RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 K7EQZ3 153 aa0.15□□□□□ -2.39
MDM2-227ENST00000540709 KLK9Q2XQG4 91 aa0.15□□□□□ -2.39
MDM2-227ENST00000540709 DEFB112Q30KQ8 113 aa0.15□□□□□ -2.39
MDM2-227ENST00000540709 DEFB123Q8N688 67 aa0.15□□□□□ -2.39
MDM2-227ENST00000540709 C20orf78Q9BR46 151 aa0.15□□□□□ -2.39
MDM2-227ENST00000540709 HIGD1BQ9P298 99 aa0.15□□□□□ -2.39
MDM2-227ENST00000540709 LAMC1P11047 1609 aa0.15□□□□□ -2.39
MDM2-227ENST00000540709 ABCA12Q86UK0 2595 aa0.15□□□□□ -2.39
MDM2-227ENST00000540709 KNDC1Q76NI1 1749 aa0.15□□□□□ -2.39
MDM2-227ENST00000540709 DIP2CQ9Y2E4 1556 aa0.15□□□□□ -2.39
MDM2-227ENST00000540709 EDC4Q6P2E9 1401 aaKnown RBP0.14□□□□□ -2.39
MDM2-227ENST00000540709 FRAS1Q86XX4 4008 aa0.14□□□□□ -2.39
MDM2-227ENST00000540709 BDP1A6H8Y1 2624 aa0.14□□□□□ -2.39
MDM2-227ENST00000540709 CHD1O14646 1710 aa0.14□□□□□ -2.39
MDM2-227ENST00000540709 MARF1Q9Y4F3 1742 aaKnown RBP0.14□□□□□ -2.39
MDM2-227ENST00000540709 CYB5AP00167 134 aa0.14□□□□□ -2.39
MDM2-227ENST00000540709 IGLC2P0DOY2 106 aa0.14□□□□□ -2.39
MDM2-227ENST00000540709 IGLC3P0DOY3 106 aa0.14□□□□□ -2.39
MDM2-227ENST00000540709 PYY3Q5JQD4 70 aa0.14□□□□□ -2.39
MDM2-227ENST00000540709 HEPN1Q6WQI6 88 aa0.14□□□□□ -2.39
MDM2-227ENST00000540709 S100A16Q96FQ6 103 aaKnown RBP0.14□□□□□ -2.39
MDM2-227ENST00000540709 CCDC141Q6ZP82 1450 aa0.14□□□□□ -2.39
MDM2-227ENST00000540709 MYO7BQ6PIF6 2116 aa0.14□□□□□ -2.39
MDM2-227ENST00000540709 BAZ1AQ9NRL2 1556 aaPredicted RBP0.14□□□□□ -2.39
MDM2-227ENST00000540709 COL4A6Q14031 1691 aa0.14□□□□□ -2.39
MDM2-227ENST00000540709 PPRC1Q5VV67 1664 aaKnown RBP0.14□□□□□ -2.39
MDM2-227ENST00000540709 FAM208BQ5VWN6 2430 aa0.14□□□□□ -2.39
MDM2-227ENST00000540709 ABCC2Q92887 1545 aa0.13□□□□□ -2.39
MDM2-227ENST00000540709 USF3Q68DE3 2245 aa0.13□□□□□ -2.39
MDM2-227ENST00000540709 PLCE1Q9P212 2302 aa0.13□□□□□ -2.39
MDM2-227ENST00000540709 CELSR2Q9HCU4 2923 aa0.13□□□□□ -2.39
MDM2-227ENST00000540709 SPTY2D1-AS1A0A0U1RR47 76 aa0.13□□□□□ -2.39
MDM2-227ENST00000540709 HMGN2P05204 90 aaKnown RBP0.13□□□□□ -2.39
MDM2-227ENST00000540709 PLGLAQ15195 96 aa0.13□□□□□ -2.39
MDM2-227ENST00000540709 NRXN1Q9ULB1 1477 aa0.13□□□□□ -2.39
MDM2-227ENST00000540709 F8P00451 2351 aa0.13□□□□□ -2.39
MDM2-227ENST00000540709 GOLGA4Q13439 2230 aaKnown RBP0.13□□□□□ -2.39
MDM2-227ENST00000540709 NUP188Q5SRE5 1749 aa0.13□□□□□ -2.39
MDM2-227ENST00000540709 XRN1Q8IZH2 1706 aaKnown RBP0.13□□□□□ -2.39
MDM2-227ENST00000540709 IGF2RP11717 2491 aa0.12□□□□□ -2.39
MDM2-227ENST00000540709 PTPRZ1P23471 2315 aaPredicted RBP0.12□□□□□ -2.39
MDM2-227ENST00000540709 A0A1B0GUT8 65 aa0.12□□□□□ -2.39
MDM2-227ENST00000540709 PVALEFA0A1B0GWK0 134 aa0.12□□□□□ -2.39
MDM2-227ENST00000540709 IQCF6A8MYZ5 107 aa0.12□□□□□ -2.39
MDM2-227ENST00000540709 GNG2P59768 71 aa0.12□□□□□ -2.39
MDM2-227ENST00000540709 GAFA1Q96PS6 74 aa0.12□□□□□ -2.39
MDM2-227ENST00000540709 TSC2P49815 1807 aa0.12□□□□□ -2.39
MDM2-227ENST00000540709 NAV2Q8IVL1 2488 aa0.12□□□□□ -2.39
MDM2-227ENST00000540709 A0A0G2JMZ2 1700 aa0.12□□□□□ -2.39
MDM2-227ENST00000540709 SPTBN2O15020 2390 aa0.12□□□□□ -2.39
MDM2-227ENST00000540709 OTOGQ6ZRI0 2925 aa0.12□□□□□ -2.39
MDM2-227ENST00000540709 TULP4Q9NRJ4 1543 aa0.12□□□□□ -2.39
MDM2-227ENST00000540709 AKAP12Q02952 1782 aa0.11□□□□□ -2.39
MDM2-227ENST00000540709 CLTCQ00610 1675 aaKnown RBP0.11□□□□□ -2.39
MDM2-227ENST00000540709 ATP10BO94823 1461 aa0.11□□□□□ -2.39
MDM2-227ENST00000540709 IQSEC2Q5JU85 1478 aa0.11□□□□□ -2.39
MDM2-227ENST00000540709 K7EP34 96 aa0.11□□□□□ -2.39
MDM2-227ENST00000540709 SNRPFP62306 86 aaKnown RBP0.11□□□□□ -2.39
MDM2-227ENST00000540709 NMSQ5H8A3 153 aa0.11□□□□□ -2.39
MDM2-227ENST00000540709 SPRR2GQ9BYE4 73 aa0.11□□□□□ -2.39
MDM2-227ENST00000540709 UBE2D4Q9Y2X8 147 aa0.11□□□□□ -2.39
MDM2-227ENST00000540709 POLQO75417 2590 aa0.11□□□□□ -2.39
MDM2-227ENST00000540709 PKDREJQ9NTG1 2253 aa0.11□□□□□ -2.39
MDM2-227ENST00000540709 PTPRQQ9UMZ3 2332 aa0.1□□□□□ -2.39
MDM2-227ENST00000540709 FMN2Q9NZ56 1722 aa0.1□□□□□ -2.39
MDM2-227ENST00000540709 PLIN4Q96Q06 1357 aa0.1□□□□□ -2.39
MDM2-227ENST00000540709 MYMXA0A1B0GTQ4 84 aa0.1□□□□□ -2.39
MDM2-227ENST00000540709 KANTRA0A1W2PQU2 76 aa0.1□□□□□ -2.39
MDM2-227ENST00000540709 CEBPZOSA8MTT3 80 aa0.1□□□□□ -2.39
MDM2-227ENST00000540709 CCL22O00626 93 aa0.1□□□□□ -2.39
MDM2-227ENST00000540709 RPL38P63173 70 aaKnown RBP0.1□□□□□ -2.39
MDM2-227ENST00000540709 H1FX-AS1Q4G0G2 97 aa0.1□□□□□ -2.39
MDM2-227ENST00000540709 LINC00643Q86TS7 51 aa0.1□□□□□ -2.39
MDM2-227ENST00000540709 WFDC9Q8NEX5 89 aa0.1□□□□□ -2.39
MDM2-227ENST00000540709 MRPL34Q9BQ48 92 aaKnown RBP0.1□□□□□ -2.39
MDM2-227ENST00000540709 CDKN2A-AS1Q9UH64 79 aa0.1□□□□□ -2.39
MDM2-227ENST00000540709 C2CD3Q4AC94 2353 aa0.1□□□□□ -2.39
MDM2-227ENST00000540709 MON2Q7Z3U7 1717 aa0.1□□□□□ -2.39
MDM2-227ENST00000540709 DOPEY2Q9Y3R5 2298 aa0.1□□□□□ -2.39
MDM2-227ENST00000540709 KIAA0556O60303 1618 aa0.09□□□□□ -2.39
MDM2-227ENST00000540709 PAPPA2Q9BXP8 1791 aa0.09□□□□□ -2.39
MDM2-227ENST00000540709 EPRSP07814 1512 aaKnown RBP0.09□□□□□ -2.39
MDM2-227ENST00000540709 DNAJC13O75165 2243 aa0.09□□□□□ -2.39
MDM2-227ENST00000540709 C5P01031 1676 aa0.09□□□□□ -2.39
MDM2-227ENST00000540709 ZFYVE26Q68DK2 2539 aa0.09□□□□□ -2.39
MDM2-227ENST00000540709 ACYP1P07311 99 aa0.09□□□□□ -2.4
MDM2-227ENST00000540709 COX7BP24311 80 aa0.09□□□□□ -2.4
MDM2-227ENST00000540709 S100A13Q99584 98 aa0.09□□□□□ -2.4
MDM2-227ENST00000540709 RABAC1Q9UI14 185 aa0.09□□□□□ -2.4
MDM2-227ENST00000540709 FAT4Q6V0I7 4981 aa0.09□□□□□ -2.4
MDM2-227ENST00000540709 CLIP1P30622 1438 aa0.09□□□□□ -2.4
MDM2-227ENST00000540709 CHD9Q3L8U1 2897 aa0.09□□□□□ -2.4
MDM2-227ENST00000540709 ANKRD26Q9UPS8 1709 aa0.09□□□□□ -2.4
MDM2-227ENST00000540709 FANCAO15360 1455 aa0.09□□□□□ -2.4
MDM2-227ENST00000540709 TARBP1Q13395 1621 aaKnown RBP0.09□□□□□ -2.4
MDM2-227ENST00000540709 ANKRD36A6QL64 1941 aa0.09□□□□□ -2.4
MDM2-227ENST00000540709 MYH4Q9Y623 1939 aa0.09□□□□□ -2.4
MDM2-227ENST00000540709 PIEZO1Q92508 2521 aa0.09□□□□□ -2.4
MDM2-227ENST00000540709 CUX1P39880 1505 aa0.08□□□□□ -2.4
MDM2-227ENST00000540709 NEXMIFQ5QGS0 1516 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms