RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 M0QY20 66 aa2.99□□□□□ -1.93
CASP4-210ENST00000531546 IGLC6P0CF74 106 aa2.99□□□□□ -1.93
CASP4-210ENST00000531546 GZMBP10144 247 aa2.99□□□□□ -1.93
CASP4-210ENST00000531546 MEF2BQ02080 365 aaPredicted RBP2.99□□□□□ -1.93
CASP4-210ENST00000531546 SMAGPQ0VAQ4 97 aa2.99□□□□□ -1.93
CASP4-210ENST00000531546 IQCJQ1A5X6 159 aa2.99□□□□□ -1.93
CASP4-210ENST00000531546 MPV17L2Q567V2 206 aa2.99□□□□□ -1.93
CASP4-210ENST00000531546 NTM-AS1Q6ZSK4 140 aa2.99□□□□□ -1.93
CASP4-210ENST00000531546 TCTE3Q8IZS6 198 aa2.99□□□□□ -1.93
CASP4-210ENST00000531546 C9orf62Q8N4C0 152 aa2.99□□□□□ -1.93
CASP4-210ENST00000531546 SIGMAR1Q99720 223 aa2.99□□□□□ -1.93
CASP4-210ENST00000531546 CHAC1Q9BUX1 264 aa2.99□□□□□ -1.93
CASP4-210ENST00000531546 MED9Q9NWA0 146 aa2.99□□□□□ -1.93
CASP4-210ENST00000531546 IGHV1-24A0A0C4DH33 117 aa2.98□□□□□ -1.93
CASP4-210ENST00000531546 MGPP08493 103 aa2.98□□□□□ -1.93
CASP4-210ENST00000531546 TRGC1P0CF51 173 aa2.98□□□□□ -1.93
CASP4-210ENST00000531546 BCL2P10415 239 aa2.98□□□□□ -1.93
CASP4-210ENST00000531546 NTF3P20783 257 aa2.98□□□□□ -1.93
CASP4-210ENST00000531546 KRTAP5-7Q6L8G8 165 aa2.98□□□□□ -1.93
CASP4-210ENST00000531546 RASL11AQ6T310 242 aa2.98□□□□□ -1.93
CASP4-210ENST00000531546 LYZL1Q6UWQ5 148 aa2.98□□□□□ -1.93
CASP4-210ENST00000531546 LINC00269Q8N2A0 174 aa2.98□□□□□ -1.93
CASP4-210ENST00000531546 RNF185Q96GF1 192 aa2.98□□□□□ -1.93
CASP4-210ENST00000531546 NIT2Q9NQR4 276 aa2.98□□□□□ -1.93
CASP4-210ENST00000531546 TRBV20OR9-2A0A075B6H5 130 aa2.97□□□□□ -1.93
CASP4-210ENST00000531546 DLEU1O43261 78 aa2.97□□□□□ -1.93
CASP4-210ENST00000531546 HLA-DQA1P01909 254 aa2.97□□□□□ -1.93
CASP4-210ENST00000531546 S100A8P05109 93 aa2.97□□□□□ -1.93
CASP4-210ENST00000531546 SCGB1A1P11684 91 aa2.97□□□□□ -1.93
CASP4-210ENST00000531546 AKR1D1P51857 326 aa2.97□□□□□ -1.93
CASP4-210ENST00000531546 RAB5BP61020 215 aa2.97□□□□□ -1.93
CASP4-210ENST00000531546 Q6ZRU5 148 aa2.97□□□□□ -1.93
CASP4-210ENST00000531546 CIRBP-AS1Q8TBR5 109 aa2.97□□□□□ -1.93
CASP4-210ENST00000531546 C14orf144Q96I85 54 aa2.97□□□□□ -1.93
CASP4-210ENST00000531546 BTF3L4Q96K17 158 aa2.97□□□□□ -1.93
CASP4-210ENST00000531546 TMEM243Q9BU79 118 aa2.97□□□□□ -1.93
CASP4-210ENST00000531546 CNFNQ9BYD5 112 aa2.97□□□□□ -1.93
CASP4-210ENST00000531546 A0A1B0GXF2 115 aa2.96□□□□□ -1.94
CASP4-210ENST00000531546 TSTD3H0UI37 97 aa2.96□□□□□ -1.94
CASP4-210ENST00000531546 TMEM250H0YL14 139 aa2.96□□□□□ -1.94
CASP4-210ENST00000531546 UBE2L6O14933 153 aa2.96□□□□□ -1.94
CASP4-210ENST00000531546 SCO1O75880 301 aa2.96□□□□□ -1.94
CASP4-210ENST00000531546 CTRLP40313 264 aa2.96□□□□□ -1.94
CASP4-210ENST00000531546 REG3AQ06141 175 aa2.96□□□□□ -1.94
CASP4-210ENST00000531546 KRTAP26-1Q6PEX3 210 aa2.96□□□□□ -1.94
CASP4-210ENST00000531546 CLPSL2Q6UWE3 100 aa2.96□□□□□ -1.94
CASP4-210ENST00000531546 TEX261Q6UWH6 196 aa2.96□□□□□ -1.94
CASP4-210ENST00000531546 C9orf163Q8N9P6 203 aa2.96□□□□□ -1.94
CASP4-210ENST00000531546 NKAPP1Q8N9T2 125 aa2.96□□□□□ -1.94
CASP4-210ENST00000531546 C20orf203Q8NBC4 194 aa2.96□□□□□ -1.94
CASP4-210ENST00000531546 RNASE7Q9H1E1 156 aaKnown RBP2.96□□□□□ -1.94
CASP4-210ENST00000531546 RPP21Q9H633 154 aaKnown RBP2.96□□□□□ -1.94
CASP4-210ENST00000531546 IGLV4-60A0A075B6I1 120 aa2.95□□□□□ -1.94
CASP4-210ENST00000531546 IGLV10-54A0A075B6I4 117 aa2.95□□□□□ -1.94
CASP4-210ENST00000531546 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.95□□□□□ -1.94
CASP4-210ENST00000531546 A8MWL6 223 aa2.95□□□□□ -1.94
CASP4-210ENST00000531546 NCR2O95944 276 aa2.95□□□□□ -1.94
CASP4-210ENST00000531546 ESDP10768 282 aa2.95□□□□□ -1.94
CASP4-210ENST00000531546 FOXA3P55318 350 aaPredicted RBP2.95□□□□□ -1.94
CASP4-210ENST00000531546 CNBPP62633 177 aaKnown RBP2.95□□□□□ -1.94
CASP4-210ENST00000531546 TEX43Q6ZNM6 134 aa2.95□□□□□ -1.94
CASP4-210ENST00000531546 SDIM1Q6ZPB5 146 aa2.95□□□□□ -1.94
CASP4-210ENST00000531546 SMIM20Q8N5G0 67 aa2.95□□□□□ -1.94
CASP4-210ENST00000531546 IGHV3-64A0A075B6Q5 118 aa2.94□□□□□ -1.94
CASP4-210ENST00000531546 TRAV26-2A0A0B4J265 109 aa2.94□□□□□ -1.94
CASP4-210ENST00000531546 PANO1I0J062 215 aa2.94□□□□□ -1.94
CASP4-210ENST00000531546 KIAA0087Q14695 138 aa2.94□□□□□ -1.94
CASP4-210ENST00000531546 AMMECR1LQ6DCA0 310 aa2.94□□□□□ -1.94
CASP4-210ENST00000531546 ALKAL2Q6UX46 152 aa2.94□□□□□ -1.94
CASP4-210ENST00000531546 GTSF1Q8WW33 167 aa2.94□□□□□ -1.94
CASP4-210ENST00000531546 BORCS7Q96B45 105 aa2.94□□□□□ -1.94
CASP4-210ENST00000531546 DPH3Q96FX2 82 aa2.94□□□□□ -1.94
CASP4-210ENST00000531546 CARHSP1Q9Y2V2 147 aaKnown RBP2.94□□□□□ -1.94
CASP4-210ENST00000531546 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
CASP4-210ENST00000531546 TRBV6-5A0A0K0K1A5 114 aa2.93□□□□□ -1.94
CASP4-210ENST00000531546 LINC00862A6NCI5 91 aa2.93□□□□□ -1.94
CASP4-210ENST00000531546 SDHAF1A6NFY7 115 aa2.93□□□□□ -1.94
CASP4-210ENST00000531546 C8orf87E5RJ46 101 aa2.93□□□□□ -1.94
CASP4-210ENST00000531546 I3L3M4 83 aa2.93□□□□□ -1.94
CASP4-210ENST00000531546 NDUFS5O43920 106 aa2.93□□□□□ -1.94
CASP4-210ENST00000531546 APCSP02743 223 aa2.93□□□□□ -1.94
CASP4-210ENST00000531546 FGF6P10767 208 aa2.93□□□□□ -1.94
CASP4-210ENST00000531546 ZNF25P17030 456 aaPredicted RBP2.93□□□□□ -1.94
CASP4-210ENST00000531546 CIRBPQ14011 172 aaKnown RBP2.93□□□□□ -1.94
CASP4-210ENST00000531546 TSKUQ8WUA8 353 aa2.93□□□□□ -1.94
CASP4-210ENST00000531546 RPL39LQ96EH5 51 aaKnown RBP2.93□□□□□ -1.94
CASP4-210ENST00000531546 TMEM101Q96IK0 257 aa2.93□□□□□ -1.94
CASP4-210ENST00000531546 SMIM7Q9BQ49 75 aa2.93□□□□□ -1.94
CASP4-210ENST00000531546 EIF5A2Q9GZV4 153 aaKnown RBP2.93□□□□□ -1.94
CASP4-210ENST00000531546 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.92□□□□□ -1.94
CASP4-210ENST00000531546 IGKV3OR2-268A0A0C4DH90 116 aa2.92□□□□□ -1.94
CASP4-210ENST00000531546 A0A0J9YXV3 536 aa2.92□□□□□ -1.94
CASP4-210ENST00000531546 A0A1B0GUT8 65 aa2.92□□□□□ -1.94
CASP4-210ENST00000531546 IGKV2-29A2NJV5 120 aaPredicted RBP2.92□□□□□ -1.94
CASP4-210ENST00000531546 ZNF727A8MUV8 499 aa2.92□□□□□ -1.94
CASP4-210ENST00000531546 HIGD1CA8MV81 97 aa2.92□□□□□ -1.94
CASP4-210ENST00000531546 PPP1R17O96001 155 aa2.92□□□□□ -1.94
CASP4-210ENST00000531546 RPS10P46783 165 aaKnown RBP2.92□□□□□ -1.94
CASP4-210ENST00000531546 PSMB2P49721 201 aa2.92□□□□□ -1.94
CASP4-210ENST00000531546 PRR4Q16378 134 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms