RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 HERVK_113P63121 156 aa8.05□□□□□ -1.12
SF3B2-212ENST00000531589 C6orf226Q5I0X4 101 aa8.05□□□□□ -1.12
SF3B2-212ENST00000531589 C2orf82Q6UX34 121 aa8.05□□□□□ -1.12
SF3B2-212ENST00000531589 FAM19A5Q7Z5A7 132 aaPredicted RBP8.05□□□□□ -1.12
SF3B2-212ENST00000531589 FAM168BA1KXE4 195 aa8.04□□□□□ -1.12
SF3B2-212ENST00000531589 LINC00173Q6ZV60 143 aa8.04□□□□□ -1.12
SF3B2-212ENST00000531589 FAM19A3Q7Z5A8 133 aa8.04□□□□□ -1.12
SF3B2-212ENST00000531589 TOMM7Q9P0U1 55 aa8.04□□□□□ -1.12
SF3B2-212ENST00000531589 TRAPPC1Q9Y5R8 145 aa8.04□□□□□ -1.12
SF3B2-212ENST00000531589 LINC01549A6NIU2 74 aa8.03□□□□□ -1.12
SF3B2-212ENST00000531589 UBE2BP63146 152 aa8.03□□□□□ -1.12
SF3B2-212ENST00000531589 Q8IZM0 81 aa8.03□□□□□ -1.12
SF3B2-212ENST00000531589 TIMM17AQ99595 171 aa8.03□□□□□ -1.12
SF3B2-212ENST00000531589 ALKBH7Q9BT30 221 aaPredicted RBP8.03□□□□□ -1.12
SF3B2-212ENST00000531589 GEMIN7Q9H840 131 aaKnown RBP8.03□□□□□ -1.12
SF3B2-212ENST00000531589 SMCO4Q9NRQ5 59 aa8.03□□□□□ -1.12
SF3B2-212ENST00000531589 TNXBP22105 4242 aa8.02□□□□□ -1.12
SF3B2-212ENST00000531589 M0QXV9 152 aa8.02□□□□□ -1.13
SF3B2-212ENST00000531589 ZC2HC1BQ5TFG8 222 aa8.02□□□□□ -1.13
SF3B2-212ENST00000531589 TOMM6Q96B49 74 aa8.02□□□□□ -1.13
SF3B2-212ENST00000531589 ERASQ7Z444 233 aa8.01□□□□□ -1.13
SF3B2-212ENST00000531589 H0Y9J4 135 aa8□□□□□ -1.13
SF3B2-212ENST00000531589 COX19Q49B96 90 aa8□□□□□ -1.13
SF3B2-212ENST00000531589 SCGB3A1Q96QR1 104 aa8□□□□□ -1.13
SF3B2-212ENST00000531589 CDKN2A-AS1Q9UH64 79 aa8□□□□□ -1.13
SF3B2-212ENST00000531589 F8VRH5 84 aa7.99□□□□□ -1.13
SF3B2-212ENST00000531589 CXCL5P42830 114 aa7.99□□□□□ -1.13
SF3B2-212ENST00000531589 ODF1Q14990 250 aa7.99□□□□□ -1.13
SF3B2-212ENST00000531589 C9orf129Q5T035 196 aaKnown RBP7.99□□□□□ -1.13
SF3B2-212ENST00000531589 LBHQ53QV2 105 aaPredicted RBP7.98□□□□□ -1.13
SF3B2-212ENST00000531589 KRTAP7-1Q8IUC3 87 aa7.98□□□□□ -1.13
SF3B2-212ENST00000531589 KRTAP11-1Q8IUC1 163 aa7.97□□□□□ -1.13
SF3B2-212ENST00000531589 LINC00469Q8N7U9 141 aa7.97□□□□□ -1.13
SF3B2-212ENST00000531589 C18orf32Q8TCD1 76 aa7.97□□□□□ -1.13
SF3B2-212ENST00000531589 URB1-AS1Q96HZ7 61 aa7.97□□□□□ -1.13
SF3B2-212ENST00000531589 IGLV1-50A0A075B6I6 118 aa7.96□□□□□ -1.14
SF3B2-212ENST00000531589 TINCRA0A1B0GVN0 87 aa7.96□□□□□ -1.14
SF3B2-212ENST00000531589 COLCA2A8K830 154 aa7.96□□□□□ -1.14
SF3B2-212ENST00000531589 PDZD11Q5EBL8 140 aa7.96□□□□□ -1.14
SF3B2-212ENST00000531589 PRR26Q8N8Z3 221 aa7.96□□□□□ -1.14
SF3B2-212ENST00000531589 LINC01546A6NGU7 62 aa7.95□□□□□ -1.14
SF3B2-212ENST00000531589 NUPR1O60356 82 aa7.95□□□□□ -1.14
SF3B2-212ENST00000531589 TRGC2P03986 189 aa7.95□□□□□ -1.14
SF3B2-212ENST00000531589 PMCHL1Q16048 86 aa7.95□□□□□ -1.14
SF3B2-212ENST00000531589 FA2HQ7L5A8 372 aa7.95□□□□□ -1.14
SF3B2-212ENST00000531589 XAGE1AQ9HD64 81 aa7.95□□□□□ -1.14
SF3B2-212ENST00000531589 C22orf24Q9Y442 160 aa7.95□□□□□ -1.14
SF3B2-212ENST00000531589 ATP6V1G1O75348 118 aa7.94□□□□□ -1.14
SF3B2-212ENST00000531589 CST9LQ9H4G1 147 aa7.94□□□□□ -1.14
SF3B2-212ENST00000531589 TP73-AS1Q9UF72 201 aa7.94□□□□□ -1.14
SF3B2-212ENST00000531589 IGLV5-45A0A087WSX0 123 aa7.93□□□□□ -1.14
SF3B2-212ENST00000531589 SMIM1B2RUZ4 78 aa7.93□□□□□ -1.14
SF3B2-212ENST00000531589 ZNF861PO60384 105 aa7.93□□□□□ -1.14
SF3B2-212ENST00000531589 RPL13AP40429 203 aaKnown RBP7.93□□□□□ -1.14
SF3B2-212ENST00000531589 PMVKQ15126 192 aa7.93□□□□□ -1.14
SF3B2-212ENST00000531589 COX7B2Q8TF08 81 aa7.93□□□□□ -1.14
SF3B2-212ENST00000531589 H3BRM9 83 aa7.92□□□□□ -1.14
SF3B2-212ENST00000531589 MRPL55Q7Z7F7 128 aaKnown RBP7.92□□□□□ -1.14
SF3B2-212ENST00000531589 A0A096LNJ9 63 aa7.91□□□□□ -1.14
SF3B2-212ENST00000531589 LRP2P98164 4655 aa7.91□□□□□ -1.14
SF3B2-212ENST00000531589 KRTAP1-4P0C5Y4 121 aa7.9□□□□□ -1.14
SF3B2-212ENST00000531589 LINC00614P0C842 121 aa7.9□□□□□ -1.14
SF3B2-212ENST00000531589 ATP5LO75964 103 aa7.89□□□□□ -1.15
SF3B2-212ENST00000531589 SPINK8P0C7L1 97 aa7.89□□□□□ -1.15
SF3B2-212ENST00000531589 RPL28P46779 137 aaKnown RBP7.89□□□□□ -1.15
SF3B2-212ENST00000531589 BCE1O60756 84 aa7.88□□□□□ -1.15
SF3B2-212ENST00000531589 RAB5BP61020 215 aa7.88□□□□□ -1.15
SF3B2-212ENST00000531589 BAGE3Q86Y29 109 aa7.88□□□□□ -1.15
SF3B2-212ENST00000531589 NDUFA6P56556 154 aa7.87□□□□□ -1.15
SF3B2-212ENST00000531589 LINC00310P59036 64 aa7.87□□□□□ -1.15
SF3B2-212ENST00000531589 FAM19A2Q8N3H0 131 aa7.87□□□□□ -1.15
SF3B2-212ENST00000531589 HBDP02042 147 aa7.86□□□□□ -1.15
SF3B2-212ENST00000531589 IGLC3P0DOY3 106 aa7.86□□□□□ -1.15
SF3B2-212ENST00000531589 NKAPP1Q8N9T2 125 aa7.86□□□□□ -1.15
SF3B2-212ENST00000531589 LINC00167Q96N53 147 aa7.86□□□□□ -1.15
SF3B2-212ENST00000531589 IGLV5-37A0A075B6J1 123 aa7.85□□□□□ -1.15
SF3B2-212ENST00000531589 SERF1AO75920 110 aa7.85□□□□□ -1.15
SF3B2-212ENST00000531589 S100A1P23297 94 aa7.85□□□□□ -1.15
SF3B2-212ENST00000531589 IGLV5-39A0A0G2JS06 123 aa7.84□□□□□ -1.15
SF3B2-212ENST00000531589 RPL37AP8A6NKH3 93 aa7.84□□□□□ -1.15
SF3B2-212ENST00000531589 SFTA2Q6UW10 78 aa7.84□□□□□ -1.15
SF3B2-212ENST00000531589 GAGE10A6NGK3 116 aa7.83□□□□□ -1.16
SF3B2-212ENST00000531589 COX17Q14061 63 aa7.83□□□□□ -1.16
SF3B2-212ENST00000531589 CHCHD1Q96BP2 118 aaKnown RBP7.83□□□□□ -1.16
SF3B2-212ENST00000531589 HIST1H2BKO60814 126 aa7.82□□□□□ -1.16
SF3B2-212ENST00000531589 HSBP1O75506 76 aa7.82□□□□□ -1.16
SF3B2-212ENST00000531589 HIST1H2BJP06899 126 aa7.82□□□□□ -1.16
SF3B2-212ENST00000531589 CRYGAP11844 174 aa7.82□□□□□ -1.16
SF3B2-212ENST00000531589 HIST1H2BOP23527 126 aa7.82□□□□□ -1.16
SF3B2-212ENST00000531589 HIST1H2BBP33778 126 aa7.82□□□□□ -1.16
SF3B2-212ENST00000531589 PFN2P35080 140 aa7.82□□□□□ -1.16
SF3B2-212ENST00000531589 HIST1H2BDP58876 126 aa7.82□□□□□ -1.16
SF3B2-212ENST00000531589 HIST1H2BCP62807 126 aa7.82□□□□□ -1.16
SF3B2-212ENST00000531589 HIST2H2BEQ16778 126 aa7.82□□□□□ -1.16
SF3B2-212ENST00000531589 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.82□□□□□ -1.16
SF3B2-212ENST00000531589 HIST1H2BHQ93079 126 aa7.82□□□□□ -1.16
SF3B2-212ENST00000531589 HIST1H2BNQ99877 126 aa7.82□□□□□ -1.16
SF3B2-212ENST00000531589 HIST1H2BMQ99879 126 aa7.82□□□□□ -1.16
SF3B2-212ENST00000531589 RNF213Q63HN8 5207 aa7.82□□□□□ -1.16
SF3B2-212ENST00000531589 ZNF22P17026 224 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms