RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 FHL2Q14192 279 aa4.98□□□□□ -1.61
TGFBR3-209ENST00000532540 IGF1P05019 195 aa4.98□□□□□ -1.61
TGFBR3-209ENST00000532540 OXLD1Q5BKU9 147 aa4.98□□□□□ -1.61
TGFBR3-209ENST00000532540 SPTSSBQ8NFR3 76 aa4.98□□□□□ -1.61
TGFBR3-209ENST00000532540 ZNF580Q9UK33 172 aa4.98□□□□□ -1.61
TGFBR3-209ENST00000532540 HILS1P60008 231 aa4.98□□□□□ -1.61
TGFBR3-209ENST00000532540 DEFB1P60022 68 aa4.98□□□□□ -1.61
TGFBR3-209ENST00000532540 Q6YL49 198 aa4.98□□□□□ -1.61
TGFBR3-209ENST00000532540 FAM19A1Q7Z5A9 133 aa4.97□□□□□ -1.61
TGFBR3-209ENST00000532540 GPHB5Q86YW7 130 aa4.97□□□□□ -1.61
TGFBR3-209ENST00000532540 ZFAND2AQ8N6M9 145 aa4.97□□□□□ -1.61
TGFBR3-209ENST00000532540 COX7B2Q8TF08 81 aa4.97□□□□□ -1.61
TGFBR3-209ENST00000532540 A6NDX4 124 aa4.97□□□□□ -1.61
TGFBR3-209ENST00000532540 CCKP06307 115 aa4.97□□□□□ -1.61
TGFBR3-209ENST00000532540 NPBQ8NG41 125 aa4.97□□□□□ -1.61
TGFBR3-209ENST00000532540 LINC01006Q8NI28 216 aa4.97□□□□□ -1.61
TGFBR3-209ENST00000532540 NBEAL2Q6ZNJ1 2754 aa4.97□□□□□ -1.61
TGFBR3-209ENST00000532540 IGHV3-16A0A0C4DH30 117 aa4.97□□□□□ -1.61
TGFBR3-209ENST00000532540 M0QY20 66 aa4.97□□□□□ -1.61
TGFBR3-209ENST00000532540 RMI2Q96E14 147 aa4.97□□□□□ -1.61
TGFBR3-209ENST00000532540 C2orf48Q96LS8 159 aa4.97□□□□□ -1.61
TGFBR3-209ENST00000532540 ZFAND3Q9H8U3 227 aa4.97□□□□□ -1.61
TGFBR3-209ENST00000532540 UBE2D4Q9Y2X8 147 aa4.97□□□□□ -1.61
TGFBR3-209ENST00000532540 NDUFA4O00483 81 aa4.96□□□□□ -1.61
TGFBR3-209ENST00000532540 RNASE3P12724 160 aaKnown RBP4.96□□□□□ -1.62
TGFBR3-209ENST00000532540 CCL24O00175 119 aa4.96□□□□□ -1.62
TGFBR3-209ENST00000532540 PDE6GP18545 87 aa4.96□□□□□ -1.62
TGFBR3-209ENST00000532540 PRR9Q5T870 116 aa4.96□□□□□ -1.62
TGFBR3-209ENST00000532540 KRTAP1-3Q8IUG1 177 aa4.96□□□□□ -1.62
TGFBR3-209ENST00000532540 LINC01561Q8N1V8 128 aa4.95□□□□□ -1.62
TGFBR3-209ENST00000532540 CLPSL1A2RUU4 121 aa4.95□□□□□ -1.62
TGFBR3-209ENST00000532540 LY6LH3BQJ8 138 aa4.95□□□□□ -1.62
TGFBR3-209ENST00000532540 RPL28P46779 137 aaKnown RBP4.95□□□□□ -1.62
TGFBR3-209ENST00000532540 USMG5Q96IX5 58 aa4.95□□□□□ -1.62
TGFBR3-209ENST00000532540 UBE2E2Q96LR5 201 aa4.95□□□□□ -1.62
TGFBR3-209ENST00000532540 LINC01600Q96MT4 127 aa4.95□□□□□ -1.62
TGFBR3-209ENST00000532540 Q5XG85 94 aa4.94□□□□□ -1.62
TGFBR3-209ENST00000532540 UNQ9165/PRO28630Q6UXU0 137 aa4.94□□□□□ -1.62
TGFBR3-209ENST00000532540 SMIM11BQ8TCY0 68 aa4.94□□□□□ -1.62
TGFBR3-209ENST00000532540 PDZD2O15018 2839 aa4.94□□□□□ -1.62
TGFBR3-209ENST00000532540 LYRM9A8MSI8 78 aa4.94□□□□□ -1.62
TGFBR3-209ENST00000532540 ESRGQ1W209 222 aa4.94□□□□□ -1.62
TGFBR3-209ENST00000532540 TRGV2A0A075B6R0 118 aa4.94□□□□□ -1.62
TGFBR3-209ENST00000532540 TRGV1A0A0A0MS02 117 aa4.94□□□□□ -1.62
TGFBR3-209ENST00000532540 HTN3P15516 51 aa4.94□□□□□ -1.62
TGFBR3-209ENST00000532540 TRBV10-3A0A0K0K1G6 114 aa4.93□□□□□ -1.62
TGFBR3-209ENST00000532540 IL17DQ8TAD2 202 aa4.93□□□□□ -1.62
TGFBR3-209ENST00000532540 AMELXQ99217 191 aa4.93□□□□□ -1.62
TGFBR3-209ENST00000532540 IGHV3-53P01767 116 aa4.93□□□□□ -1.62
TGFBR3-209ENST00000532540 SCXQ7RTU7 201 aa4.93□□□□□ -1.62
TGFBR3-209ENST00000532540 BCE1O60756 84 aa4.93□□□□□ -1.62
TGFBR3-209ENST00000532540 DEFB131AP59861 70 aa4.93□□□□□ -1.62
TGFBR3-209ENST00000532540 INSP01308 110 aa4.92□□□□□ -1.62
TGFBR3-209ENST00000532540 APRG1Q8IVJ8 170 aa4.92□□□□□ -1.62
TGFBR3-209ENST00000532540 ZNF702PQ9H963 129 aa4.92□□□□□ -1.62
TGFBR3-209ENST00000532540 NREPQ16612 68 aa4.92□□□□□ -1.62
TGFBR3-209ENST00000532540 FAM19A3Q7Z5A8 133 aa4.92□□□□□ -1.62
TGFBR3-209ENST00000532540 A0A087WYN8 130 aa4.92□□□□□ -1.62
TGFBR3-209ENST00000532540 SS18Q15532 418 aa4.92□□□□□ -1.62
TGFBR3-209ENST00000532540 LINC00467Q9BRT7 94 aa4.92□□□□□ -1.62
TGFBR3-209ENST00000532540 PLAC8L1A1L4L8 177 aa4.91□□□□□ -1.62
TGFBR3-209ENST00000532540 A0A096LNT2 108 aa4.91□□□□□ -1.62
TGFBR3-209ENST00000532540 H3BQ85 93 aa4.91□□□□□ -1.62
TGFBR3-209ENST00000532540 KRTAP24-1Q3LI83 254 aa4.91□□□□□ -1.62
TGFBR3-209ENST00000532540 TRGV4A0A0C4DH28 118 aa4.91□□□□□ -1.62
TGFBR3-209ENST00000532540 LRCOL1A6NCL2 159 aa4.91□□□□□ -1.62
TGFBR3-209ENST00000532540 Q8N2B8 174 aa4.91□□□□□ -1.62
TGFBR3-209ENST00000532540 Q8N3U1 123 aa4.91□□□□□ -1.62
TGFBR3-209ENST00000532540 TMEM254Q8TBM7 123 aa4.91□□□□□ -1.62
TGFBR3-209ENST00000532540 LINC00474Q9P2X8 69 aa4.91□□□□□ -1.62
TGFBR3-209ENST00000532540 TRBV10-1A0A0K0K1A3 114 aa4.91□□□□□ -1.62
TGFBR3-209ENST00000532540 CD164Q04900 197 aa4.91□□□□□ -1.62
TGFBR3-209ENST00000532540 PRYO14603 147 aa4.9□□□□□ -1.63
TGFBR3-209ENST00000532540 PSPHP1O15172 72 aa4.9□□□□□ -1.63
TGFBR3-209ENST00000532540 UBE2BP63146 152 aa4.9□□□□□ -1.63
TGFBR3-209ENST00000532540 CCDC140Q96MF4 163 aa4.9□□□□□ -1.63
TGFBR3-209ENST00000532540 WFDC10AQ9H1F0 79 aa4.9□□□□□ -1.63
TGFBR3-209ENST00000532540 FBN1P35555 2871 aaKnown RBP4.9□□□□□ -1.63
TGFBR3-209ENST00000532540 DEFB4AO15263 64 aa4.9□□□□□ -1.63
TGFBR3-209ENST00000532540 EIF4EBP3O60516 100 aaPredicted RBP4.9□□□□□ -1.63
TGFBR3-209ENST00000532540 STHQ8IWL8 128 aa4.9□□□□□ -1.63
TGFBR3-209ENST00000532540 FAM218AQ96MZ4 157 aa4.9□□□□□ -1.63
TGFBR3-209ENST00000532540 KRTAP1-1Q07627 177 aa4.89□□□□□ -1.63
TGFBR3-209ENST00000532540 LINC00482Q8N8I6 264 aa4.89□□□□□ -1.63
TGFBR3-209ENST00000532540 LITAFQ99732 161 aa4.89□□□□□ -1.63
TGFBR3-209ENST00000532540 H7BZZ5 65 aa4.89□□□□□ -1.63
TGFBR3-209ENST00000532540 BPY2O14599 106 aa4.89□□□□□ -1.63
TGFBR3-209ENST00000532540 MRGPRG-AS1Q2M3A8 158 aa4.89□□□□□ -1.63
TGFBR3-209ENST00000532540 IBA57-AS1B1ANH7 110 aa4.89□□□□□ -1.63
TGFBR3-209ENST00000532540 A0A087WZ39 114 aa4.88□□□□□ -1.63
TGFBR3-209ENST00000532540 CHKB-CPT1BH3BT56 60 aa4.88□□□□□ -1.63
TGFBR3-209ENST00000532540 CYSTM1Q9H1C7 97 aa4.88□□□□□ -1.63
TGFBR3-209ENST00000532540 CFHR3Q02985 330 aa4.88□□□□□ -1.63
TGFBR3-209ENST00000532540 Q8N6K4 173 aa4.88□□□□□ -1.63
TGFBR3-209ENST00000532540 KIF25-AS1Q9Y6Z4 181 aa4.88□□□□□ -1.63
TGFBR3-209ENST00000532540 F8W735 103 aaPredicted RBP4.88□□□□□ -1.63
TGFBR3-209ENST00000532540 ZNF561-AS1K7EIQ3 104 aa4.88□□□□□ -1.63
TGFBR3-209ENST00000532540 OXTP01178 125 aa4.88□□□□□ -1.63
TGFBR3-209ENST00000532540 MP68P56378 58 aa4.87□□□□□ -1.63
TGFBR3-209ENST00000532540 KLKP1Q107X0 134 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms