RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 TOMM7Q9P0U1 55 aa9.2□□□□□ -0.94
RAB40B-202ENST00000538809 APOC3P02656 99 aa9.19□□□□□ -0.94
RAB40B-202ENST00000538809 C1orf137Q5JT78 98 aa9.19□□□□□ -0.94
RAB40B-202ENST00000538809 KRTAP7-1Q8IUC3 87 aa9.19□□□□□ -0.94
RAB40B-202ENST00000538809 Q8IZM0 81 aa9.19□□□□□ -0.94
RAB40B-202ENST00000538809 URB1-AS1Q96HZ7 61 aa9.19□□□□□ -0.94
RAB40B-202ENST00000538809 UBR4Q5T4S7 5183 aa9.18□□□□□ -0.94
RAB40B-202ENST00000538809 IGLV5-45A0A087WSX0 123 aa9.18□□□□□ -0.94
RAB40B-202ENST00000538809 A0A096LNJ9 63 aa9.18□□□□□ -0.94
RAB40B-202ENST00000538809 FA2HQ7L5A8 372 aa9.18□□□□□ -0.94
RAB40B-202ENST00000538809 KRTAP11-1Q8IUC1 163 aa9.18□□□□□ -0.94
RAB40B-202ENST00000538809 PACRGQ96M98 296 aaPredicted RBP9.18□□□□□ -0.94
RAB40B-202ENST00000538809 TINCRA0A1B0GVN0 87 aa9.17□□□□□ -0.94
RAB40B-202ENST00000538809 NDUFC2-KCTD14E9PQ53 114 aa9.17□□□□□ -0.94
RAB40B-202ENST00000538809 SNAPINO95295 136 aa9.17□□□□□ -0.94
RAB40B-202ENST00000538809 PRSS2P07478 247 aa9.17□□□□□ -0.94
RAB40B-202ENST00000538809 SVBPQ8N300 66 aa9.17□□□□□ -0.94
RAB40B-202ENST00000538809 C18orf32Q8TCD1 76 aa9.17□□□□□ -0.94
RAB40B-202ENST00000538809 GEMIN7Q9H840 131 aaKnown RBP9.17□□□□□ -0.94
RAB40B-202ENST00000538809 SMIM1B2RUZ4 78 aa9.16□□□□□ -0.94
RAB40B-202ENST00000538809 M0QXV9 152 aa9.16□□□□□ -0.94
RAB40B-202ENST00000538809 C9orf129Q5T035 196 aaKnown RBP9.16□□□□□ -0.94
RAB40B-202ENST00000538809 YPEL4Q96NS1 127 aa9.16□□□□□ -0.94
RAB40B-202ENST00000538809 CST9LQ9H4G1 147 aa9.16□□□□□ -0.94
RAB40B-202ENST00000538809 TRAPPC1Q9Y5R8 145 aa9.16□□□□□ -0.94
RAB40B-202ENST00000538809 KRTAP10-8P60410 259 aa9.15□□□□□ -0.94
RAB40B-202ENST00000538809 CKS1BP61024 79 aa9.15□□□□□ -0.94
RAB40B-202ENST00000538809 C6orf226Q5I0X4 101 aa9.15□□□□□ -0.94
RAB40B-202ENST00000538809 SMCO4Q9NRQ5 59 aa9.15□□□□□ -0.94
RAB40B-202ENST00000538809 PMVKQ15126 192 aa9.14□□□□□ -0.95
RAB40B-202ENST00000538809 NDUFA5Q16718 116 aa9.14□□□□□ -0.95
RAB40B-202ENST00000538809 LINC00469Q8N7U9 141 aa9.14□□□□□ -0.95
RAB40B-202ENST00000538809 IGLV7-43P04211 117 aa9.13□□□□□ -0.95
RAB40B-202ENST00000538809 UBE2BP63146 152 aa9.13□□□□□ -0.95
RAB40B-202ENST00000538809 PDZD11Q5EBL8 140 aa9.13□□□□□ -0.95
RAB40B-202ENST00000538809 F8VRH5 84 aa9.12□□□□□ -0.95
RAB40B-202ENST00000538809 LINC00614P0C842 121 aa9.12□□□□□ -0.95
RAB40B-202ENST00000538809 CXCL5P42830 114 aa9.12□□□□□ -0.95
RAB40B-202ENST00000538809 HBDP02042 147 aa9.1□□□□□ -0.95
RAB40B-202ENST00000538809 IGLC3P0DOY3 106 aa9.1□□□□□ -0.95
RAB40B-202ENST00000538809 COX7B2Q8TF08 81 aa9.1□□□□□ -0.95
RAB40B-202ENST00000538809 XAGE1AQ9HD64 81 aa9.1□□□□□ -0.95
RAB40B-202ENST00000538809 SPINK8P0C7L1 97 aa9.09□□□□□ -0.95
RAB40B-202ENST00000538809 DIRC1Q969H9 104 aa9.09□□□□□ -0.95
RAB40B-202ENST00000538809 H0Y9J4 135 aa9.08□□□□□ -0.96
RAB40B-202ENST00000538809 PMCHL1Q16048 86 aa9.08□□□□□ -0.96
RAB40B-202ENST00000538809 LRP2P98164 4655 aa9.08□□□□□ -0.96
RAB40B-202ENST00000538809 IGLV5-39A0A0G2JS06 123 aa9.07□□□□□ -0.96
RAB40B-202ENST00000538809 ZNF22P17026 224 aaPredicted RBP9.06□□□□□ -0.96
RAB40B-202ENST00000538809 RAB5BP61020 215 aa9.06□□□□□ -0.96
RAB40B-202ENST00000538809 PRR26Q8N8Z3 221 aa9.06□□□□□ -0.96
RAB40B-202ENST00000538809 H3BRM9 83 aa9.05□□□□□ -0.96
RAB40B-202ENST00000538809 CBLN2Q8IUK8 224 aa9.05□□□□□ -0.96
RAB40B-202ENST00000538809 C22orf24Q9Y442 160 aa9.05□□□□□ -0.96
RAB40B-202ENST00000538809 ATP5LO75964 103 aa9.04□□□□□ -0.96
RAB40B-202ENST00000538809 C11orf86A6NJI1 115 aa9.03□□□□□ -0.96
RAB40B-202ENST00000538809 NDUFA6P56556 154 aa9.03□□□□□ -0.96
RAB40B-202ENST00000538809 CHCHD1Q96BP2 118 aaKnown RBP9.03□□□□□ -0.96
RAB40B-202ENST00000538809 TP73-AS1Q9UF72 201 aa9.03□□□□□ -0.96
RAB40B-202ENST00000538809 KRTAP1-4P0C5Y4 121 aa9.02□□□□□ -0.97
RAB40B-202ENST00000538809 MRPL55Q7Z7F7 128 aaKnown RBP9.01□□□□□ -0.97
RAB40B-202ENST00000538809 BAGE3Q86Y29 109 aa9.01□□□□□ -0.97
RAB40B-202ENST00000538809 LBHQ53QV2 105 aaPredicted RBP9□□□□□ -0.97
RAB40B-202ENST00000538809 SLC7A5P1Q8MH63 180 aa9□□□□□ -0.97
RAB40B-202ENST00000538809 IGLV5-37A0A075B6J1 123 aa8.99□□□□□ -0.97
RAB40B-202ENST00000538809 TRAV12-1A0A0B4J245 112 aa8.99□□□□□ -0.97
RAB40B-202ENST00000538809 NUPR1O60356 82 aa8.99□□□□□ -0.97
RAB40B-202ENST00000538809 GAGE10A6NGK3 116 aa8.98□□□□□ -0.97
RAB40B-202ENST00000538809 RPL37AP8A6NKH3 93 aa8.98□□□□□ -0.97
RAB40B-202ENST00000538809 IFI27L1Q96BM0 104 aa8.98□□□□□ -0.97
RAB40B-202ENST00000538809 CHTOPQ9Y3Y2 248 aaKnown RBP8.98□□□□□ -0.97
RAB40B-202ENST00000538809 IGLV1-50A0A075B6I6 118 aa8.97□□□□□ -0.97
RAB40B-202ENST00000538809 ZNF861PO60384 105 aa8.97□□□□□ -0.97
RAB40B-202ENST00000538809 TRGC2P03986 189 aa8.97□□□□□ -0.97
RAB40B-202ENST00000538809 LINC00310P59036 64 aa8.97□□□□□ -0.97
RAB40B-202ENST00000538809 LINC00167Q96N53 147 aa8.97□□□□□ -0.97
RAB40B-202ENST00000538809 PFN2P35080 140 aa8.96□□□□□ -0.98
RAB40B-202ENST00000538809 TMEM170BQ5T4T1 132 aa8.96□□□□□ -0.98
RAB40B-202ENST00000538809 ZNF625Q96I27 306 aaPredicted RBP8.96□□□□□ -0.98
RAB40B-202ENST00000538809 TMEM223A0PJW6 202 aa8.95□□□□□ -0.98
RAB40B-202ENST00000538809 SCO1O75880 301 aa8.95□□□□□ -0.98
RAB40B-202ENST00000538809 FAM19A2Q8N3H0 131 aa8.95□□□□□ -0.98
RAB40B-202ENST00000538809 NKAPP1Q8N9T2 125 aa8.95□□□□□ -0.98
RAB40B-202ENST00000538809 ERG28Q9UKR5 140 aa8.95□□□□□ -0.98
RAB40B-202ENST00000538809 BCE1O60756 84 aa8.94□□□□□ -0.98
RAB40B-202ENST00000538809 HSBP1O75506 76 aa8.94□□□□□ -0.98
RAB40B-202ENST00000538809 COX17Q14061 63 aa8.94□□□□□ -0.98
RAB40B-202ENST00000538809 COLCA2A8K830 154 aa8.93□□□□□ -0.98
RAB40B-202ENST00000538809 SFTA2Q6UW10 78 aa8.93□□□□□ -0.98
RAB40B-202ENST00000538809 SND1-IT1Q9HBX3 110 aa8.93□□□□□ -0.98
RAB40B-202ENST00000538809 LPAP08519 4548 aa8.92□□□□□ -0.98
RAB40B-202ENST00000538809 SERF1AO75920 110 aa8.92□□□□□ -0.98
RAB40B-202ENST00000538809 VPREB1P12018 145 aa8.92□□□□□ -0.98
RAB40B-202ENST00000538809 RPL28P46779 137 aaKnown RBP8.92□□□□□ -0.98
RAB40B-202ENST00000538809 IGKV2-28A0A075B6P5 120 aa8.91□□□□□ -0.98
RAB40B-202ENST00000538809 IGKV2D-28P01615 120 aa8.91□□□□□ -0.98
RAB40B-202ENST00000538809 RPL13AP40429 203 aaKnown RBP8.91□□□□□ -0.98
RAB40B-202ENST00000538809 Q8NDZ9 215 aa8.91□□□□□ -0.98
RAB40B-202ENST00000538809 RNF213Q63HN8 5207 aa8.91□□□□□ -0.98
RAB40B-202ENST00000538809 KRTAP13-1Q8IUC0 172 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms