RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 KRTAP19-1Q8IUB9 90 aa2.5□□□□□ -2.01
PTPN22-211ENST00000538253 C6orf223Q8N319 242 aa2.5□□□□□ -2.01
PTPN22-211ENST00000538253 PRSS3P2Q8NHM4 247 aa2.5□□□□□ -2.01
PTPN22-211ENST00000538253 TMEM141Q96I45 108 aa2.5□□□□□ -2.01
PTPN22-211ENST00000538253 CELA1Q9UNI1 258 aa2.5□□□□□ -2.01
PTPN22-211ENST00000538253 MAP1AP78559 2803 aaPredicted RBP2.5□□□□□ -2.01
PTPN22-211ENST00000538253 TRBV6-8A0A0A6YYG3 113 aa2.5□□□□□ -2.01
PTPN22-211ENST00000538253 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.5□□□□□ -2.01
PTPN22-211ENST00000538253 A0A0J9YY99 117 aa2.5□□□□□ -2.01
PTPN22-211ENST00000538253 A0A1B0GUV1 79 aa2.5□□□□□ -2.01
PTPN22-211ENST00000538253 SLC25A29Q8N8R3 303 aa2.5□□□□□ -2.01
PTPN22-211ENST00000538253 MSRB1Q9NZV6 116 aa2.5□□□□□ -2.01
PTPN22-211ENST00000538253 A0A096LPF7 62 aa2.49□□□□□ -2.01
PTPN22-211ENST00000538253 NBDYA0A0U1RRE5 68 aa2.49□□□□□ -2.01
PTPN22-211ENST00000538253 SDHAF1A6NFY7 115 aa2.49□□□□□ -2.01
PTPN22-211ENST00000538253 SUMO4Q6EEV6 95 aa2.49□□□□□ -2.01
PTPN22-211ENST00000538253 LYPD5Q6UWN5 251 aa2.49□□□□□ -2.01
PTPN22-211ENST00000538253 A0A1B0GXF2 115 aa2.49□□□□□ -2.01
PTPN22-211ENST00000538253 J3QL48 77 aa2.49□□□□□ -2.01
PTPN22-211ENST00000538253 M0QY20 66 aa2.49□□□□□ -2.01
PTPN22-211ENST00000538253 ATOX1O00244 68 aa2.49□□□□□ -2.01
PTPN22-211ENST00000538253 RPL18AQ02543 176 aaKnown RBP2.49□□□□□ -2.01
PTPN22-211ENST00000538253 Q8N8P6 123 aa2.49□□□□□ -2.01
PTPN22-211ENST00000538253 SMIM2Q9BVW6 85 aa2.49□□□□□ -2.01
PTPN22-211ENST00000538253 C11orf21Q9P2W6 132 aa2.49□□□□□ -2.01
PTPN22-211ENST00000538253 LINC00474Q9P2X8 69 aa2.49□□□□□ -2.01
PTPN22-211ENST00000538253 MXRA5Q9NR99 2828 aa2.49□□□□□ -2.01
PTPN22-211ENST00000538253 LOC107984156A0A0G2JMH3 177 aa2.49□□□□□ -2.01
PTPN22-211ENST00000538253 NDUFC2-KCTD14E9PQ53 114 aa2.49□□□□□ -2.01
PTPN22-211ENST00000538253 ARL17AQ8IVW1 177 aa2.49□□□□□ -2.01
PTPN22-211ENST00000538253 CHCHD1Q96BP2 118 aaKnown RBP2.49□□□□□ -2.01
PTPN22-211ENST00000538253 TRBV27A0A0K0K1C4 114 aa2.48□□□□□ -2.01
PTPN22-211ENST00000538253 IBA57-AS1B1ANH7 110 aa2.48□□□□□ -2.01
PTPN22-211ENST00000538253 SLC25A20O43772 301 aa2.48□□□□□ -2.01
PTPN22-211ENST00000538253 DCHS2Q6V1P9 2916 aa2.48□□□□□ -2.01
PTPN22-211ENST00000538253 TRBV7-6A0A0J9YX20 115 aa2.48□□□□□ -2.01
PTPN22-211ENST00000538253 TEX49A0A1B0GTD5 131 aa2.48□□□□□ -2.01
PTPN22-211ENST00000538253 MYMXA0A1B0GTQ4 84 aa2.48□□□□□ -2.01
PTPN22-211ENST00000538253 MRPS36P82909 103 aaKnown RBP2.48□□□□□ -2.01
PTPN22-211ENST00000538253 VSIG2Q96IQ7 327 aa2.48□□□□□ -2.01
PTPN22-211ENST00000538253 TIMM17BO60830 172 aa2.48□□□□□ -2.01
PTPN22-211ENST00000538253 CXCL5P42830 114 aa2.48□□□□□ -2.01
PTPN22-211ENST00000538253 HIST1H4AP62805 103 aaKnown RBP2.48□□□□□ -2.01
PTPN22-211ENST00000538253 LINC00528Q8N1L1 170 aa2.48□□□□□ -2.01
PTPN22-211ENST00000538253 SERP2Q8N6R1 65 aa2.48□□□□□ -2.01
PTPN22-211ENST00000538253 KIF25-AS1Q9Y6Z4 181 aa2.48□□□□□ -2.01
PTPN22-211ENST00000538253 CELSR3Q9NYQ7 3312 aa2.47□□□□□ -2.01
PTPN22-211ENST00000538253 ZANQ9Y493 2812 aa2.47□□□□□ -2.01
PTPN22-211ENST00000538253 AGRNO00468 2067 aa2.47□□□□□ -2.01
PTPN22-211ENST00000538253 TACC2O95359 2948 aa2.47□□□□□ -2.01
PTPN22-211ENST00000538253 NPYP01303 97 aa2.47□□□□□ -2.01
PTPN22-211ENST00000538253 MRPL51Q4U2R6 128 aaKnown RBP2.47□□□□□ -2.01
PTPN22-211ENST00000538253 CRYBG3Q68DQ2 2970 aa2.47□□□□□ -2.01
PTPN22-211ENST00000538253 KTN1-AS1Q86SY8 53 aa2.47□□□□□ -2.01
PTPN22-211ENST00000538253 COPS9Q8WXC6 57 aa2.47□□□□□ -2.01
PTPN22-211ENST00000538253 TIMM17AQ99595 171 aa2.47□□□□□ -2.01
PTPN22-211ENST00000538253 TTTY13Q9BZ97 58 aa2.47□□□□□ -2.01
PTPN22-211ENST00000538253 LAMTOR3Q9UHA4 124 aa2.47□□□□□ -2.01
PTPN22-211ENST00000538253 IGHV3-73A0A0B4J1V6 119 aa2.47□□□□□ -2.01
PTPN22-211ENST00000538253 IGHV1-58A0A0C4DH39 117 aa2.47□□□□□ -2.01
PTPN22-211ENST00000538253 ANGP03950 147 aaKnown RBP2.47□□□□□ -2.01
PTPN22-211ENST00000538253 ZNF22P17026 224 aaPredicted RBP2.47□□□□□ -2.01
PTPN22-211ENST00000538253 RBM3P98179 157 aaKnown RBP2.47□□□□□ -2.01
PTPN22-211ENST00000538253 TNP2Q05952 138 aa2.47□□□□□ -2.01
PTPN22-211ENST00000538253 C5orf38Q86SI9 138 aa2.47□□□□□ -2.01
PTPN22-211ENST00000538253 M0R378 163 aa2.46□□□□□ -2.01
PTPN22-211ENST00000538253 POLR2KP53803 58 aaKnown RBP2.46□□□□□ -2.01
PTPN22-211ENST00000538253 ESRGQ1W209 222 aa2.46□□□□□ -2.01
PTPN22-211ENST00000538253 FAM19A3Q7Z5A8 133 aa2.46□□□□□ -2.01
PTPN22-211ENST00000538253 LINC00588Q9Y4M8 146 aa2.46□□□□□ -2.01
PTPN22-211ENST00000538253 LAMA5O15230 3695 aa2.46□□□□□ -2.02
PTPN22-211ENST00000538253 IGKV2D-26A0A0A0MRZ7 120 aa2.46□□□□□ -2.02
PTPN22-211ENST00000538253 D6R8Y8 96 aa2.46□□□□□ -2.02
PTPN22-211ENST00000538253 PRSS2P07478 247 aa2.46□□□□□ -2.02
PTPN22-211ENST00000538253 DNHD1Q96M86 4753 aa2.46□□□□□ -2.02
PTPN22-211ENST00000538253 NF1P21359 2839 aa2.46□□□□□ -2.02
PTPN22-211ENST00000538253 WDFY3Q8IZQ1 3526 aa2.46□□□□□ -2.02
PTPN22-211ENST00000538253 HBDP02042 147 aa2.46□□□□□ -2.02
PTPN22-211ENST00000538253 S100A7L2Q5SY68 101 aa2.46□□□□□ -2.02
PTPN22-211ENST00000538253 C20orf203Q8NBC4 194 aa2.46□□□□□ -2.02
PTPN22-211ENST00000538253 UBE2WQ96B02 151 aa2.46□□□□□ -2.02
PTPN22-211ENST00000538253 IGKV2D-24A0A075B6R9 120 aa2.45□□□□□ -2.02
PTPN22-211ENST00000538253 RNF185Q96GF1 192 aa2.45□□□□□ -2.02
PTPN22-211ENST00000538253 LINC01600Q96MT4 127 aa2.45□□□□□ -2.02
PTPN22-211ENST00000538253 SCGB3A1Q96QR1 104 aa2.45□□□□□ -2.02
PTPN22-211ENST00000538253 HIST1H4GQ99525 98 aa2.45□□□□□ -2.02
PTPN22-211ENST00000538253 LINC00315P59091 139 aa2.45□□□□□ -2.02
PTPN22-211ENST00000538253 REG3AQ06141 175 aa2.45□□□□□ -2.02
PTPN22-211ENST00000538253 NIPBLQ6KC79 2804 aaeCLIP2.45□□□□□ -2.02
PTPN22-211ENST00000538253 COX7A2LO14548 114 aa2.45□□□□□ -2.02
PTPN22-211ENST00000538253 CCKP06307 115 aa2.45□□□□□ -2.02
PTPN22-211ENST00000538253 LINC00643Q86TS7 51 aa2.45□□□□□ -2.02
PTPN22-211ENST00000538253 FBN1P35555 2871 aaKnown RBP2.45□□□□□ -2.02
PTPN22-211ENST00000538253 SMG1Q96Q15 3661 aaKnown RBP2.44□□□□□ -2.02
PTPN22-211ENST00000538253 AKAP9Q99996 3911 aa2.44□□□□□ -2.02
PTPN22-211ENST00000538253 ASPMQ8IZT6 3477 aa2.44□□□□□ -2.02
PTPN22-211ENST00000538253 ZNF73O43830 326 aaPredicted RBP2.44□□□□□ -2.02
PTPN22-211ENST00000538253 LGALS3P17931 250 aaKnown RBP2.44□□□□□ -2.02
PTPN22-211ENST00000538253 TMEM170BQ5T4T1 132 aa2.44□□□□□ -2.02
PTPN22-211ENST00000538253 Q6ZR54 194 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms