P11137 1827 aaKnown RBP1.39□□□□□ -2.19
LEMD3-204ENST00000542032 G3V318 75 aa1.39□□□□□ -2.19
LEMD3-204ENST00000542032 HAMPP81172 84 aa1.39□□□□□ -2.19
LEMD3-204ENST00000542032 SMIM5Q71RC9 77 aa1.39□□□□□ -2.19
LEMD3-204ENST00000542032 KIF21BO75037 1637 aa1.39□□□□□ -2.19
LEMD3-204ENST00000542032 TARBP1Q13395 1621 aaKnown RBP1.39□□□□□ -2.19
LEMD3-204ENST00000542032 BIVM-ERCC5R4GMW8 1640 aa1.39□□□□□ -2.19
LEMD3-204ENST00000542032 URB2Q14146 1524 aaKnown RBP1.39□□□□□ -2.19
LEMD3-204ENST00000542032 LRRC37A2A6NM11 1700 aa1.38□□□□□ -2.19
LEMD3-204ENST00000542032 ASCC3Q8N3C0 2202 aaKnown RBP1.38□□□□□ -2.19
LEMD3-204ENST00000542032 PIK3C2BO00750 1634 aa1.38□□□□□ -2.19
LEMD3-204ENST00000542032 TRAV21A0A0B4J279 112 aa1.38□□□□□ -2.19
LEMD3-204ENST00000542032 TRBV6-1A0A0K0K1D8 114 aa1.38□□□□□ -2.19
LEMD3-204ENST00000542032 IFI6P09912 130 aa1.38□□□□□ -2.19
LEMD3-204ENST00000542032 ATXN8Q156A1 80 aa1.38□□□□□ -2.19
LEMD3-204ENST00000542032 PKD1L3Q7Z443 1732 aa1.37□□□□□ -2.19
LEMD3-204ENST00000542032 NHSL1Q5SYE7 1610 aa1.37□□□□□ -2.19
LEMD3-204ENST00000542032 OTOGLQ3ZCN5 2332 aa1.37□□□□□ -2.19
LEMD3-204ENST00000542032 PIN1P1O15428 100 aa1.37□□□□□ -2.19
LEMD3-204ENST00000542032 NDUFB1O75438 58 aa1.37□□□□□ -2.19
LEMD3-204ENST00000542032 F5P12259 2224 aa1.37□□□□□ -2.19
LEMD3-204ENST00000542032 CEP170BQ9Y4F5 1589 aaPredicted RBP1.37□□□□□ -2.19
LEMD3-204ENST00000542032 UBR3Q6ZT12 1888 aa1.37□□□□□ -2.19
LEMD3-204ENST00000542032 CD163L1Q9NR16 1453 aa1.37□□□□□ -2.19
LEMD3-204ENST00000542032 ABCA9Q8IUA7 1624 aa1.37□□□□□ -2.19
LEMD3-204ENST00000542032 ALKQ9UM73 1620 aa1.37□□□□□ -2.19
LEMD3-204ENST00000542032 FXYD6-FXYD2A0A087WZ82 144 aa1.36□□□□□ -2.19
LEMD3-204ENST00000542032 A0A1B0GU69 56 aa1.36□□□□□ -2.19
LEMD3-204ENST00000542032 SSC5DA1L4H1 1573 aa1.36□□□□□ -2.19
LEMD3-204ENST00000542032 PRB1P04280 392 aa1.36□□□□□ -2.19
LEMD3-204ENST00000542032 RPL37P61927 97 aaKnown RBP1.36□□□□□ -2.19
LEMD3-204ENST00000542032 DEFB112Q30KQ8 113 aa1.36□□□□□ -2.19
LEMD3-204ENST00000542032 CDC42BPGQ6DT37 1551 aa1.36□□□□□ -2.19
LEMD3-204ENST00000542032 WFDC9Q8NEX5 89 aa1.36□□□□□ -2.19
LEMD3-204ENST00000542032 ZFHX3Q15911 3703 aa1.35□□□□□ -2.19
LEMD3-204ENST00000542032 PAPPA2Q9BXP8 1791 aa1.35□□□□□ -2.19
LEMD3-204ENST00000542032 HMGA1P17096 107 aaKnown RBP1.35□□□□□ -2.19
LEMD3-204ENST00000542032 SSBP3-AS1Q7Z2R9 100 aa1.35□□□□□ -2.19
LEMD3-204ENST00000542032 GAFA1Q96PS6 74 aa1.35□□□□□ -2.19
LEMD3-204ENST00000542032 PREX2Q70Z35 1606 aa1.35□□□□□ -2.19
LEMD3-204ENST00000542032 PLCH1Q4KWH8 1693 aa1.35□□□□□ -2.19
LEMD3-204ENST00000542032 PREX1Q8TCU6 1659 aa1.35□□□□□ -2.19
LEMD3-204ENST00000542032 CACNA1CQ13936 2221 aa1.35□□□□□ -2.19
LEMD3-204ENST00000542032 ABCA10Q8WWZ4 1543 aa1.35□□□□□ -2.19
LEMD3-204ENST00000542032 XRN1Q8IZH2 1706 aaKnown RBP1.35□□□□□ -2.19
LEMD3-204ENST00000542032 TIAM1Q13009 1591 aa1.34□□□□□ -2.19
LEMD3-204ENST00000542032 SAMD9Q5K651 1589 aa1.34□□□□□ -2.19
LEMD3-204ENST00000542032 LRP6O75581 1613 aa1.34□□□□□ -2.19
LEMD3-204ENST00000542032 FAM103A1Q9BTL3 118 aaKnown RBP1.34□□□□□ -2.19
LEMD3-204ENST00000542032 ZNF831Q5JPB2 1677 aa1.34□□□□□ -2.19
LEMD3-204ENST00000542032 PLXNB2O15031 1838 aa1.33□□□□□ -2.2
LEMD3-204ENST00000542032 CACNA1BQ00975 2339 aa1.33□□□□□ -2.2
LEMD3-204ENST00000542032 TIAM2Q8IVF5 1701 aa1.33□□□□□ -2.2
LEMD3-204ENST00000542032 LINC00959A0A1B0GUT2 108 aa1.33□□□□□ -2.2
LEMD3-204ENST00000542032 NREPQ16612 68 aa1.33□□□□□ -2.2
LEMD3-204ENST00000542032 DEFB119Q8N690 84 aa1.33□□□□□ -2.2
LEMD3-204ENST00000542032 LMTK2Q8IWU2 1503 aa1.33□□□□□ -2.2
LEMD3-204ENST00000542032 PLXNC1O60486 1568 aa1.33□□□□□ -2.2
LEMD3-204ENST00000542032 DIP2AQ14689 1571 aa1.33□□□□□ -2.2
LEMD3-204ENST00000542032 CADP27708 2225 aa1.32□□□□□ -2.2
LEMD3-204ENST00000542032 KIAA0556O60303 1618 aa1.32□□□□□ -2.2
LEMD3-204ENST00000542032 NESP48681 1621 aa1.32□□□□□ -2.2
LEMD3-204ENST00000542032 PAPPAQ13219 1627 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms