RNA–Protein interactions for RNA: ENST00000530528.1

MKNK1-223, Transcript of MAP kinase interacting serine/threonine kinase 1, human

TSL 2

Gene MKNK1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MKNK1-223	ENST00000530528	HERVK_113	P63121	156 aa		10.38	□□□□□ -0.75
MKNK1-223	ENST00000530528	TOMM6	Q96B49	74 aa		10.38	□□□□□ -0.75
MKNK1-223	ENST00000530528	TIMM17A	Q99595	171 aa		10.38	□□□□□ -0.75
MKNK1-223	ENST00000530528	GEMIN7	Q9H840	131 aa	Known RBP	10.38	□□□□□ -0.75
MKNK1-223	ENST00000530528	C22orf24	Q9Y442	160 aa		10.38	□□□□□ -0.75
MKNK1-223	ENST00000530528	ADCYAP1	P18509	176 aa		10.36	□□□□□ -0.75
MKNK1-223	ENST00000530528	SEC11A	P67812	179 aa		10.36	□□□□□ -0.75
MKNK1-223	ENST00000530528	PAPPA-AS1	Q5QFB9	102 aa		10.36	□□□□□ -0.75
MKNK1-223	ENST00000530528		F8VRH5	84 aa		10.35	□□□□□ -0.75
MKNK1-223	ENST00000530528	SCGB3A1	Q96QR1	104 aa		10.35	□□□□□ -0.75
MKNK1-223	ENST00000530528	G0S2	P27469	103 aa		10.34	□□□□□ -0.75
MKNK1-223	ENST00000530528	CLLU1	Q5K131	121 aa		10.34	□□□□□ -0.75
MKNK1-223	ENST00000530528	SMIM1	B2RUZ4	78 aa		10.33	□□□□□ -0.76
MKNK1-223	ENST00000530528	ZNF861P	O60384	105 aa		10.33	□□□□□ -0.76
MKNK1-223	ENST00000530528	ERAS	Q7Z444	233 aa		10.33	□□□□□ -0.76
MKNK1-223	ENST00000530528	NUPR1	O60356	82 aa		10.32	□□□□□ -0.76
MKNK1-223	ENST00000530528	LBH	Q53QV2	105 aa	Predicted RBP	10.32	□□□□□ -0.76
MKNK1-223	ENST00000530528	CXCL5	P42830	114 aa		10.31	□□□□□ -0.76
MKNK1-223	ENST00000530528	COX7B2	Q8TF08	81 aa		10.31	□□□□□ -0.76
MKNK1-223	ENST00000530528	TINCR	A0A1B0GVN0	87 aa		10.3	□□□□□ -0.76
MKNK1-223	ENST00000530528	TMEM218	A2RU14	115 aa		10.3	□□□□□ -0.76
MKNK1-223	ENST00000530528	RPL13A	P40429	203 aa	Known RBP	10.3	□□□□□ -0.76
MKNK1-223	ENST00000530528	MRPL55	Q7Z7F7	128 aa	Known RBP	10.3	□□□□□ -0.76
MKNK1-223	ENST00000530528	TRAV9-1	A0A075B6T8	112 aa		10.29	□□□□□ -0.76
MKNK1-223	ENST00000530528	SPINK8	P0C7L1	97 aa		10.29	□□□□□ -0.76
MKNK1-223	ENST00000530528	PDZD11	Q5EBL8	140 aa		10.29	□□□□□ -0.76
MKNK1-223	ENST00000530528	TP73-AS1	Q9UF72	201 aa		10.29	□□□□□ -0.76
MKNK1-223	ENST00000530528	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.29	□□□□□ -0.76
MKNK1-223	ENST00000530528	IGLV5-45	A0A087WSX0	123 aa		10.28	□□□□□ -0.76
MKNK1-223	ENST00000530528	RPL37AP8	A6NKH3	93 aa		10.28	□□□□□ -0.76
MKNK1-223	ENST00000530528	PRR4	Q16378	134 aa		10.28	□□□□□ -0.76
MKNK1-223	ENST00000530528	LINC00167	Q96N53	147 aa		10.28	□□□□□ -0.76
MKNK1-223	ENST00000530528	CST9L	Q9H4G1	147 aa		10.28	□□□□□ -0.76
MKNK1-223	ENST00000530528	GAGE10	A6NGK3	116 aa		10.27	□□□□□ -0.77
MKNK1-223	ENST00000530528	LINC01546	A6NGU7	62 aa		10.27	□□□□□ -0.77
MKNK1-223	ENST00000530528	RAB5B	P61020	215 aa		10.27	□□□□□ -0.77
MKNK1-223	ENST00000530528	UQCC3	Q6UW78	93 aa		10.27	□□□□□ -0.77
MKNK1-223	ENST00000530528	GNB1L	Q9BYB4	327 aa		10.27	□□□□□ -0.77
MKNK1-223	ENST00000530528	BCE1	O60756	84 aa		10.26	□□□□□ -0.77
MKNK1-223	ENST00000530528	S100P	P25815	95 aa		10.25	□□□□□ -0.77
MKNK1-223	ENST00000530528	RPL28	P46779	137 aa	Known RBP	10.25	□□□□□ -0.77
MKNK1-223	ENST00000530528	IFITM2	Q01629	132 aa		10.25	□□□□□ -0.77
MKNK1-223	ENST00000530528	FA2H	Q7L5A8	372 aa		10.25	□□□□□ -0.77
MKNK1-223	ENST00000530528	TSPAN13	O95857	204 aa		10.24	□□□□□ -0.77
MKNK1-223	ENST00000530528	PMVK	Q15126	192 aa		10.24	□□□□□ -0.77
MKNK1-223	ENST00000530528	MRPL18	Q9H0U6	180 aa	Known RBP	10.24	□□□□□ -0.77
MKNK1-223	ENST00000530528		A0A087X002	238 aa		10.23	□□□□□ -0.77
MKNK1-223	ENST00000530528	LINC01549	A6NIU2	74 aa		10.23	□□□□□ -0.77
MKNK1-223	ENST00000530528	FABP9	Q0Z7S8	132 aa		10.23	□□□□□ -0.77
MKNK1-223	ENST00000530528	SEC11C	Q9BY50	192 aa		10.23	□□□□□ -0.77
MKNK1-223	ENST00000530528	SMCO4	Q9NRQ5	59 aa		10.23	□□□□□ -0.77
MKNK1-223	ENST00000530528	SCO1	O75880	301 aa		10.22	□□□□□ -0.77
MKNK1-223	ENST00000530528	IGLV5-37	A0A075B6J1	123 aa		10.21	□□□□□ -0.77
MKNK1-223	ENST00000530528	NKAPP1	Q8N9T2	125 aa		10.21	□□□□□ -0.77
MKNK1-223	ENST00000530528	ANAPC11	Q9NYG5	84 aa		10.21	□□□□□ -0.77
MKNK1-223	ENST00000530528		H3BRM9	83 aa		10.19	□□□□□ -0.78
MKNK1-223	ENST00000530528	NDUFA6	P56556	154 aa		10.19	□□□□□ -0.78
MKNK1-223	ENST00000530528	COX19	Q49B96	90 aa		10.19	□□□□□ -0.78
MKNK1-223	ENST00000530528	COMMD7	Q86VX2	200 aa		10.19	□□□□□ -0.78
MKNK1-223	ENST00000530528		A0A096LNJ9	63 aa		10.18	□□□□□ -0.78
MKNK1-223	ENST00000530528	ATP5L	O75964	103 aa		10.18	□□□□□ -0.78
MKNK1-223	ENST00000530528	IGLC3	P0DOY3	106 aa		10.18	□□□□□ -0.78
MKNK1-223	ENST00000530528	CRYGA	P11844	174 aa		10.18	□□□□□ -0.78
MKNK1-223	ENST00000530528	PFN2	P35080	140 aa		10.18	□□□□□ -0.78
MKNK1-223	ENST00000530528	UBE2A	P49459	152 aa		10.18	□□□□□ -0.78
MKNK1-223	ENST00000530528	KRTAP13-1	Q8IUC0	172 aa		10.18	□□□□□ -0.78
MKNK1-223	ENST00000530528	TYMSOS	Q8TAI1	123 aa		10.18	□□□□□ -0.78
MKNK1-223	ENST00000530528	IGKV2-28	A0A075B6P5	120 aa		10.17	□□□□□ -0.78
MKNK1-223	ENST00000530528	IGKV2D-28	P01615	120 aa		10.17	□□□□□ -0.78
MKNK1-223	ENST00000530528	URB1-AS1	Q96HZ7	61 aa		10.17	□□□□□ -0.78
MKNK1-223	ENST00000530528	RPS10P5	Q9NQ39	176 aa		10.17	□□□□□ -0.78
MKNK1-223	ENST00000530528	IGLV5-39	A0A0G2JS06	123 aa		10.16	□□□□□ -0.78
MKNK1-223	ENST00000530528	ZNF22	P17026	224 aa	Predicted RBP	10.16	□□□□□ -0.78
MKNK1-223	ENST00000530528	PMCHL1	Q16048	86 aa		10.15	□□□□□ -0.78
MKNK1-223	ENST00000530528	KRTAP13-2	Q52LG2	175 aa		10.15	□□□□□ -0.78
MKNK1-223	ENST00000530528	C10orf91	Q5T1B1	145 aa		10.14	□□□□□ -0.79
MKNK1-223	ENST00000530528	MUC2	Q02817	5179 aa		10.13	□□□□□ -0.79
MKNK1-223	ENST00000530528	VPREB1	P12018	145 aa		10.13	□□□□□ -0.79
MKNK1-223	ENST00000530528	RHEB	Q15382	184 aa		10.13	□□□□□ -0.79
MKNK1-223	ENST00000530528	C18orf32	Q8TCD1	76 aa		10.13	□□□□□ -0.79
MKNK1-223	ENST00000530528	ZNF625	Q96I27	306 aa	Predicted RBP	10.13	□□□□□ -0.79
MKNK1-223	ENST00000530528	SND1-IT1	Q9HBX3	110 aa		10.13	□□□□□ -0.79
MKNK1-223	ENST00000530528	ERG28	Q9UKR5	140 aa		10.13	□□□□□ -0.79
MKNK1-223	ENST00000530528	LINC00614	P0C842	121 aa		10.12	□□□□□ -0.79
MKNK1-223	ENST00000530528	PRLH	P81277	87 aa		10.12	□□□□□ -0.79
MKNK1-223	ENST00000530528	TRAPPC1	Q9Y5R8	145 aa		10.12	□□□□□ -0.79
MKNK1-223	ENST00000530528	C11orf86	A6NJI1	115 aa		10.11	□□□□□ -0.79
MKNK1-223	ENST00000530528	TMEM238	C9JI98	176 aa		10.11	□□□□□ -0.79
MKNK1-223	ENST00000530528	HBD	P02042	147 aa		10.11	□□□□□ -0.79
MKNK1-223	ENST00000530528		Q8NDZ9	215 aa		10.11	□□□□□ -0.79
MKNK1-223	ENST00000530528	FAM19A1	Q7Z5A9	133 aa		10.1	□□□□□ -0.79
MKNK1-223	ENST00000530528	TMEM170B	Q5T4T1	132 aa		10.09	□□□□□ -0.79
MKNK1-223	ENST00000530528	BAGE3	Q86Y29	109 aa		10.09	□□□□□ -0.79
MKNK1-223	ENST00000530528	TMEM126A	Q9H061	195 aa		10.09	□□□□□ -0.79
MKNK1-223	ENST00000530528	FAM229B	Q4G0N7	80 aa		10.08	□□□□□ -0.8
MKNK1-223	ENST00000530528	RETNLB	Q9BQ08	111 aa		10.08	□□□□□ -0.8
MKNK1-223	ENST00000530528	RPL24	P83731	157 aa	Known RBP	10.07	□□□□□ -0.8
MKNK1-223	ENST00000530528	COX17	Q14061	63 aa		10.07	□□□□□ -0.8
MKNK1-223	ENST00000530528		M0R378	163 aa		10.06	□□□□□ -0.8
MKNK1-223	ENST00000530528	LINC00304	Q8N9R0	145 aa		10.06	□□□□□ -0.8

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