RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 PRR26Q8N8Z3 221 aa8.72□□□□□ -1.01
SHARPIN-208ENST00000533948 NPSP0C0P6 89 aa8.71□□□□□ -1.02
SHARPIN-208ENST00000533948 C2orf82Q6UX34 121 aa8.71□□□□□ -1.02
SHARPIN-208ENST00000533948 PHF5AQ7RTV0 110 aaKnown RBP8.71□□□□□ -1.02
SHARPIN-208ENST00000533948 LINC01561Q8N1V8 128 aa8.71□□□□□ -1.02
SHARPIN-208ENST00000533948 ATP6V1G1O75348 118 aa8.7□□□□□ -1.02
SHARPIN-208ENST00000533948 FAM168BA1KXE4 195 aa8.69□□□□□ -1.02
SHARPIN-208ENST00000533948 SCO1O75880 301 aa8.69□□□□□ -1.02
SHARPIN-208ENST00000533948 IGLV7-43P04211 117 aa8.69□□□□□ -1.02
SHARPIN-208ENST00000533948 PRSS2P07478 247 aa8.69□□□□□ -1.02
SHARPIN-208ENST00000533948 GAGE2EQ4V326 116 aa8.69□□□□□ -1.02
SHARPIN-208ENST00000533948 PAPPA-AS1Q5QFB9 102 aa8.69□□□□□ -1.02
SHARPIN-208ENST00000533948 FAM19A3Q7Z5A8 133 aa8.69□□□□□ -1.02
SHARPIN-208ENST00000533948 TOMM6Q96B49 74 aa8.69□□□□□ -1.02
SHARPIN-208ENST00000533948 TOMM7Q9P0U1 55 aa8.69□□□□□ -1.02
SHARPIN-208ENST00000533948 GAGE2DQ9UEU5 116 aa8.69□□□□□ -1.02
SHARPIN-208ENST00000533948 TRBV30A0A0K0K1B3 111 aa8.68□□□□□ -1.02
SHARPIN-208ENST00000533948 COLCA2A8K830 154 aa8.68□□□□□ -1.02
SHARPIN-208ENST00000533948 FA2HQ7L5A8 372 aa8.68□□□□□ -1.02
SHARPIN-208ENST00000533948 SCGB3A1Q96QR1 104 aa8.68□□□□□ -1.02
SHARPIN-208ENST00000533948 TIMM17AQ99595 171 aa8.68□□□□□ -1.02
SHARPIN-208ENST00000533948 IGLV1-50A0A075B6I6 118 aa8.67□□□□□ -1.02
SHARPIN-208ENST00000533948 A0A0U1RQV1 116 aa8.67□□□□□ -1.02
SHARPIN-208ENST00000533948 PRR4Q16378 134 aa8.67□□□□□ -1.02
SHARPIN-208ENST00000533948 PACRGQ96M98 296 aaPredicted RBP8.67□□□□□ -1.02
SHARPIN-208ENST00000533948 GEMIN7Q9H840 131 aaKnown RBP8.67□□□□□ -1.02
SHARPIN-208ENST00000533948 H0Y9J4 135 aa8.66□□□□□ -1.02
SHARPIN-208ENST00000533948 CKS1BP61024 79 aa8.66□□□□□ -1.02
SHARPIN-208ENST00000533948 SEC11AP67812 179 aa8.66□□□□□ -1.02
SHARPIN-208ENST00000533948 C6orf226Q5I0X4 101 aa8.66□□□□□ -1.02
SHARPIN-208ENST00000533948 ERASQ7Z444 233 aa8.66□□□□□ -1.02
SHARPIN-208ENST00000533948 FAM19A5Q7Z5A7 132 aaPredicted RBP8.66□□□□□ -1.02
SHARPIN-208ENST00000533948 KRTAP7-1Q8IUC3 87 aa8.66□□□□□ -1.02
SHARPIN-208ENST00000533948 C18orf32Q8TCD1 76 aa8.66□□□□□ -1.02
SHARPIN-208ENST00000533948 CDKN2A-AS1Q9UH64 79 aa8.66□□□□□ -1.02
SHARPIN-208ENST00000533948 LINC01546A6NGU7 62 aa8.65□□□□□ -1.02
SHARPIN-208ENST00000533948 NDUFC2-KCTD14E9PQ53 114 aa8.65□□□□□ -1.02
SHARPIN-208ENST00000533948 TRGC2P03986 189 aa8.65□□□□□ -1.02
SHARPIN-208ENST00000533948 RAB5BP61020 215 aa8.65□□□□□ -1.02
SHARPIN-208ENST00000533948 HERVK_113P63121 156 aa8.65□□□□□ -1.02
SHARPIN-208ENST00000533948 KRTAP11-1Q8IUC1 163 aa8.65□□□□□ -1.02
SHARPIN-208ENST00000533948 Q8IZM0 81 aa8.64□□□□□ -1.03
SHARPIN-208ENST00000533948 LINC01549A6NIU2 74 aa8.63□□□□□ -1.03
SHARPIN-208ENST00000533948 LINC00614P0C842 121 aa8.63□□□□□ -1.03
SHARPIN-208ENST00000533948 C9orf129Q5T035 196 aaKnown RBP8.63□□□□□ -1.03
SHARPIN-208ENST00000533948 FAT4Q6V0I7 4981 aa8.62□□□□□ -1.03
SHARPIN-208ENST00000533948 KRTAP9-6A0A140TA67 174 aa8.62□□□□□ -1.03
SHARPIN-208ENST00000533948 RPL13AP40429 203 aaKnown RBP8.62□□□□□ -1.03
SHARPIN-208ENST00000533948 NDUFA6P56556 154 aa8.62□□□□□ -1.03
SHARPIN-208ENST00000533948 M0QXV9 152 aa8.61□□□□□ -1.03
SHARPIN-208ENST00000533948 LINC00469Q8N7U9 141 aa8.61□□□□□ -1.03
SHARPIN-208ENST00000533948 TINCRA0A1B0GVN0 87 aa8.6□□□□□ -1.03
SHARPIN-208ENST00000533948 UBE2BP63146 152 aa8.6□□□□□ -1.03
SHARPIN-208ENST00000533948 BAGE3Q86Y29 109 aa8.6□□□□□ -1.03
SHARPIN-208ENST00000533948 CHCHD1Q96BP2 118 aaKnown RBP8.6□□□□□ -1.03
SHARPIN-208ENST00000533948 CST9LQ9H4G1 147 aa8.6□□□□□ -1.03
SHARPIN-208ENST00000533948 SMIM1B2RUZ4 78 aa8.59□□□□□ -1.03
SHARPIN-208ENST00000533948 F8VRH5 84 aa8.59□□□□□ -1.03
SHARPIN-208ENST00000533948 URB1-AS1Q96HZ7 61 aa8.59□□□□□ -1.03
SHARPIN-208ENST00000533948 IGLV5-45A0A087WSX0 123 aa8.58□□□□□ -1.04
SHARPIN-208ENST00000533948 HBDP02042 147 aa8.58□□□□□ -1.04
SHARPIN-208ENST00000533948 KRTAP1-4P0C5Y4 121 aa8.58□□□□□ -1.04
SHARPIN-208ENST00000533948 PMVKQ15126 192 aa8.58□□□□□ -1.04
SHARPIN-208ENST00000533948 LCE2AQ5TA79 106 aaPredicted RBP8.58□□□□□ -1.04
SHARPIN-208ENST00000533948 XAGE1AQ9HD64 81 aa8.58□□□□□ -1.04
SHARPIN-208ENST00000533948 CXCL5P42830 114 aa8.57□□□□□ -1.04
SHARPIN-208ENST00000533948 PDZD11Q5EBL8 140 aa8.57□□□□□ -1.04
SHARPIN-208ENST00000533948 A0A096LNJ9 63 aa8.56□□□□□ -1.04
SHARPIN-208ENST00000533948 COX7B2Q8TF08 81 aa8.56□□□□□ -1.04
SHARPIN-208ENST00000533948 HSBP1O75506 76 aa8.55□□□□□ -1.04
SHARPIN-208ENST00000533948 SPINK8P0C7L1 97 aa8.55□□□□□ -1.04
SHARPIN-208ENST00000533948 PMCHL1Q16048 86 aa8.55□□□□□ -1.04
SHARPIN-208ENST00000533948 C22orf24Q9Y442 160 aa8.55□□□□□ -1.04
SHARPIN-208ENST00000533948 H3BRM9 83 aa8.54□□□□□ -1.04
SHARPIN-208ENST00000533948 SERF1AO75920 110 aa8.54□□□□□ -1.04
SHARPIN-208ENST00000533948 HIST1H2BKO60814 126 aa8.53□□□□□ -1.04
SHARPIN-208ENST00000533948 ATP5LO75964 103 aa8.53□□□□□ -1.04
SHARPIN-208ENST00000533948 TSPAN13O95857 204 aa8.53□□□□□ -1.04
SHARPIN-208ENST00000533948 HIST1H2BJP06899 126 aa8.53□□□□□ -1.04
SHARPIN-208ENST00000533948 HIST1H2BOP23527 126 aa8.53□□□□□ -1.04
SHARPIN-208ENST00000533948 HIST1H2BBP33778 126 aa8.53□□□□□ -1.04
SHARPIN-208ENST00000533948 HIST1H2BDP58876 126 aa8.53□□□□□ -1.04
SHARPIN-208ENST00000533948 HIST1H2BCP62807 126 aa8.53□□□□□ -1.04
SHARPIN-208ENST00000533948 HIST2H2BEQ16778 126 aa8.53□□□□□ -1.04
SHARPIN-208ENST00000533948 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.53□□□□□ -1.04
SHARPIN-208ENST00000533948 HIST1H2BHQ93079 126 aa8.53□□□□□ -1.04
SHARPIN-208ENST00000533948 HIST1H2BNQ99877 126 aa8.53□□□□□ -1.04
SHARPIN-208ENST00000533948 HIST1H2BMQ99879 126 aa8.53□□□□□ -1.04
SHARPIN-208ENST00000533948 ZNF861PO60384 105 aa8.52□□□□□ -1.05
SHARPIN-208ENST00000533948 IGLC3P0DOY3 106 aa8.52□□□□□ -1.05
SHARPIN-208ENST00000533948 LBHQ53QV2 105 aaPredicted RBP8.51□□□□□ -1.05
SHARPIN-208ENST00000533948 TP73-AS1Q9UF72 201 aa8.51□□□□□ -1.05
SHARPIN-208ENST00000533948 LINC00310P59036 64 aa8.5□□□□□ -1.05
SHARPIN-208ENST00000533948 FAM19A2Q8N3H0 131 aa8.5□□□□□ -1.05
SHARPIN-208ENST00000533948 IGLV5-39A0A0G2JS06 123 aa8.49□□□□□ -1.05
SHARPIN-208ENST00000533948 ZNF22P17026 224 aaPredicted RBP8.49□□□□□ -1.05
SHARPIN-208ENST00000533948 MRPL55Q7Z7F7 128 aaKnown RBP8.49□□□□□ -1.05
SHARPIN-208ENST00000533948 NUPR1O60356 82 aa8.48□□□□□ -1.05
SHARPIN-208ENST00000533948 LEPROTL1O95214 131 aa8.48□□□□□ -1.05
SHARPIN-208ENST00000533948 IFI27L1Q96BM0 104 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms