RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-208ENST00000537983 A0A0J9YXY3 114 aa3.75□□□□□ -1.81
NPIPB3-208ENST00000537983 LINC00959A0A1B0GUT2 108 aa3.75□□□□□ -1.81
NPIPB3-208ENST00000537983 A0A1B0GWB2 263 aa3.75□□□□□ -1.81
NPIPB3-208ENST00000537983 TMEM262E9PQX1 116 aa3.75□□□□□ -1.81
NPIPB3-208ENST00000537983 VPREB1P12018 145 aa3.75□□□□□ -1.81
NPIPB3-208ENST00000537983 HERV-K104P63124 156 aa3.75□□□□□ -1.81
NPIPB3-208ENST00000537983 SRSF9Q13242 221 aaKnown RBP eCLIP3.75□□□□□ -1.81
NPIPB3-208ENST00000537983 SS18Q15532 418 aa3.75□□□□□ -1.81
NPIPB3-208ENST00000537983 SFTA2Q6UW10 78 aa3.75□□□□□ -1.81
NPIPB3-208ENST00000537983 Q6ZVH6 145 aa3.75□□□□□ -1.81
NPIPB3-208ENST00000537983 C10orf126Q8N4M7 172 aa3.75□□□□□ -1.81
NPIPB3-208ENST00000537983 C15orf53Q8NAA6 179 aa3.75□□□□□ -1.81
NPIPB3-208ENST00000537983 SPANXDQ9BXN6 97 aa3.75□□□□□ -1.81
NPIPB3-208ENST00000537983 SPANXCQ9NY87 97 aa3.75□□□□□ -1.81
NPIPB3-208ENST00000537983 DEFB131BA0A096LNP1 70 aa3.74□□□□□ -1.81
NPIPB3-208ENST00000537983 IGHV3OR16-9A0A0B4J2B5 98 aa3.74□□□□□ -1.81
NPIPB3-208ENST00000537983 IGKV3OR2-268A0A0C4DH90 116 aa3.74□□□□□ -1.81
NPIPB3-208ENST00000537983 KRTAP29-1A8MX34 341 aaPredicted RBP3.74□□□□□ -1.81
NPIPB3-208ENST00000537983 IGHV3-30P01768 117 aa3.74□□□□□ -1.81
NPIPB3-208ENST00000537983 PRB2P02812 416 aaPredicted RBP3.74□□□□□ -1.81
NPIPB3-208ENST00000537983 ANGP03950 147 aaKnown RBP3.74□□□□□ -1.81
NPIPB3-208ENST00000537983 SMIM13P0DJ93 91 aa3.74□□□□□ -1.81
NPIPB3-208ENST00000537983 IGHV3-30-5P0DP03 117 aa3.74□□□□□ -1.81
NPIPB3-208ENST00000537983 SMIM29Q86T20 159 aa3.74□□□□□ -1.81
NPIPB3-208ENST00000537983 NHP2Q9NX24 153 aaKnown RBP3.74□□□□□ -1.81
NPIPB3-208ENST00000537983 MAST4O15021 2626 aa3.74□□□□□ -1.81
NPIPB3-208ENST00000537983 STAB1Q9NY15 2570 aa3.73□□□□□ -1.81
NPIPB3-208ENST00000537983 K7EP13 123 aa3.73□□□□□ -1.81
NPIPB3-208ENST00000537983 IFITM1P13164 125 aa3.73□□□□□ -1.81
NPIPB3-208ENST00000537983 REG3AQ06141 175 aa3.73□□□□□ -1.81
NPIPB3-208ENST00000537983 CIRBPQ14011 172 aaKnown RBP3.73□□□□□ -1.81
NPIPB3-208ENST00000537983 MIAQ16674 131 aa3.73□□□□□ -1.81
NPIPB3-208ENST00000537983 DEFB121Q5J5C9 76 aa3.73□□□□□ -1.81
NPIPB3-208ENST00000537983 CD164L2Q6UWJ8 174 aa3.73□□□□□ -1.81
NPIPB3-208ENST00000537983 LYPD5Q6UWN5 251 aa3.73□□□□□ -1.81
NPIPB3-208ENST00000537983 LINC00269Q8N2A0 174 aa3.73□□□□□ -1.81
NPIPB3-208ENST00000537983 COX7B2Q8TF08 81 aa3.73□□□□□ -1.81
NPIPB3-208ENST00000537983 COPS9Q8WXC6 57 aa3.73□□□□□ -1.81
NPIPB3-208ENST00000537983 ZNF625Q96I27 306 aaPredicted RBP3.73□□□□□ -1.81
NPIPB3-208ENST00000537983 LITAFQ99732 161 aa3.73□□□□□ -1.81
NPIPB3-208ENST00000537983 PPDPFQ9H3Y8 114 aa3.73□□□□□ -1.81
NPIPB3-208ENST00000537983 Q9H8V8 135 aa3.73□□□□□ -1.81
NPIPB3-208ENST00000537983 PRR34Q9NV39 138 aa3.73□□□□□ -1.81
NPIPB3-208ENST00000537983 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.72□□□□□ -1.81
NPIPB3-208ENST00000537983 A0A0B4J2C4 111 aa3.72□□□□□ -1.81
NPIPB3-208ENST00000537983 K7ERJ3 54 aa3.72□□□□□ -1.81
NPIPB3-208ENST00000537983 CRPP02741 224 aa3.72□□□□□ -1.81
NPIPB3-208ENST00000537983 CXCL5P42830 114 aa3.72□□□□□ -1.81
NPIPB3-208ENST00000537983 XCL1P47992 114 aa3.72□□□□□ -1.81
NPIPB3-208ENST00000537983 CLPSL2Q6UWE3 100 aa3.72□□□□□ -1.81
NPIPB3-208ENST00000537983 Q8IZM0 81 aa3.72□□□□□ -1.81
NPIPB3-208ENST00000537983 MRAPQ8TCY5 172 aa3.72□□□□□ -1.81
NPIPB3-208ENST00000537983 CHCHD10Q8WYQ3 142 aaPredicted RBP3.72□□□□□ -1.81
NPIPB3-208ENST00000537983 B9D2Q9BPU9 175 aa3.72□□□□□ -1.81
NPIPB3-208ENST00000537983 KRTAP9-8Q9BYQ0 159 aa3.72□□□□□ -1.81
NPIPB3-208ENST00000537983 TRAV8-4A0A0B4J246 113 aa3.71□□□□□ -1.82
NPIPB3-208ENST00000537983 A0A1W2PPM0 123 aa3.71□□□□□ -1.82
NPIPB3-208ENST00000537983 H3BUT2 72 aa3.71□□□□□ -1.82
NPIPB3-208ENST00000537983 COX7A2LO14548 114 aa3.71□□□□□ -1.82
NPIPB3-208ENST00000537983 VAMP3Q15836 100 aa3.71□□□□□ -1.82
NPIPB3-208ENST00000537983 LINC01556Q5JQF7 62 aa3.71□□□□□ -1.82
NPIPB3-208ENST00000537983 MEIG1Q5JSS6 88 aa3.71□□□□□ -1.82
NPIPB3-208ENST00000537983 LYRM7Q5U5X0 104 aa3.71□□□□□ -1.82
NPIPB3-208ENST00000537983 C5orf38Q86SI9 138 aa3.71□□□□□ -1.82
NPIPB3-208ENST00000537983 WFDC10BQ8IUB3 73 aa3.71□□□□□ -1.82
NPIPB3-208ENST00000537983 RAB37Q96AX2 223 aa3.71□□□□□ -1.82
NPIPB3-208ENST00000537983 COL6A5A8TX70 2615 aa3.7□□□□□ -1.82
NPIPB3-208ENST00000537983 A4D1N5 150 aa3.7□□□□□ -1.82
NPIPB3-208ENST00000537983 IBA57-AS1B1ANH7 110 aa3.7□□□□□ -1.82
NPIPB3-208ENST00000537983 IGLL5B9A064 214 aa3.7□□□□□ -1.82
NPIPB3-208ENST00000537983 K7EP34 96 aa3.7□□□□□ -1.82
NPIPB3-208ENST00000537983 APOMO95445 188 aa3.7□□□□□ -1.82
NPIPB3-208ENST00000537983 FABP2P12104 132 aa3.7□□□□□ -1.82
NPIPB3-208ENST00000537983 ESRGQ1W209 222 aa3.7□□□□□ -1.82
NPIPB3-208ENST00000537983 KRTAP21-3Q3LHN1 58 aa3.7□□□□□ -1.82
NPIPB3-208ENST00000537983 GTF2H5Q6ZYL4 71 aa3.7□□□□□ -1.82
NPIPB3-208ENST00000537983 MUSTN1Q8IVN3 82 aa3.7□□□□□ -1.82
NPIPB3-208ENST00000537983 KRTAP1-5Q9BYS1 174 aa3.7□□□□□ -1.82
NPIPB3-208ENST00000537983 TOMM7Q9P0U1 55 aa3.7□□□□□ -1.82
NPIPB3-208ENST00000537983 KLK12Q9UKR0 248 aa3.7□□□□□ -1.82
NPIPB3-208ENST00000537983 TSPAN13O95857 204 aa3.69□□□□□ -1.82
NPIPB3-208ENST00000537983 IGHV3-33P01772 117 aa3.69□□□□□ -1.82
NPIPB3-208ENST00000537983 CFC1BP0CG36 223 aa3.69□□□□□ -1.82
NPIPB3-208ENST00000537983 CFC1P0CG37 223 aa3.69□□□□□ -1.82
NPIPB3-208ENST00000537983 DNAH10OSP0CZ25 163 aa3.69□□□□□ -1.82
NPIPB3-208ENST00000537983 C6orf226Q5I0X4 101 aa3.69□□□□□ -1.82
NPIPB3-208ENST00000537983 ADAMTSL4-AS1Q5T5F5 129 aa3.69□□□□□ -1.82
NPIPB3-208ENST00000537983 KRTAP5-3Q6L8H2 238 aa3.69□□□□□ -1.82
NPIPB3-208ENST00000537983 ENHOQ6UWT2 76 aa3.69□□□□□ -1.82
NPIPB3-208ENST00000537983 MUC7Q8TAX7 377 aa3.69□□□□□ -1.82
NPIPB3-208ENST00000537983 LINC00308Q8TCZ7 52 aa3.69□□□□□ -1.82
NPIPB3-208ENST00000537983 UPK3BQ9BT76 320 aa3.69□□□□□ -1.82
NPIPB3-208ENST00000537983 KRTAP17-1Q9BYP8 105 aa3.69□□□□□ -1.82
NPIPB3-208ENST00000537983 SPCS1Q9Y6A9 102 aa3.69□□□□□ -1.82
NPIPB3-208ENST00000537983 HUWE1Q7Z6Z7 4374 aaKnown RBP3.69□□□□□ -1.82
NPIPB3-208ENST00000537983 IGLV10-54A0A075B6I4 117 aa3.68□□□□□ -1.82
NPIPB3-208ENST00000537983 CCL18P55774 89 aa3.68□□□□□ -1.82
NPIPB3-208ENST00000537983 SPAG11BQ08648 103 aa3.68□□□□□ -1.82
NPIPB3-208ENST00000537983 KIAA0087Q14695 138 aa3.68□□□□□ -1.82
NPIPB3-208ENST00000537983 UBE2WQ96B02 151 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms