RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 RETNQ9HD89 108 aa10.49□□□□□ -0.73
VARS2-211ENST00000541562 CELA1Q9UNI1 258 aa10.49□□□□□ -0.73
VARS2-211ENST00000541562 CCL18P55774 89 aa10.49□□□□□ -0.73
VARS2-211ENST00000541562 LECT2O14960 151 aa10.48□□□□□ -0.73
VARS2-211ENST00000541562 CSMD3Q7Z407 3707 aa10.48□□□□□ -0.73
VARS2-211ENST00000541562 TRAV25A0A0B4J276 109 aa10.47□□□□□ -0.73
VARS2-211ENST00000541562 IGLV5-39A0A0G2JS06 123 aa10.47□□□□□ -0.73
VARS2-211ENST00000541562 TRBV10-1A0A0K0K1A3 114 aa10.47□□□□□ -0.73
VARS2-211ENST00000541562 PRB2P02812 416 aaPredicted RBP10.47□□□□□ -0.73
VARS2-211ENST00000541562 C14orf132Q9NPU4 83 aa10.47□□□□□ -0.73
VARS2-211ENST00000541562 NCR3O14931 201 aa10.47□□□□□ -0.73
VARS2-211ENST00000541562 SMIM11BQ8TCY0 68 aa10.47□□□□□ -0.73
VARS2-211ENST00000541562 LINC00959A0A1B0GUT2 108 aa10.46□□□□□ -0.73
VARS2-211ENST00000541562 SBSPONQ8IVN8 264 aa10.46□□□□□ -0.73
VARS2-211ENST00000541562 KMT2BQ9UMN6 2715 aaPredicted RBP10.46□□□□□ -0.74
VARS2-211ENST00000541562 IGKV2-28A0A075B6P5 120 aa10.46□□□□□ -0.74
VARS2-211ENST00000541562 CCDC179H3BU77 68 aa10.46□□□□□ -0.74
VARS2-211ENST00000541562 IGKV2D-28P01615 120 aa10.46□□□□□ -0.74
VARS2-211ENST00000541562 MALP21145 153 aa10.46□□□□□ -0.74
VARS2-211ENST00000541562 DNAL4O96015 105 aa10.45□□□□□ -0.74
VARS2-211ENST00000541562 OXLD1Q5BKU9 147 aa10.45□□□□□ -0.74
VARS2-211ENST00000541562 HILS1P60008 231 aa10.45□□□□□ -0.74
VARS2-211ENST00000541562 DAD1P61803 113 aa10.44□□□□□ -0.74
VARS2-211ENST00000541562 IL17DQ8TAD2 202 aa10.44□□□□□ -0.74
VARS2-211ENST00000541562 KLK12Q9UKR0 248 aa10.44□□□□□ -0.74
VARS2-211ENST00000541562 IGKV3D-7A0A0C4DH55 119 aa10.43□□□□□ -0.74
VARS2-211ENST00000541562 TRBV6-4A0A1B0GX49 114 aa10.43□□□□□ -0.74
VARS2-211ENST00000541562 COX7A2LO14548 114 aa10.43□□□□□ -0.74
VARS2-211ENST00000541562 TMEM86BQ8N661 226 aa10.43□□□□□ -0.74
VARS2-211ENST00000541562 IGLV5-45A0A087WSX0 123 aa10.43□□□□□ -0.74
VARS2-211ENST00000541562 IFITM1P13164 125 aa10.43□□□□□ -0.74
VARS2-211ENST00000541562 IGHV3OR16-9A0A0B4J2B5 98 aa10.42□□□□□ -0.74
VARS2-211ENST00000541562 IGHV4-28A0A0C4DH34 117 aa10.42□□□□□ -0.74
VARS2-211ENST00000541562 EDA2RQ9HAV5 297 aa10.41□□□□□ -0.74
VARS2-211ENST00000541562 XAGE1AQ9HD64 81 aa10.41□□□□□ -0.74
VARS2-211ENST00000541562 X6R8D5 127 aa10.41□□□□□ -0.74
VARS2-211ENST00000541562 TENM2Q9NT68 2774 aa10.41□□□□□ -0.74
VARS2-211ENST00000541562 SS18Q15532 418 aa10.4□□□□□ -0.74
VARS2-211ENST00000541562 HIGD2BQ4VC39 106 aa10.39□□□□□ -0.75
VARS2-211ENST00000541562 C10orf25Q5T742 122 aa10.39□□□□□ -0.75
VARS2-211ENST00000541562 SMCR5Q8TEV8 140 aa10.39□□□□□ -0.75
VARS2-211ENST00000541562 WFDC9Q8NEX5 89 aa10.39□□□□□ -0.75
VARS2-211ENST00000541562 NDUFV3P56181 108 aaKnown RBP10.39□□□□□ -0.75
VARS2-211ENST00000541562 CHCHD10Q8WYQ3 142 aaPredicted RBP10.39□□□□□ -0.75
VARS2-211ENST00000541562 CFAP161Q6P656 301 aa10.38□□□□□ -0.75
VARS2-211ENST00000541562 UNQ6190/PRO20217Q6UXQ8 127 aa10.38□□□□□ -0.75
VARS2-211ENST00000541562 PRO0255Q9UI72 69 aa10.38□□□□□ -0.75
VARS2-211ENST00000541562 SDIM1Q6ZPB5 146 aa10.38□□□□□ -0.75
VARS2-211ENST00000541562 FAM236AA0A1B0GUQ0 79 aa10.37□□□□□ -0.75
VARS2-211ENST00000541562 FAM236BA0A1B0GV22 79 aa10.37□□□□□ -0.75
VARS2-211ENST00000541562 NHLRC4P0CG21 123 aaPredicted RBP10.37□□□□□ -0.75
VARS2-211ENST00000541562 REG3AQ06141 175 aa10.36□□□□□ -0.75
VARS2-211ENST00000541562 H3BT86 120 aa10.36□□□□□ -0.75
VARS2-211ENST00000541562 A0A087WVE0 104 aa10.35□□□□□ -0.75
VARS2-211ENST00000541562 TIMM17BO60830 172 aa10.35□□□□□ -0.75
VARS2-211ENST00000541562 OVOL2Q9BRP0 275 aa10.35□□□□□ -0.75
VARS2-211ENST00000541562 HERV-K104P63124 156 aa10.35□□□□□ -0.75
VARS2-211ENST00000541562 CSDC2Q9Y534 153 aaKnown RBP10.35□□□□□ -0.75
VARS2-211ENST00000541562 SHISA2Q6UWI4 295 aa10.34□□□□□ -0.75
VARS2-211ENST00000541562 Q8NDZ9 215 aa10.34□□□□□ -0.75
VARS2-211ENST00000541562 A0A087WZ39 114 aa10.34□□□□□ -0.75
VARS2-211ENST00000541562 SCGB1A1P11684 91 aa10.34□□□□□ -0.75
VARS2-211ENST00000541562 CITED1Q99966 193 aa10.34□□□□□ -0.75
VARS2-211ENST00000541562 TRAV13-2A0A0B4J235 113 aa10.33□□□□□ -0.76
VARS2-211ENST00000541562 RPL18AQ02543 176 aaKnown RBP10.33□□□□□ -0.76
VARS2-211ENST00000541562 S100A7L2Q5SY68 101 aa10.32□□□□□ -0.76
VARS2-211ENST00000541562 MRAPQ8TCY5 172 aa10.32□□□□□ -0.76
VARS2-211ENST00000541562 IGHV4-30-4P0DP06 118 aa10.31□□□□□ -0.76
VARS2-211ENST00000541562 C16orf95Q9H693 158 aa10.31□□□□□ -0.76
VARS2-211ENST00000541562 HIST1H4AP62805 103 aaKnown RBP10.3□□□□□ -0.76
VARS2-211ENST00000541562 C6orf99Q4VX62 202 aa10.3□□□□□ -0.76
VARS2-211ENST00000541562 C22orf24Q9Y442 160 aa10.3□□□□□ -0.76
VARS2-211ENST00000541562 CXCL5P42830 114 aa10.29□□□□□ -0.76
VARS2-211ENST00000541562 CMC4P56277 68 aaPredicted RBP10.29□□□□□ -0.76
VARS2-211ENST00000541562 ANK2Q01484 3957 aa10.28□□□□□ -0.76
VARS2-211ENST00000541562 SPAG11BQ08648 103 aa10.28□□□□□ -0.76
VARS2-211ENST00000541562 WFDC10BQ8IUB3 73 aa10.27□□□□□ -0.77
VARS2-211ENST00000541562 KLK5Q9Y337 293 aaPredicted RBP10.27□□□□□ -0.77
VARS2-211ENST00000541562 STAB2Q8WWQ8 2551 aa10.27□□□□□ -0.77
VARS2-211ENST00000541562 COPS9Q8WXC6 57 aa10.27□□□□□ -0.77
VARS2-211ENST00000541562 CYSRT1A8MQ03 144 aa10.26□□□□□ -0.77
VARS2-211ENST00000541562 IBA57-AS1B1ANH7 110 aa10.26□□□□□ -0.77
VARS2-211ENST00000541562 C9orf66Q5T8R8 295 aa10.26□□□□□ -0.77
VARS2-211ENST00000541562 LINC00846Q9NV44 126 aa10.25□□□□□ -0.77
VARS2-211ENST00000541562 RPL28P46779 137 aaKnown RBP10.25□□□□□ -0.77
VARS2-211ENST00000541562 Q6ZTC4 211 aa10.24□□□□□ -0.77
VARS2-211ENST00000541562 KIR2DL5BQ8NHK3 375 aa10.24□□□□□ -0.77
VARS2-211ENST00000541562 LAMTOR3Q9UHA4 124 aa10.24□□□□□ -0.77
VARS2-211ENST00000541562 TRACP01848 142 aa10.23□□□□□ -0.77
VARS2-211ENST00000541562 SPART-AS1P0CW21 52 aa10.23□□□□□ -0.77
VARS2-211ENST00000541562 SMIM20Q8N5G0 67 aa10.23□□□□□ -0.77
VARS2-211ENST00000541562 NANOS2P60321 138 aaKnown RBP10.22□□□□□ -0.77
VARS2-211ENST00000541562 SCXQ7RTU7 201 aa10.22□□□□□ -0.77
VARS2-211ENST00000541562 APOC4P55056 127 aa10.21□□□□□ -0.77
VARS2-211ENST00000541562 CD164L2Q6UWJ8 174 aa10.21□□□□□ -0.77
VARS2-211ENST00000541562 Q8NAQ8 132 aa10.2□□□□□ -0.78
VARS2-211ENST00000541562 KIAA0087Q14695 138 aa10.2□□□□□ -0.78
VARS2-211ENST00000541562 M0R2N4 97 aa10.2□□□□□ -0.78
VARS2-211ENST00000541562 SRRM2Q9UQ35 2752 aaKnown RBP10.2□□□□□ -0.78
VARS2-211ENST00000541562 IGKV2D-24A0A075B6R9 120 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms