RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 RPL13AP40429 203 aaKnown RBP10.44□□□□□ -0.74
DDB1-216ENST00000539739 C3orf22Q8N5N4 141 aa10.44□□□□□ -0.74
DDB1-216ENST00000539739 BAALCQ8WXS3 180 aa10.44□□□□□ -0.74
DDB1-216ENST00000539739 LINC00526Q96FQ7 95 aa10.44□□□□□ -0.74
DDB1-216ENST00000539739 UBE2D4Q9Y2X8 147 aa10.44□□□□□ -0.74
DDB1-216ENST00000539739 DNAH1Q9P2D7 4330 aa10.42□□□□□ -0.74
DDB1-216ENST00000539739 A0A096LNJ9 63 aa10.42□□□□□ -0.74
DDB1-216ENST00000539739 IBA57-AS1B1ANH7 110 aa10.42□□□□□ -0.74
DDB1-216ENST00000539739 IGKCP01834 107 aa10.42□□□□□ -0.74
DDB1-216ENST00000539739 CRPP02741 224 aa10.42□□□□□ -0.74
DDB1-216ENST00000539739 Q6ZR54 194 aa10.42□□□□□ -0.74
DDB1-216ENST00000539739 TOMM6Q96B49 74 aa10.42□□□□□ -0.74
DDB1-216ENST00000539739 HIST1H4GQ99525 98 aa10.41□□□□□ -0.74
DDB1-216ENST00000539739 KRTAP1-5Q9BYS1 174 aa10.41□□□□□ -0.74
DDB1-216ENST00000539739 PYGO1Q9Y3Y4 419 aa10.41□□□□□ -0.74
DDB1-216ENST00000539739 KMT2AQ03164 3969 aa10.41□□□□□ -0.74
DDB1-216ENST00000539739 TRAV8-3A0A0A6YYJ7 113 aa10.4□□□□□ -0.74
DDB1-216ENST00000539739 DPM2O94777 84 aa10.4□□□□□ -0.74
DDB1-216ENST00000539739 C9orf153Q5TBE3 101 aa10.4□□□□□ -0.74
DDB1-216ENST00000539739 LINC00269Q8N2A0 174 aa10.4□□□□□ -0.74
DDB1-216ENST00000539739 ANKRD29Q8N6D5 301 aa10.4□□□□□ -0.74
DDB1-216ENST00000539739 UBE2WQ96B02 151 aa10.4□□□□□ -0.74
DDB1-216ENST00000539739 CDC42SE2Q9NRR3 84 aa10.4□□□□□ -0.74
DDB1-216ENST00000539739 SCGB3A1Q96QR1 104 aa10.4□□□□□ -0.75
DDB1-216ENST00000539739 TRAV8-4A0A0B4J246 113 aa10.39□□□□□ -0.75
DDB1-216ENST00000539739 PSMB2P49721 201 aa10.39□□□□□ -0.75
DDB1-216ENST00000539739 UBE2D1P51668 147 aa10.39□□□□□ -0.75
DDB1-216ENST00000539739 MRPS36P82909 103 aaKnown RBP10.39□□□□□ -0.75
DDB1-216ENST00000539739 REG3AQ06141 175 aa10.39□□□□□ -0.75
DDB1-216ENST00000539739 PRR34Q9NV39 138 aa10.39□□□□□ -0.75
DDB1-216ENST00000539739 HERVK_113P63121 156 aa10.38□□□□□ -0.75
DDB1-216ENST00000539739 PAPPA-AS1Q5QFB9 102 aa10.38□□□□□ -0.75
DDB1-216ENST00000539739 CLPSL2Q6UWE3 100 aa10.38□□□□□ -0.75
DDB1-216ENST00000539739 TIMM17AQ99595 171 aa10.38□□□□□ -0.75
DDB1-216ENST00000539739 Q9HAA7 133 aa10.38□□□□□ -0.75
DDB1-216ENST00000539739 IGKV3OR2-268A0A0C4DH90 116 aa10.37□□□□□ -0.75
DDB1-216ENST00000539739 IGIPA6NJ69 53 aa10.37□□□□□ -0.75
DDB1-216ENST00000539739 MIAQ16674 131 aa10.37□□□□□ -0.75
DDB1-216ENST00000539739 C1orf134Q5TEV5 83 aa10.37□□□□□ -0.75
DDB1-216ENST00000539739 ENHOQ6UWT2 76 aa10.37□□□□□ -0.75
DDB1-216ENST00000539739 C6orf223Q8N319 242 aa10.37□□□□□ -0.75
DDB1-216ENST00000539739 RMI2Q96E14 147 aa10.37□□□□□ -0.75
DDB1-216ENST00000539739 TMEM141Q96I45 108 aa10.37□□□□□ -0.75
DDB1-216ENST00000539739 IGLV4-3A0A075B6K6 122 aa10.36□□□□□ -0.75
DDB1-216ENST00000539739 OPRPNQ99935 248 aaPredicted RBP10.36□□□□□ -0.75
DDB1-216ENST00000539739 CRYGAP11844 174 aa10.36□□□□□ -0.75
DDB1-216ENST00000539739 RNASE13Q5GAN3 156 aaKnown RBP10.36□□□□□ -0.75
DDB1-216ENST00000539739 DNAH6Q9C0G6 4158 aa10.36□□□□□ -0.75
DDB1-216ENST00000539739 SACSQ9NZJ4 4579 aa10.36□□□□□ -0.75
DDB1-216ENST00000539739 ACYP1P07311 99 aa10.35□□□□□ -0.75
DDB1-216ENST00000539739 PLNP26678 52 aa10.35□□□□□ -0.75
DDB1-216ENST00000539739 TMEM258P61165 79 aa10.35□□□□□ -0.75
DDB1-216ENST00000539739 C1orf43Q9BWL3 253 aa10.35□□□□□ -0.75
DDB1-216ENST00000539739 PRO0628Q9UI54 55 aa10.35□□□□□ -0.75
DDB1-216ENST00000539739 IGKV2D-26A0A0A0MRZ7 120 aa10.34□□□□□ -0.75
DDB1-216ENST00000539739 SLC25A20O43772 301 aa10.34□□□□□ -0.75
DDB1-216ENST00000539739 KMT2CQ8NEZ4 4911 aaKnown RBP10.34□□□□□ -0.75
DDB1-216ENST00000539739 IGKV2D-24A0A075B6R9 120 aa10.33□□□□□ -0.76
DDB1-216ENST00000539739 MALP21145 153 aa10.33□□□□□ -0.76
DDB1-216ENST00000539739 SS18Q15532 418 aa10.33□□□□□ -0.76
DDB1-216ENST00000539739 FAM104AQ969W3 186 aa10.33□□□□□ -0.76
DDB1-216ENST00000539739 TRAV13-1A0A0B4J241 112 aa10.33□□□□□ -0.76
DDB1-216ENST00000539739 LINC00959A0A1B0GUT2 108 aa10.33□□□□□ -0.76
DDB1-216ENST00000539739 IGLV10-54A0A075B6I4 117 aa10.32□□□□□ -0.76
DDB1-216ENST00000539739 PSCAO43653 123 aa10.32□□□□□ -0.76
DDB1-216ENST00000539739 TMEM170BQ5T4T1 132 aa10.32□□□□□ -0.76
DDB1-216ENST00000539739 ZC2HC1BQ5TFG8 222 aa10.32□□□□□ -0.76
DDB1-216ENST00000539739 AMELXQ99217 191 aa10.32□□□□□ -0.76
DDB1-216ENST00000539739 LOC107984156A0A0G2JMH3 177 aa10.31□□□□□ -0.76
DDB1-216ENST00000539739 GAGE2AQ6NT46 116 aa10.31□□□□□ -0.76
DDB1-216ENST00000539739 ARL17AQ8IVW1 177 aa10.31□□□□□ -0.76
DDB1-216ENST00000539739 LOC107984640A0A0U1RRK4 108 aa10.3□□□□□ -0.76
DDB1-216ENST00000539739 TCL1BO95988 128 aa10.3□□□□□ -0.76
DDB1-216ENST00000539739 COX7CP15954 63 aa10.29□□□□□ -0.76
DDB1-216ENST00000539739 CXCL5P42830 114 aa10.29□□□□□ -0.76
DDB1-216ENST00000539739 CHCHD10Q8WYQ3 142 aaPredicted RBP10.29□□□□□ -0.76
DDB1-216ENST00000539739 HYDINQ4G0P3 5121 aa10.29□□□□□ -0.76
DDB1-216ENST00000539739 PRSS1P07477 247 aa10.29□□□□□ -0.76
DDB1-216ENST00000539739 Q6ZRN7 208 aaPredicted RBP10.29□□□□□ -0.76
DDB1-216ENST00000539739 XCL1P47992 114 aa10.28□□□□□ -0.76
DDB1-216ENST00000539739 TRAV12-1A0A0B4J245 112 aa10.27□□□□□ -0.77
DDB1-216ENST00000539739 H3BT86 120 aa10.26□□□□□ -0.77
DDB1-216ENST00000539739 RTL8CO15255 209 aa10.26□□□□□ -0.77
DDB1-216ENST00000539739 SEC61GP60059 68 aa10.26□□□□□ -0.77
DDB1-216ENST00000539739 CD164L2Q6UWJ8 174 aa10.26□□□□□ -0.77
DDB1-216ENST00000539739 ATXN8Q156A1 80 aa10.25□□□□□ -0.77
DDB1-216ENST00000539739 TRBV10-2A0A0K0K1G8 114 aa10.25□□□□□ -0.77
DDB1-216ENST00000539739 TRACP01848 142 aa10.25□□□□□ -0.77
DDB1-216ENST00000539739 KRTAP26-1Q6PEX3 210 aa10.25□□□□□ -0.77
DDB1-216ENST00000539739 MAPKAPK5-AS1Q8N8E1 139 aa10.25□□□□□ -0.77
DDB1-216ENST00000539739 LINC00242Q5T6M2 205 aa10.24□□□□□ -0.77
DDB1-216ENST00000539739 LINC00336Q6ZUF6 198 aa10.24□□□□□ -0.77
DDB1-216ENST00000539739 RYR2Q92736 4967 aa10.24□□□□□ -0.77
DDB1-216ENST00000539739 ATOX1O00244 68 aa10.23□□□□□ -0.77
DDB1-216ENST00000539739 FAM19A3Q7Z5A8 133 aa10.23□□□□□ -0.77
DDB1-216ENST00000539739 NTN5Q8WTR8 489 aaPredicted RBP10.23□□□□□ -0.77
DDB1-216ENST00000539739 DPH3Q96FX2 82 aa10.23□□□□□ -0.77
DDB1-216ENST00000539739 A0A0J9YXV3 536 aa10.22□□□□□ -0.77
DDB1-216ENST00000539739 TINCRA0A1B0GVN0 87 aa10.22□□□□□ -0.77
DDB1-216ENST00000539739 NDUFC2-KCTD14E9PQ53 114 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms