RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 SCO1O75880 301 aa5.83□□□□□ -1.48
SSBP3-215ENST00000533946 SPINK8P0C7L1 97 aa5.83□□□□□ -1.48
SSBP3-215ENST00000533946 PRR26Q8N8Z3 221 aa5.83□□□□□ -1.48
SSBP3-215ENST00000533946 C2orf88Q9BSF0 95 aa5.83□□□□□ -1.48
SSBP3-215ENST00000533946 CST9LQ9H4G1 147 aa5.83□□□□□ -1.48
SSBP3-215ENST00000533946 NDUFC2-KCTD14E9PQ53 114 aa5.82□□□□□ -1.48
SSBP3-215ENST00000533946 M0QXV9 152 aa5.82□□□□□ -1.48
SSBP3-215ENST00000533946 IGLV7-43P04211 117 aa5.82□□□□□ -1.48
SSBP3-215ENST00000533946 Q6ZN92 141 aa5.82□□□□□ -1.48
SSBP3-215ENST00000533946 ERASQ7Z444 233 aa5.82□□□□□ -1.48
SSBP3-215ENST00000533946 YPEL4Q96NS1 127 aa5.82□□□□□ -1.48
SSBP3-215ENST00000533946 TIMM17AQ99595 171 aa5.82□□□□□ -1.48
SSBP3-215ENST00000533946 TRAV9-1A0A075B6T8 112 aa5.81□□□□□ -1.48
SSBP3-215ENST00000533946 KRTAP1-4P0C5Y4 121 aa5.81□□□□□ -1.48
SSBP3-215ENST00000533946 C6orf226Q5I0X4 101 aa5.81□□□□□ -1.48
SSBP3-215ENST00000533946 Q8NDZ9 215 aa5.81□□□□□ -1.48
SSBP3-215ENST00000533946 C18orf32Q8TCD1 76 aa5.81□□□□□ -1.48
SSBP3-215ENST00000533946 TRBV30A0A0K0K1B3 111 aa5.8□□□□□ -1.48
SSBP3-215ENST00000533946 F8WDY8 70 aa5.8□□□□□ -1.48
SSBP3-215ENST00000533946 APOC3P02656 99 aa5.8□□□□□ -1.48
SSBP3-215ENST00000533946 RAB5BP61020 215 aa5.8□□□□□ -1.48
SSBP3-215ENST00000533946 Q8IZM0 81 aa5.8□□□□□ -1.48
SSBP3-215ENST00000533946 LINC01561Q8N1V8 128 aa5.8□□□□□ -1.48
SSBP3-215ENST00000533946 C22orf24Q9Y442 160 aa5.8□□□□□ -1.48
SSBP3-215ENST00000533946 IGLV5-45A0A087WSX0 123 aa5.79□□□□□ -1.48
SSBP3-215ENST00000533946 TINCRA0A1B0GVN0 87 aa5.79□□□□□ -1.48
SSBP3-215ENST00000533946 K7EMI3 77 aa5.79□□□□□ -1.48
SSBP3-215ENST00000533946 S100PP25815 95 aa5.79□□□□□ -1.48
SSBP3-215ENST00000533946 CKS1BP61024 79 aa5.79□□□□□ -1.48
SSBP3-215ENST00000533946 PACRGQ96M98 296 aaPredicted RBP5.79□□□□□ -1.48
SSBP3-215ENST00000533946 GEMIN7Q9H840 131 aaKnown RBP5.79□□□□□ -1.48
SSBP3-215ENST00000533946 RPL37AP8A6NKH3 93 aa5.78□□□□□ -1.48
SSBP3-215ENST00000533946 PRSS2P07478 247 aa5.78□□□□□ -1.48
SSBP3-215ENST00000533946 NPSP0C0P6 89 aa5.78□□□□□ -1.48
SSBP3-215ENST00000533946 HERVK_113P63121 156 aa5.78□□□□□ -1.48
SSBP3-215ENST00000533946 RHEBQ15382 184 aa5.78□□□□□ -1.48
SSBP3-215ENST00000533946 FA2HQ7L5A8 372 aa5.78□□□□□ -1.48
SSBP3-215ENST00000533946 COX7B2Q8TF08 81 aa5.78□□□□□ -1.48
SSBP3-215ENST00000533946 PKIGQ9Y2B9 76 aa5.78□□□□□ -1.48
SSBP3-215ENST00000533946 TRAPPC1Q9Y5R8 145 aa5.78□□□□□ -1.48
SSBP3-215ENST00000533946 GAGE10A6NGK3 116 aa5.77□□□□□ -1.49
SSBP3-215ENST00000533946 F8VRH5 84 aa5.77□□□□□ -1.49
SSBP3-215ENST00000533946 ZNF22P17026 224 aaPredicted RBP5.77□□□□□ -1.49
SSBP3-215ENST00000533946 NDUFA6P56556 154 aa5.77□□□□□ -1.49
SSBP3-215ENST00000533946 PMVKQ15126 192 aa5.77□□□□□ -1.49
SSBP3-215ENST00000533946 PDZD11Q5EBL8 140 aa5.77□□□□□ -1.49
SSBP3-215ENST00000533946 REG3GQ6UW15 175 aa5.77□□□□□ -1.49
SSBP3-215ENST00000533946 C11orf86A6NJI1 115 aa5.76□□□□□ -1.49
SSBP3-215ENST00000533946 H0Y9J4 135 aa5.76□□□□□ -1.49
SSBP3-215ENST00000533946 LINC00614P0C842 121 aa5.76□□□□□ -1.49
SSBP3-215ENST00000533946 UBE2BP63146 152 aa5.76□□□□□ -1.49
SSBP3-215ENST00000533946 CBLN2Q8IUK8 224 aa5.76□□□□□ -1.49
SSBP3-215ENST00000533946 SLC7A5P1Q8MH63 180 aa5.76□□□□□ -1.49
SSBP3-215ENST00000533946 ZNF625Q96I27 306 aaPredicted RBP5.76□□□□□ -1.49
SSBP3-215ENST00000533946 LINC00167Q96N53 147 aa5.76□□□□□ -1.49
SSBP3-215ENST00000533946 ANAPC11Q9NYG5 84 aa5.76□□□□□ -1.49
SSBP3-215ENST00000533946 IGLC3P0DOY3 106 aa5.75□□□□□ -1.49
SSBP3-215ENST00000533946 SMCO4Q9NRQ5 59 aa5.75□□□□□ -1.49
SSBP3-215ENST00000533946 IGLV5-39A0A0G2JS06 123 aa5.74□□□□□ -1.49
SSBP3-215ENST00000533946 PFN2P35080 140 aa5.74□□□□□ -1.49
SSBP3-215ENST00000533946 LINC00310P59036 64 aa5.74□□□□□ -1.49
SSBP3-215ENST00000533946 A0A087X002 238 aa5.73□□□□□ -1.49
SSBP3-215ENST00000533946 NUPR1O60356 82 aa5.73□□□□□ -1.49
SSBP3-215ENST00000533946 PAPPA-AS1Q5QFB9 102 aa5.73□□□□□ -1.49
SSBP3-215ENST00000533946 BAGE3Q86Y29 109 aa5.73□□□□□ -1.49
SSBP3-215ENST00000533946 FAM19A2Q8N3H0 131 aa5.73□□□□□ -1.49
SSBP3-215ENST00000533946 DIRC1Q969H9 104 aa5.73□□□□□ -1.49
SSBP3-215ENST00000533946 HBDP02042 147 aa5.72□□□□□ -1.49
SSBP3-215ENST00000533946 SEC11AP67812 179 aa5.72□□□□□ -1.49
SSBP3-215ENST00000533946 MRPL55Q7Z7F7 128 aaKnown RBP5.72□□□□□ -1.49
SSBP3-215ENST00000533946 A0A0U1RRA0 63 aa5.71□□□□□ -1.5
SSBP3-215ENST00000533946 TMEM238C9JI98 176 aa5.71□□□□□ -1.5
SSBP3-215ENST00000533946 ZNF861PO60384 105 aa5.71□□□□□ -1.5
SSBP3-215ENST00000533946 G0S2P27469 103 aa5.71□□□□□ -1.5
SSBP3-215ENST00000533946 COX19Q49B96 90 aa5.71□□□□□ -1.5
SSBP3-215ENST00000533946 IGKV2-28A0A075B6P5 120 aa5.7□□□□□ -1.5
SSBP3-215ENST00000533946 SNAPINO95295 136 aa5.7□□□□□ -1.5
SSBP3-215ENST00000533946 IGKV2D-28P01615 120 aa5.7□□□□□ -1.5
SSBP3-215ENST00000533946 VPREB1P12018 145 aa5.7□□□□□ -1.5
SSBP3-215ENST00000533946 KRTAP13-1Q8IUC0 172 aa5.7□□□□□ -1.5
SSBP3-215ENST00000533946 SVBPQ8N300 66 aa5.7□□□□□ -1.5
SSBP3-215ENST00000533946 SND1-IT1Q9HBX3 110 aa5.7□□□□□ -1.5
SSBP3-215ENST00000533946 TRGC2P03986 189 aa5.69□□□□□ -1.5
SSBP3-215ENST00000533946 CXCL5P42830 114 aa5.69□□□□□ -1.5
SSBP3-215ENST00000533946 KRTAP13-2Q52LG2 175 aa5.69□□□□□ -1.5
SSBP3-215ENST00000533946 TMEM170BQ5T4T1 132 aa5.69□□□□□ -1.5
SSBP3-215ENST00000533946 IGLV5-37A0A075B6J1 123 aa5.68□□□□□ -1.5
SSBP3-215ENST00000533946 BCE1O60756 84 aa5.68□□□□□ -1.5
SSBP3-215ENST00000533946 TSPEAR-AS2P59090 65 aa5.68□□□□□ -1.5
SSBP3-215ENST00000533946 TP73-AS1Q9UF72 201 aa5.68□□□□□ -1.5
SSBP3-215ENST00000533946 ERG28Q9UKR5 140 aa5.68□□□□□ -1.5
SSBP3-215ENST00000533946 CHTOPQ9Y3Y2 248 aaKnown RBP5.68□□□□□ -1.5
SSBP3-215ENST00000533946 MUC2Q02817 5179 aa5.68□□□□□ -1.5
SSBP3-215ENST00000533946 TMEM223A0PJW6 202 aa5.67□□□□□ -1.5
SSBP3-215ENST00000533946 H3BRM9 83 aa5.67□□□□□ -1.5
SSBP3-215ENST00000533946 ATP5LO75964 103 aa5.67□□□□□ -1.5
SSBP3-215ENST00000533946 TSPAN13O95857 204 aa5.67□□□□□ -1.5
SSBP3-215ENST00000533946 PRLHP81277 87 aa5.67□□□□□ -1.5
SSBP3-215ENST00000533946 LBHQ53QV2 105 aaPredicted RBP5.67□□□□□ -1.5
SSBP3-215ENST00000533946 IFI27L1Q96BM0 104 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms