RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 DNAL4O96015 105 aa8.83□□□□□ -1
SFSWAP-208ENST00000539506 LINC00643Q86TS7 51 aa8.83□□□□□ -1
SFSWAP-208ENST00000539506 IGLV4-60A0A075B6I1 120 aa8.82□□□□□ -1
SFSWAP-208ENST00000539506 F5H768 121 aa8.82□□□□□ -1
SFSWAP-208ENST00000539506 FAM19A3Q7Z5A8 133 aa8.82□□□□□ -1
SFSWAP-208ENST00000539506 LINC01600Q96MT4 127 aa8.82□□□□□ -1
SFSWAP-208ENST00000539506 HIVEP2P31629 2446 aa8.82□□□□□ -1
SFSWAP-208ENST00000539506 C3orf22Q8N5N4 141 aa8.81□□□□□ -1
SFSWAP-208ENST00000539506 SMR3AQ99954 134 aa8.81□□□□□ -1
SFSWAP-208ENST00000539506 KRTAP10-3P60369 221 aa8.81□□□□□ -1
SFSWAP-208ENST00000539506 LINC00846Q9NV44 126 aa8.8□□□□□ -1
SFSWAP-208ENST00000539506 FASNP49327 2511 aaKnown RBP8.79□□□□□ -1
SFSWAP-208ENST00000539506 CCL18P55774 89 aa8.79□□□□□ -1
SFSWAP-208ENST00000539506 HIST1H4AP62805 103 aaKnown RBP8.79□□□□□ -1
SFSWAP-208ENST00000539506 C16orf74Q96GX8 76 aa8.79□□□□□ -1
SFSWAP-208ENST00000539506 OTOGQ6ZRI0 2925 aa8.79□□□□□ -1
SFSWAP-208ENST00000539506 COX7B2Q8TF08 81 aa8.79□□□□□ -1
SFSWAP-208ENST00000539506 KIR2DL5BQ8NHK3 375 aa8.78□□□□□ -1
SFSWAP-208ENST00000539506 A0A1B0GX51 115 aa8.78□□□□□ -1
SFSWAP-208ENST00000539506 TRACP01848 142 aa8.78□□□□□ -1
SFSWAP-208ENST00000539506 OVOL2Q9BRP0 275 aa8.78□□□□□ -1
SFSWAP-208ENST00000539506 TMEM243Q9BU79 118 aa8.78□□□□□ -1
SFSWAP-208ENST00000539506 ACYP1P07311 99 aa8.77□□□□□ -1.01
SFSWAP-208ENST00000539506 XCL1P47992 114 aa8.77□□□□□ -1.01
SFSWAP-208ENST00000539506 HILS1P60008 231 aa8.77□□□□□ -1.01
SFSWAP-208ENST00000539506 FHL2Q14192 279 aa8.77□□□□□ -1.01
SFSWAP-208ENST00000539506 TENM1Q9UKZ4 2725 aa8.77□□□□□ -1.01
SFSWAP-208ENST00000539506 SPATA3Q8NHX4 192 aa8.77□□□□□ -1.01
SFSWAP-208ENST00000539506 TRBV6-4A0A1B0GX49 114 aa8.76□□□□□ -1.01
SFSWAP-208ENST00000539506 DEFB130BP0DP73 79 aa8.76□□□□□ -1.01
SFSWAP-208ENST00000539506 DEFB130AP0DP74 79 aa8.76□□□□□ -1.01
SFSWAP-208ENST00000539506 TRGV4A0A0C4DH28 118 aa8.76□□□□□ -1.01
SFSWAP-208ENST00000539506 TRRAPQ9Y4A5 3859 aa8.76□□□□□ -1.01
SFSWAP-208ENST00000539506 CXCL5P42830 114 aa8.76□□□□□ -1.01
SFSWAP-208ENST00000539506 NOTCH2Q04721 2471 aa8.75□□□□□ -1.01
SFSWAP-208ENST00000539506 SMIM9A6NGZ8 99 aa8.75□□□□□ -1.01
SFSWAP-208ENST00000539506 UQCRQO14949 82 aa8.75□□□□□ -1.01
SFSWAP-208ENST00000539506 TMEM126AQ9H061 195 aa8.75□□□□□ -1.01
SFSWAP-208ENST00000539506 KMT2BQ9UMN6 2715 aaPredicted RBP8.75□□□□□ -1.01
SFSWAP-208ENST00000539506 TRAV13-2A0A0B4J235 113 aa8.75□□□□□ -1.01
SFSWAP-208ENST00000539506 INAFM2P0DMQ5 153 aa8.74□□□□□ -1.01
SFSWAP-208ENST00000539506 CMC4P56277 68 aaPredicted RBP8.74□□□□□ -1.01
SFSWAP-208ENST00000539506 C6orf226Q5I0X4 101 aa8.74□□□□□ -1.01
SFSWAP-208ENST00000539506 RPL28P46779 137 aaKnown RBP8.74□□□□□ -1.01
SFSWAP-208ENST00000539506 DSCR8Q96T75 97 aa8.74□□□□□ -1.01
SFSWAP-208ENST00000539506 IGLV10-54A0A075B6I4 117 aa8.73□□□□□ -1.01
SFSWAP-208ENST00000539506 COX7CP15954 63 aa8.73□□□□□ -1.01
SFSWAP-208ENST00000539506 LINC00526Q96FQ7 95 aa8.73□□□□□ -1.01
SFSWAP-208ENST00000539506 C2orf48Q96LS8 159 aa8.73□□□□□ -1.01
SFSWAP-208ENST00000539506 IMUPQ9GZP8 106 aa8.73□□□□□ -1.01
SFSWAP-208ENST00000539506 HECTD1Q9ULT8 2610 aa8.73□□□□□ -1.01
SFSWAP-208ENST00000539506 TRBV6-8A0A0A6YYG3 113 aa8.72□□□□□ -1.01
SFSWAP-208ENST00000539506 C9orf116Q5BN46 136 aaPredicted RBP8.72□□□□□ -1.01
SFSWAP-208ENST00000539506 FAM19A5Q7Z5A7 132 aaPredicted RBP8.72□□□□□ -1.01
SFSWAP-208ENST00000539506 Q8N3U1 123 aa8.71□□□□□ -1.01
SFSWAP-208ENST00000539506 TRAV23DV6A0A075B6W5 121 aa8.71□□□□□ -1.01
SFSWAP-208ENST00000539506 COPS9Q8WXC6 57 aa8.71□□□□□ -1.01
SFSWAP-208ENST00000539506 SEC61GP60059 68 aa8.71□□□□□ -1.02
SFSWAP-208ENST00000539506 LINC01561Q8N1V8 128 aa8.71□□□□□ -1.02
SFSWAP-208ENST00000539506 IGHV3OR16-9A0A0B4J2B5 98 aa8.7□□□□□ -1.02
SFSWAP-208ENST00000539506 FAM19A1Q7Z5A9 133 aa8.7□□□□□ -1.02
SFSWAP-208ENST00000539506 LINC00482Q8N8I6 264 aa8.7□□□□□ -1.02
SFSWAP-208ENST00000539506 DEFB4AO15263 64 aa8.69□□□□□ -1.02
SFSWAP-208ENST00000539506 X6R8D5 127 aa8.69□□□□□ -1.02
SFSWAP-208ENST00000539506 OXLD1Q5BKU9 147 aa8.69□□□□□ -1.02
SFSWAP-208ENST00000539506 USP17L23D6RBM5 183 aa8.68□□□□□ -1.02
SFSWAP-208ENST00000539506 LINC00612Q8N6U2 182 aa8.68□□□□□ -1.02
SFSWAP-208ENST00000539506 J3QKU1 62 aa8.67□□□□□ -1.02
SFSWAP-208ENST00000539506 RPL18AQ02543 176 aaKnown RBP8.67□□□□□ -1.02
SFSWAP-208ENST00000539506 ENHOQ6UWT2 76 aa8.67□□□□□ -1.02
SFSWAP-208ENST00000539506 FAM222AQ5U5X8 452 aa8.67□□□□□ -1.02
SFSWAP-208ENST00000539506 PF4P02776 101 aa8.66□□□□□ -1.02
SFSWAP-208ENST00000539506 GYPEP15421 78 aa8.66□□□□□ -1.02
SFSWAP-208ENST00000539506 ATOX1O00244 68 aa8.66□□□□□ -1.02
SFSWAP-208ENST00000539506 LY6G6DO95868 133 aa8.65□□□□□ -1.02
SFSWAP-208ENST00000539506 SS18Q15532 418 aa8.65□□□□□ -1.02
SFSWAP-208ENST00000539506 A0A087WZ39 114 aa8.65□□□□□ -1.02
SFSWAP-208ENST00000539506 LINC00959A0A1B0GUT2 108 aa8.65□□□□□ -1.02
SFSWAP-208ENST00000539506 NSD1Q96L73 2696 aaPredicted RBP8.65□□□□□ -1.03
SFSWAP-208ENST00000539506 OXTP01178 125 aa8.65□□□□□ -1.03
SFSWAP-208ENST00000539506 ORMDL1Q9P0S3 153 aa8.65□□□□□ -1.03
SFSWAP-208ENST00000539506 M0R2N4 97 aa8.64□□□□□ -1.03
SFSWAP-208ENST00000539506 LINC00269Q8N2A0 174 aa8.64□□□□□ -1.03
SFSWAP-208ENST00000539506 H0YGX0 51 aa8.63□□□□□ -1.03
SFSWAP-208ENST00000539506 J3KT08 172 aa8.63□□□□□ -1.03
SFSWAP-208ENST00000539506 Q8NDZ9 215 aa8.63□□□□□ -1.03
SFSWAP-208ENST00000539506 C4orf26Q17RF5 130 aa8.62□□□□□ -1.03
SFSWAP-208ENST00000539506 IBA57-AS1B1ANH7 110 aa8.62□□□□□ -1.03
SFSWAP-208ENST00000539506 GHRHP01286 108 aa8.62□□□□□ -1.03
SFSWAP-208ENST00000539506 CRYGAP11844 174 aa8.62□□□□□ -1.03
SFSWAP-208ENST00000539506 MRAPQ8TCY5 172 aa8.61□□□□□ -1.03
SFSWAP-208ENST00000539506 C6orf99Q4VX62 202 aa8.61□□□□□ -1.03
SFSWAP-208ENST00000539506 C20orf197Q8N268 126 aa8.61□□□□□ -1.03
SFSWAP-208ENST00000539506 SERP2Q8N6R1 65 aa8.61□□□□□ -1.03
SFSWAP-208ENST00000539506 C6orf223Q8N319 242 aa8.6□□□□□ -1.03
SFSWAP-208ENST00000539506 NANOS2P60321 138 aaKnown RBP8.6□□□□□ -1.03
SFSWAP-208ENST00000539506 ATRQ13535 2644 aa8.6□□□□□ -1.03
SFSWAP-208ENST00000539506 DEFB135Q30KP9 77 aa8.6□□□□□ -1.03
SFSWAP-208ENST00000539506 DPH3Q96FX2 82 aa8.6□□□□□ -1.03
SFSWAP-208ENST00000539506 HIVEP1P15822 2718 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms