RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 UPK3BQ9BT76 320 aa7.35□□□□□ -1.23
SRPRA-205ENST00000531104 MGAM2Q2M2H8 2515 aa7.34□□□□□ -1.23
SRPRA-205ENST00000531104 A0A0B4J2C4 111 aa7.34□□□□□ -1.23
SRPRA-205ENST00000531104 TOMM7Q9P0U1 55 aa7.34□□□□□ -1.23
SRPRA-205ENST00000531104 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.33□□□□□ -1.24
SRPRA-205ENST00000531104 IBA57-AS1B1ANH7 110 aa7.33□□□□□ -1.24
SRPRA-205ENST00000531104 H3BUT2 72 aa7.33□□□□□ -1.24
SRPRA-205ENST00000531104 CRPP02741 224 aa7.33□□□□□ -1.24
SRPRA-205ENST00000531104 LINC00308Q8TCZ7 52 aa7.33□□□□□ -1.24
SRPRA-205ENST00000531104 UBE2WQ96B02 151 aa7.33□□□□□ -1.24
SRPRA-205ENST00000531104 A0A1W2PPM0 123 aa7.32□□□□□ -1.24
SRPRA-205ENST00000531104 CXCL5P42830 114 aa7.32□□□□□ -1.24
SRPRA-205ENST00000531104 C6orf226Q5I0X4 101 aa7.32□□□□□ -1.24
SRPRA-205ENST00000531104 SOSTDC1Q6X4U4 206 aa7.32□□□□□ -1.24
SRPRA-205ENST00000531104 APOMO95445 188 aa7.31□□□□□ -1.24
SRPRA-205ENST00000531104 PRSS2P07478 247 aa7.31□□□□□ -1.24
SRPRA-205ENST00000531104 MALP21145 153 aa7.31□□□□□ -1.24
SRPRA-205ENST00000531104 CCL18P55774 89 aa7.31□□□□□ -1.24
SRPRA-205ENST00000531104 UBE2V1Q13404 147 aa7.31□□□□□ -1.24
SRPRA-205ENST00000531104 MEIG1Q5JSS6 88 aa7.31□□□□□ -1.24
SRPRA-205ENST00000531104 DAND5Q8N907 189 aa7.31□□□□□ -1.24
SRPRA-205ENST00000531104 COPS9Q8WXC6 57 aa7.31□□□□□ -1.24
SRPRA-205ENST00000531104 NAA38Q9BRA0 125 aaKnown RBP7.31□□□□□ -1.24
SRPRA-205ENST00000531104 APLNQ9ULZ1 77 aa7.31□□□□□ -1.24
SRPRA-205ENST00000531104 TSPAN13O95857 204 aa7.3□□□□□ -1.24
SRPRA-205ENST00000531104 VAMP3Q15836 100 aa7.3□□□□□ -1.24
SRPRA-205ENST00000531104 PRO1854Q9UHT4 67 aa7.3□□□□□ -1.24
SRPRA-205ENST00000531104 ERG28Q9UKR5 140 aa7.3□□□□□ -1.24
SRPRA-205ENST00000531104 C2orf82Q6UX34 121 aa7.29□□□□□ -1.24
SRPRA-205ENST00000531104 LOC107984156A0A0G2JMH3 177 aa7.28□□□□□ -1.24
SRPRA-205ENST00000531104 A0A0U1RRA0 63 aa7.28□□□□□ -1.24
SRPRA-205ENST00000531104 K7EP34 96 aa7.28□□□□□ -1.24
SRPRA-205ENST00000531104 FABP2P12104 132 aa7.28□□□□□ -1.24
SRPRA-205ENST00000531104 SPAG11BQ08648 103 aa7.28□□□□□ -1.24
SRPRA-205ENST00000531104 COX17Q14061 63 aa7.28□□□□□ -1.24
SRPRA-205ENST00000531104 CFAP161Q6P656 301 aa7.28□□□□□ -1.24
SRPRA-205ENST00000531104 ARL17AQ8IVW1 177 aa7.28□□□□□ -1.24
SRPRA-205ENST00000531104 MIR7-3HGQ8N6C7 128 aa7.28□□□□□ -1.24
SRPRA-205ENST00000531104 NTN5Q8WTR8 489 aaPredicted RBP7.28□□□□□ -1.24
SRPRA-205ENST00000531104 DYNC2H1Q8NCM8 4307 aaKnown RBP7.28□□□□□ -1.24
SRPRA-205ENST00000531104 GVQW2A0A096LPI5 108 aaPredicted RBP7.27□□□□□ -1.25
SRPRA-205ENST00000531104 CKS1BP61024 79 aa7.27□□□□□ -1.25
SRPRA-205ENST00000531104 NPC2P61916 151 aa7.27□□□□□ -1.25
SRPRA-205ENST00000531104 LINC00158P58513 81 aa7.26□□□□□ -1.25
SRPRA-205ENST00000531104 C6orf223Q8N319 242 aa7.26□□□□□ -1.25
SRPRA-205ENST00000531104 C15orf56Q8N910 161 aa7.26□□□□□ -1.25
SRPRA-205ENST00000531104 C1orf43Q9BWL3 253 aa7.26□□□□□ -1.25
SRPRA-205ENST00000531104 NUPR2A6NF83 97 aa7.25□□□□□ -1.25
SRPRA-205ENST00000531104 GAGE10A6NGK3 116 aa7.25□□□□□ -1.25
SRPRA-205ENST00000531104 F8WDY8 70 aa7.25□□□□□ -1.25
SRPRA-205ENST00000531104 C10orf25Q5T742 122 aa7.25□□□□□ -1.25
SRPRA-205ENST00000531104 UNQ6190/PRO20217Q6UXQ8 127 aa7.25□□□□□ -1.25
SRPRA-205ENST00000531104 GTF2H5Q6ZYL4 71 aa7.25□□□□□ -1.25
SRPRA-205ENST00000531104 MUC7Q8TAX7 377 aa7.25□□□□□ -1.25
SRPRA-205ENST00000531104 SPCS1Q9Y6A9 102 aa7.25□□□□□ -1.25
SRPRA-205ENST00000531104 PFN2P35080 140 aa7.24□□□□□ -1.25
SRPRA-205ENST00000531104 C2orf48Q96LS8 159 aa7.24□□□□□ -1.25
SRPRA-205ENST00000531104 DNHD1Q96M86 4753 aa7.23□□□□□ -1.25
SRPRA-205ENST00000531104 IGKV2D-24A0A075B6R9 120 aa7.23□□□□□ -1.25
SRPRA-205ENST00000531104 IGKV2-28A0A075B6P5 120 aa7.22□□□□□ -1.25
SRPRA-205ENST00000531104 TRBV30A0A0K0K1B3 111 aa7.22□□□□□ -1.25
SRPRA-205ENST00000531104 IGKV2D-28P01615 120 aa7.22□□□□□ -1.25
SRPRA-205ENST00000531104 C9orf116Q5BN46 136 aaPredicted RBP7.22□□□□□ -1.25
SRPRA-205ENST00000531104 RMI2Q96E14 147 aa7.22□□□□□ -1.25
SRPRA-205ENST00000531104 LINC00526Q96FQ7 95 aa7.22□□□□□ -1.25
SRPRA-205ENST00000531104 SND1-IT1Q9HBX3 110 aa7.22□□□□□ -1.25
SRPRA-205ENST00000531104 C6orf48Q9UBA6 75 aa7.22□□□□□ -1.25
SRPRA-205ENST00000531104 COL7A1Q02388 2944 aa7.22□□□□□ -1.25
SRPRA-205ENST00000531104 RPL13AP40429 203 aaKnown RBP7.21□□□□□ -1.26
SRPRA-205ENST00000531104 LYRM7Q5U5X0 104 aa7.21□□□□□ -1.26
SRPRA-205ENST00000531104 Q9HAA7 133 aa7.21□□□□□ -1.26
SRPRA-205ENST00000531104 ZNF561-AS1K7EIQ3 104 aa7.2□□□□□ -1.26
SRPRA-205ENST00000531104 NDUFC2O95298 119 aa7.2□□□□□ -1.26
SRPRA-205ENST00000531104 HIGD2BQ4VC39 106 aa7.2□□□□□ -1.26
SRPRA-205ENST00000531104 KRTAP1-5Q9BYS1 174 aa7.2□□□□□ -1.26
SRPRA-205ENST00000531104 DNAH1Q9P2D7 4330 aa7.2□□□□□ -1.26
SRPRA-205ENST00000531104 TRBV20-1A0A075B6N2 111 aa7.19□□□□□ -1.26
SRPRA-205ENST00000531104 TRAV13-2A0A0B4J235 113 aa7.19□□□□□ -1.26
SRPRA-205ENST00000531104 TRIAP1O43715 76 aa7.19□□□□□ -1.26
SRPRA-205ENST00000531104 CASC10Q5T4H9 136 aa7.19□□□□□ -1.26
SRPRA-205ENST00000531104 LINC00337Q8N6G1 96 aa7.19□□□□□ -1.26
SRPRA-205ENST00000531104 H7C2G1 150 aa7.18□□□□□ -1.26
SRPRA-205ENST00000531104 TCL1BO95988 128 aa7.18□□□□□ -1.26
SRPRA-205ENST00000531104 Q6ZRU5 148 aa7.18□□□□□ -1.26
SRPRA-205ENST00000531104 UBE2DNLQ8IWF7 75 aa7.18□□□□□ -1.26
SRPRA-205ENST00000531104 CAMK2N2Q96S95 79 aa7.18□□□□□ -1.26
SRPRA-205ENST00000531104 PRO0461Q9UI25 63 aa7.18□□□□□ -1.26
SRPRA-205ENST00000531104 PSMB2P49721 201 aa7.17□□□□□ -1.26
SRPRA-205ENST00000531104 Q1RN00 199 aa7.17□□□□□ -1.26
SRPRA-205ENST00000531104 RNF151Q2KHN1 245 aa7.17□□□□□ -1.26
SRPRA-205ENST00000531104 PRKDCP78527 4128 aaKnown RBP7.16□□□□□ -1.26
SRPRA-205ENST00000531104 USP17L23D6RBM5 183 aa7.16□□□□□ -1.26
SRPRA-205ENST00000531104 H3BMG7 143 aa7.16□□□□□ -1.26
SRPRA-205ENST00000531104 SCGB1C2P0DMR2 95 aa7.16□□□□□ -1.26
SRPRA-205ENST00000531104 RPL28P46779 137 aaKnown RBP7.16□□□□□ -1.26
SRPRA-205ENST00000531104 Q8NDZ9 215 aa7.16□□□□□ -1.26
SRPRA-205ENST00000531104 STAB2Q8WWQ8 2551 aa7.15□□□□□ -1.26
SRPRA-205ENST00000531104 DNAH7Q8WXX0 4024 aa7.15□□□□□ -1.26
SRPRA-205ENST00000531104 F8W1H4 67 aa7.15□□□□□ -1.26
SRPRA-205ENST00000531104 SLPIP03973 132 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms