RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 CDKN2A-AS1Q9UH64 79 aa10.87□□□□□ -0.67
SSSCA1-206ENST00000531405 MRPL55Q7Z7F7 128 aaKnown RBP10.86□□□□□ -0.67
SSSCA1-206ENST00000531405 F8VRH5 84 aa10.85□□□□□ -0.67
SSSCA1-206ENST00000531405 ORMDL2Q53FV1 153 aa10.85□□□□□ -0.67
SSSCA1-206ENST00000531405 BCE1O60756 84 aa10.84□□□□□ -0.67
SSSCA1-206ENST00000531405 RPL28P46779 137 aaKnown RBP10.84□□□□□ -0.67
SSSCA1-206ENST00000531405 HERVK_113P63121 156 aa10.84□□□□□ -0.67
SSSCA1-206ENST00000531405 CLLU1Q5K131 121 aa10.84□□□□□ -0.67
SSSCA1-206ENST00000531405 TP73-AS1Q9UF72 201 aa10.84□□□□□ -0.67
SSSCA1-206ENST00000531405 RPL37AP8A6NKH3 93 aa10.83□□□□□ -0.68
SSSCA1-206ENST00000531405 NPSP0C0P6 89 aa10.83□□□□□ -0.68
SSSCA1-206ENST00000531405 TYMSOSQ8TAI1 123 aa10.83□□□□□ -0.68
SSSCA1-206ENST00000531405 GEMIN7Q9H840 131 aaKnown RBP10.83□□□□□ -0.68
SSSCA1-206ENST00000531405 ANAPC11Q9NYG5 84 aa10.83□□□□□ -0.68
SSSCA1-206ENST00000531405 A0A0U1RQV1 116 aa10.82□□□□□ -0.68
SSSCA1-206ENST00000531405 CRYGAP11844 174 aa10.81□□□□□ -0.68
SSSCA1-206ENST00000531405 RAB14P61106 215 aa10.81□□□□□ -0.68
SSSCA1-206ENST00000531405 LINC00167Q96N53 147 aa10.81□□□□□ -0.68
SSSCA1-206ENST00000531405 GAGE10A6NGK3 116 aa10.8□□□□□ -0.68
SSSCA1-206ENST00000531405 K7EMI3 77 aa10.8□□□□□ -0.68
SSSCA1-206ENST00000531405 SEC11AP67812 179 aa10.8□□□□□ -0.68
SSSCA1-206ENST00000531405 FAT4Q6V0I7 4981 aa10.8□□□□□ -0.68
SSSCA1-206ENST00000531405 SMIM1B2RUZ4 78 aa10.79□□□□□ -0.68
SSSCA1-206ENST00000531405 KRTAP9-2Q9BYQ4 174 aa10.79□□□□□ -0.68
SSSCA1-206ENST00000531405 NXT2Q9NPJ8 142 aaKnown RBP10.79□□□□□ -0.68
SSSCA1-206ENST00000531405 CXCL5P42830 114 aa10.78□□□□□ -0.68
SSSCA1-206ENST00000531405 PAPPA-AS1Q5QFB9 102 aa10.78□□□□□ -0.68
SSSCA1-206ENST00000531405 TOMM6Q96B49 74 aa10.78□□□□□ -0.68
SSSCA1-206ENST00000531405 TIMM17AQ99595 171 aa10.78□□□□□ -0.68
SSSCA1-206ENST00000531405 MT-ND4LP03901 98 aa10.77□□□□□ -0.69
SSSCA1-206ENST00000531405 NDUFA5Q16718 116 aa10.77□□□□□ -0.69
SSSCA1-206ENST00000531405 KRTAP13-2Q52LG2 175 aa10.77□□□□□ -0.69
SSSCA1-206ENST00000531405 ANAPC16Q96DE5 110 aa10.77□□□□□ -0.69
SSSCA1-206ENST00000531405 RETNLBQ9BQ08 111 aa10.77□□□□□ -0.69
SSSCA1-206ENST00000531405 PNRC1Q12796 327 aaPredicted RBP10.76□□□□□ -0.69
SSSCA1-206ENST00000531405 COX7B2Q8TF08 81 aa10.76□□□□□ -0.69
SSSCA1-206ENST00000531405 ADCYAP1P18509 176 aa10.75□□□□□ -0.69
SSSCA1-206ENST00000531405 RAB5BP61020 215 aa10.75□□□□□ -0.69
SSSCA1-206ENST00000531405 KIAA1644Q3SXP7 199 aa10.75□□□□□ -0.69
SSSCA1-206ENST00000531405 KRTAP13-1Q8IUC0 172 aa10.75□□□□□ -0.69
SSSCA1-206ENST00000531405 SCO1O75880 301 aa10.74□□□□□ -0.69
SSSCA1-206ENST00000531405 UBE2AP49459 152 aa10.74□□□□□ -0.69
SSSCA1-206ENST00000531405 PDZD11Q5EBL8 140 aa10.74□□□□□ -0.69
SSSCA1-206ENST00000531405 SCGB3A1Q96QR1 104 aa10.74□□□□□ -0.69
SSSCA1-206ENST00000531405 MUC17Q685J3 4493 aa10.74□□□□□ -0.69
SSSCA1-206ENST00000531405 TINCRA0A1B0GVN0 87 aa10.73□□□□□ -0.69
SSSCA1-206ENST00000531405 SPINK8P0C7L1 97 aa10.73□□□□□ -0.69
SSSCA1-206ENST00000531405 G0S2P27469 103 aa10.73□□□□□ -0.69
SSSCA1-206ENST00000531405 ERASQ7Z444 233 aa10.73□□□□□ -0.69
SSSCA1-206ENST00000531405 IGLV5-37A0A075B6J1 123 aa10.72□□□□□ -0.69
SSSCA1-206ENST00000531405 LCE2AQ5TA79 106 aaPredicted RBP10.72□□□□□ -0.69
SSSCA1-206ENST00000531405 NKAPP1Q8N9T2 125 aa10.72□□□□□ -0.69
SSSCA1-206ENST00000531405 IGKV2-28A0A075B6P5 120 aa10.71□□□□□ -0.69
SSSCA1-206ENST00000531405 IGLV5-45A0A087WSX0 123 aa10.71□□□□□ -0.69
SSSCA1-206ENST00000531405 IGKV2D-28P01615 120 aa10.71□□□□□ -0.69
SSSCA1-206ENST00000531405 LINC00304Q8N9R0 145 aa10.7□□□□□ -0.7
SSSCA1-206ENST00000531405 FAM229BQ4G0N7 80 aa10.69□□□□□ -0.7
SSSCA1-206ENST00000531405 PRLHP81277 87 aa10.68□□□□□ -0.7
SSSCA1-206ENST00000531405 CST9LQ9H4G1 147 aa10.68□□□□□ -0.7
SSSCA1-206ENST00000531405 UQCC3Q6UW78 93 aa10.67□□□□□ -0.7
SSSCA1-206ENST00000531405 COMMD7Q86VX2 200 aa10.66□□□□□ -0.7
SSSCA1-206ENST00000531405 PFN2P35080 140 aa10.65□□□□□ -0.7
SSSCA1-206ENST00000531405 SLC7A5P1Q8MH63 180 aa10.65□□□□□ -0.7
SSSCA1-206ENST00000531405 CDIP1Q9H305 208 aa10.65□□□□□ -0.7
SSSCA1-206ENST00000531405 IGKV2D-26A0A0A0MRZ7 120 aa10.64□□□□□ -0.71
SSSCA1-206ENST00000531405 TMEM238C9JI98 176 aa10.64□□□□□ -0.71
SSSCA1-206ENST00000531405 ATP5LO75964 103 aa10.64□□□□□ -0.71
SSSCA1-206ENST00000531405 PMVKQ15126 192 aa10.64□□□□□ -0.71
SSSCA1-206ENST00000531405 LINC01546A6NGU7 62 aa10.63□□□□□ -0.71
SSSCA1-206ENST00000531405 TPRXLQ17RH7 258 aa10.63□□□□□ -0.71
SSSCA1-206ENST00000531405 FAM19A1Q7Z5A9 133 aa10.63□□□□□ -0.71
SSSCA1-206ENST00000531405 IGLV7-46A0A075B6I9 117 aa10.62□□□□□ -0.71
SSSCA1-206ENST00000531405 VPREB1P12018 145 aa10.62□□□□□ -0.71
SSSCA1-206ENST00000531405 TMEM126AQ9H061 195 aa10.62□□□□□ -0.71
SSSCA1-206ENST00000531405 H3BRM9 83 aa10.61□□□□□ -0.71
SSSCA1-206ENST00000531405 MRPL18Q9H0U6 180 aaKnown RBP10.61□□□□□ -0.71
SSSCA1-206ENST00000531405 SND1-IT1Q9HBX3 110 aa10.61□□□□□ -0.71
SSSCA1-206ENST00000531405 C3orf22Q8N5N4 141 aa10.6□□□□□ -0.71
SSSCA1-206ENST00000531405 Q8NDZ9 215 aa10.6□□□□□ -0.71
SSSCA1-206ENST00000531405 IGLV5-39A0A0G2JS06 123 aa10.59□□□□□ -0.71
SSSCA1-206ENST00000531405 LINC01549A6NIU2 74 aa10.59□□□□□ -0.71
SSSCA1-206ENST00000531405 M0R378 163 aa10.59□□□□□ -0.71
SSSCA1-206ENST00000531405 ERG28Q9UKR5 140 aa10.59□□□□□ -0.71
SSSCA1-206ENST00000531405 IGLC3P0DOY3 106 aa10.58□□□□□ -0.72
SSSCA1-206ENST00000531405 FA2HQ7L5A8 372 aa10.58□□□□□ -0.72
SSSCA1-206ENST00000531405 PLEKHB2Q96CS7 222 aa10.58□□□□□ -0.72
SSSCA1-206ENST00000531405 TRAV9-1A0A075B6T8 112 aa10.57□□□□□ -0.72
SSSCA1-206ENST00000531405 TMEM218A2RU14 115 aa10.57□□□□□ -0.72
SSSCA1-206ENST00000531405 ZNF625Q96I27 306 aaPredicted RBP10.57□□□□□ -0.72
SSSCA1-206ENST00000531405 GNB1LQ9BYB4 327 aa10.57□□□□□ -0.72
SSSCA1-206ENST00000531405 SMCO4Q9NRQ5 59 aa10.57□□□□□ -0.72
SSSCA1-206ENST00000531405 ZNF22P17026 224 aaPredicted RBP10.56□□□□□ -0.72
SSSCA1-206ENST00000531405 NDUFA6P56556 154 aa10.56□□□□□ -0.72
SSSCA1-206ENST00000531405 C10orf91Q5T1B1 145 aa10.56□□□□□ -0.72
SSSCA1-206ENST00000531405 ATP6V1G1O75348 118 aa10.55□□□□□ -0.72
SSSCA1-206ENST00000531405 RPL24P83731 157 aaKnown RBP10.55□□□□□ -0.72
SSSCA1-206ENST00000531405 CBLN2Q8IUK8 224 aa10.55□□□□□ -0.72
SSSCA1-206ENST00000531405 PPDPFQ9H3Y8 114 aa10.55□□□□□ -0.72
SSSCA1-206ENST00000531405 S100A1P23297 94 aa10.54□□□□□ -0.72
SSSCA1-206ENST00000531405 HIGD2AQ9BW72 106 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms