RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 TNFRSF6BO95407 300 aa4.87□□□□□ -1.63
LMO3-220ENST00000539232 PPP1R17O96001 155 aa4.87□□□□□ -1.63
LMO3-220ENST00000539232 S100A4P26447 101 aaKnown RBP4.87□□□□□ -1.63
LMO3-220ENST00000539232 ATXN8Q156A1 80 aa4.87□□□□□ -1.63
LMO3-220ENST00000539232 TMEM170BQ5T4T1 132 aa4.87□□□□□ -1.63
LMO3-220ENST00000539232 ARL17AQ8IVW1 177 aa4.87□□□□□ -1.63
LMO3-220ENST00000539232 MRPL35Q9NZE8 188 aaKnown RBP4.87□□□□□ -1.63
LMO3-220ENST00000539232 MSRB1Q9NZV6 116 aa4.87□□□□□ -1.63
LMO3-220ENST00000539232 PLA2G2DQ9UNK4 145 aa4.87□□□□□ -1.63
LMO3-220ENST00000539232 CSDC2Q9Y534 153 aaKnown RBP4.87□□□□□ -1.63
LMO3-220ENST00000539232 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.86□□□□□ -1.63
LMO3-220ENST00000539232 A0A0B4J2C4 111 aa4.86□□□□□ -1.63
LMO3-220ENST00000539232 TRBV6-4A0A1B0GX49 114 aa4.86□□□□□ -1.63
LMO3-220ENST00000539232 H3BT86 120 aa4.86□□□□□ -1.63
LMO3-220ENST00000539232 UQCRQO14949 82 aa4.86□□□□□ -1.63
LMO3-220ENST00000539232 TCL1BO95988 128 aa4.86□□□□□ -1.63
LMO3-220ENST00000539232 SRSF9Q13242 221 aaKnown RBP eCLIP4.86□□□□□ -1.63
LMO3-220ENST00000539232 RNF185Q96GF1 192 aa4.86□□□□□ -1.63
LMO3-220ENST00000539232 TMEM101Q96IK0 257 aa4.86□□□□□ -1.63
LMO3-220ENST00000539232 PRO1854Q9UHT4 67 aa4.86□□□□□ -1.63
LMO3-220ENST00000539232 TRBV10-2A0A0K0K1G8 114 aa4.85□□□□□ -1.63
LMO3-220ENST00000539232 IGHV3-30P01768 117 aa4.85□□□□□ -1.63
LMO3-220ENST00000539232 IGHV3-33P01772 117 aa4.85□□□□□ -1.63
LMO3-220ENST00000539232 IGHV3-30-3P0DP02 117 aa4.85□□□□□ -1.63
LMO3-220ENST00000539232 IGHV3-30-5P0DP03 117 aa4.85□□□□□ -1.63
LMO3-220ENST00000539232 FAM74A4Q5TZK3 123 aa4.85□□□□□ -1.63
LMO3-220ENST00000539232 TOMM6Q96B49 74 aa4.85□□□□□ -1.63
LMO3-220ENST00000539232 TPPP3Q9BW30 176 aa4.85□□□□□ -1.63
LMO3-220ENST00000539232 KIF25-AS1Q9Y6Z4 181 aa4.85□□□□□ -1.63
LMO3-220ENST00000539232 DNAH5Q8TE73 4624 aa4.85□□□□□ -1.63
LMO3-220ENST00000539232 RNF213Q63HN8 5207 aa4.84□□□□□ -1.63
LMO3-220ENST00000539232 ZNF815PA8K554 130 aa4.84□□□□□ -1.63
LMO3-220ENST00000539232 CXCL5P42830 114 aa4.84□□□□□ -1.63
LMO3-220ENST00000539232 TIRAPP58753 221 aa4.84□□□□□ -1.63
LMO3-220ENST00000539232 RHOHQ15669 191 aa4.84□□□□□ -1.63
LMO3-220ENST00000539232 Q5VSD8 79 aa4.84□□□□□ -1.63
LMO3-220ENST00000539232 SCGB1D4Q6XE38 83 aa4.84□□□□□ -1.63
LMO3-220ENST00000539232 ZFP2Q6ZN57 461 aa4.84□□□□□ -1.63
LMO3-220ENST00000539232 C3orf22Q8N5N4 141 aa4.84□□□□□ -1.63
LMO3-220ENST00000539232 NEXN-AS1Q8NBZ9 246 aa4.84□□□□□ -1.63
LMO3-220ENST00000539232 LINC00526Q96FQ7 95 aa4.84□□□□□ -1.63
LMO3-220ENST00000539232 PRADC1Q9BSG0 188 aa4.84□□□□□ -1.63
LMO3-220ENST00000539232 PHLDA3Q9Y5J5 127 aa4.84□□□□□ -1.63
LMO3-220ENST00000539232 IGHV3-38A0A0C4DH36 116 aa4.83□□□□□ -1.64
LMO3-220ENST00000539232 TRBV30A0A0K0K1B3 111 aa4.83□□□□□ -1.64
LMO3-220ENST00000539232 KRTAP10-1P60331 282 aa4.83□□□□□ -1.64
LMO3-220ENST00000539232 PIK3CD-AS1Q5SR53 167 aa4.83□□□□□ -1.64
LMO3-220ENST00000539232 LELP1Q5T871 98 aa4.83□□□□□ -1.64
LMO3-220ENST00000539232 DAZ4Q86SG3 579 aaKnown RBP4.83□□□□□ -1.64
LMO3-220ENST00000539232 DEFB104AQ8WTQ1 72 aa4.83□□□□□ -1.64
LMO3-220ENST00000539232 UBE2WQ96B02 151 aa4.83□□□□□ -1.64
LMO3-220ENST00000539232 KIR2DL4Q99706 377 aa4.83□□□□□ -1.64
LMO3-220ENST00000539232 TTTY13Q9BZ97 58 aa4.83□□□□□ -1.64
LMO3-220ENST00000539232 Q9HAA7 133 aa4.83□□□□□ -1.64
LMO3-220ENST00000539232 DAZ3Q9NR90 486 aaKnown RBP4.83□□□□□ -1.64
LMO3-220ENST00000539232 A0A087WTM6 91 aa4.82□□□□□ -1.64
LMO3-220ENST00000539232 LRCOL1A6NCL2 159 aa4.82□□□□□ -1.64
LMO3-220ENST00000539232 COX6CP09669 75 aa4.82□□□□□ -1.64
LMO3-220ENST00000539232 CFC1BP0CG36 223 aa4.82□□□□□ -1.64
LMO3-220ENST00000539232 CFC1P0CG37 223 aa4.82□□□□□ -1.64
LMO3-220ENST00000539232 PMVKQ15126 192 aa4.82□□□□□ -1.64
LMO3-220ENST00000539232 LINC01620Q4KN68 170 aa4.82□□□□□ -1.64
LMO3-220ENST00000539232 LINC01556Q5JQF7 62 aa4.82□□□□□ -1.64
LMO3-220ENST00000539232 BAALCQ8WXS3 180 aa4.82□□□□□ -1.64
LMO3-220ENST00000539232 SCGB3A1Q96QR1 104 aa4.82□□□□□ -1.64
LMO3-220ENST00000539232 SMIM2Q9BVW6 85 aa4.82□□□□□ -1.64
LMO3-220ENST00000539232 PPDPFQ9H3Y8 114 aa4.82□□□□□ -1.64
LMO3-220ENST00000539232 C11orf86A6NJI1 115 aa4.81□□□□□ -1.64
LMO3-220ENST00000539232 IBA57-AS1B1ANH7 110 aa4.81□□□□□ -1.64
LMO3-220ENST00000539232 C9JAW5 83 aa4.81□□□□□ -1.64
LMO3-220ENST00000539232 CRYGAP11844 174 aa4.81□□□□□ -1.64
LMO3-220ENST00000539232 HAMPP81172 84 aa4.81□□□□□ -1.64
LMO3-220ENST00000539232 NTM-AS1Q6ZSK4 140 aa4.81□□□□□ -1.64
LMO3-220ENST00000539232 NRACQ8N912 160 aa4.81□□□□□ -1.64
LMO3-220ENST00000539232 NTN5Q8WTR8 489 aaPredicted RBP4.81□□□□□ -1.64
LMO3-220ENST00000539232 TMEM141Q96I45 108 aa4.81□□□□□ -1.64
LMO3-220ENST00000539232 FAT1Q14517 4588 aa4.8□□□□□ -1.64
LMO3-220ENST00000539232 SDHAF1A6NFY7 115 aa4.8□□□□□ -1.64
LMO3-220ENST00000539232 KRTAP29-1A8MX34 341 aaPredicted RBP4.8□□□□□ -1.64
LMO3-220ENST00000539232 SMKR1H3BMG3 65 aa4.8□□□□□ -1.64
LMO3-220ENST00000539232 LECT2O14960 151 aa4.8□□□□□ -1.64
LMO3-220ENST00000539232 GAS8-AS1O95177 125 aa4.8□□□□□ -1.64
LMO3-220ENST00000539232 TMEM258P61165 79 aa4.8□□□□□ -1.64
LMO3-220ENST00000539232 ZNF56Q15929 161 aa4.8□□□□□ -1.64
LMO3-220ENST00000539232 C9orf153Q5TBE3 101 aa4.8□□□□□ -1.64
LMO3-220ENST00000539232 SPANXN1Q5VSR9 72 aa4.8□□□□□ -1.64
LMO3-220ENST00000539232 LINC00643Q86TS7 51 aa4.8□□□□□ -1.64
LMO3-220ENST00000539232 F5H697 171 aa4.79□□□□□ -1.64
LMO3-220ENST00000539232 M0QY20 66 aa4.79□□□□□ -1.64
LMO3-220ENST00000539232 ATOX1O00244 68 aa4.79□□□□□ -1.64
LMO3-220ENST00000539232 COX7CP15954 63 aa4.79□□□□□ -1.64
LMO3-220ENST00000539232 SUMO4Q6EEV6 95 aa4.79□□□□□ -1.64
LMO3-220ENST00000539232 TIMM17AQ99595 171 aa4.79□□□□□ -1.64
LMO3-220ENST00000539232 VPS13BQ7Z7G8 4022 aa4.78□□□□□ -1.64
LMO3-220ENST00000539232 TRAV26-2A0A0B4J265 109 aa4.78□□□□□ -1.64
LMO3-220ENST00000539232 MGPP08493 103 aa4.78□□□□□ -1.64
LMO3-220ENST00000539232 HERVK_113P63121 156 aa4.78□□□□□ -1.64
LMO3-220ENST00000539232 C2orf82Q6UX34 121 aa4.78□□□□□ -1.64
LMO3-220ENST00000539232 SDIM1Q6ZPB5 146 aa4.78□□□□□ -1.64
LMO3-220ENST00000539232 PLEKHB2Q96CS7 222 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms